| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71907831
Identifier: 71907831
GI number: 71907831
Start: 2384996
End: 2386369
Strand: Reverse
Name: 71907831
Synonym: Daro_2209
Alternate gene names: NA
Gene position: 2386369-2384996 (Counterclockwise)
Preceding gene: 71907832
Following gene: 71907830
Centisome position: 53.02
GC content: 61.28
Gene sequence:
>1374_bases ATGAATCGACACCTTCTTGTGGGCCGGTATGGTCCCGACGATCAGATTTCGATTCCCGGTGCGTCCGATGAACAGGTGAC TGACCTGCAACTCGTGTCCGGCGAAAAATCGCTGGACCACGGCATTGGCGGGGCTCTAACCAGTTTGAAGGCCCTGGGCG TGCACCCCACGGAGATCGGGTTGGACTTGCTGGTGCTTGCCGCGCACGTGCATGCTGCTGACACGCGCATCTCCAGGGCT GAACAGTCACAAGATTCTTGGACGCGCGAAATCCGTCTTGTCGTGCCCGTGAGTGACCCCAATCGGTGGAATGCTGCCGC GCAGACCGTGAAGCGAACGTTGGATTTTCTGACCGGGGATCGCTGGACGATTGGCTTTCGTCAACGTCCCGAACGTTTCG CTGAAATCATCACGCCACCAGAAACGCTGTTGCCCCCGGGCTTCGATGCGGTCAGCCTCTTCTCTGGCGGCTTGGATAGC CTGATTGGAGCCATCGACCTCTTGGAAGCGGGGCGCACACCATTGCTGGTAAGCCATGCGGGAGAAGGCGCGACCAGCGA TGCCCAGAATGTGCTCTTCGCTGCACTGAAGAAGCACTTCAGCGCAGTCGCCTTTGATCGCCTCAGAGTTTGGATGCTCT TTCCGGCCGACCTGGTTCAGGGCGTGAGTTCCGAGAACTCAACTCGCGGGCGTTCGTTCCTGTTTTTCGCACTCGGCGTA TTCGCCGGAACCGGGCTTGGGACGGACTTCGTGCTCCGCGTGCCGGAGAACGGACTGATCGCATTGAATGTCCCCTTGGA CCCGCTGCGCCTCGGCTCGAACAGCACTCGGACCACACATCCGTACTACATCGCGCGGTGGAATGACCTCTTGGGCCACC TCGGCATATCCGGCCGTGTCGAGAACCCGTACTGGGCCAAGACCAAGGGCGAGATGGCTTCGGCCTGCGCGAATCCTGTG CTGCTGAAGGCGCTCGCTCCATATGCGCTGTCGTGCGCTCACGCTGCGAATGCTCGGCACCTGGGCATCAAGGGCCGCGG CATCGAACAGTGCGGGTACTGTCTGCCGTGCCTGATTCGTCGCGCCGCGTTGGATGCTGCCTGGGGGCGTGGCAATGACA CGACCCCATACACCTTGCCGGACCTGCGAGCCCACCCGCTGGGCACGCGCGAATCCAACGGACAACAGGTGCGGTCATTT CAGTTTGCGATAGAGCGCCTCCGCACCGCACCGCACTTGGCGAAATTGCTGATCCATAAGCCCGGGTCGCTCGCCGATGA GGCCTTGCGACTCGATCAACTCGCCGCCGTTTACCAGCGTGGTCTTGCCGAAGTCGCCCAGCTGATAGAGGGCGTGGAAA CGACGCCAGGATAG
Upstream 100 bases:
>100_bases CACCAACTCTCACGCAGGACCGCGTGCACGCATTTGTCGACACGGTTTATGAACGTGCCTTTGGCATCTTGCAGGCACTC GGAGACGCGGAGGCAGACCA
Downstream 100 bases:
>100_bases GTTACGTATGAGTACAAGCAACGGTCTCGTGGACTTTCATTGCCACCTTGATCTCTACCCGGATCATCAGGCTGCGGTGA TGGATGCAGAAGAAGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNRHLLVGRYGPDDQISIPGASDEQVTDLQLVSGEKSLDHGIGGALTSLKALGVHPTEIGLDLLVLAAHVHAADTRISRA EQSQDSWTREIRLVVPVSDPNRWNAAAQTVKRTLDFLTGDRWTIGFRQRPERFAEIITPPETLLPPGFDAVSLFSGGLDS LIGAIDLLEAGRTPLLVSHAGEGATSDAQNVLFAALKKHFSAVAFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGV FAGTGLGTDFVLRVPENGLIALNVPLDPLRLGSNSTRTTHPYYIARWNDLLGHLGISGRVENPYWAKTKGEMASACANPV LLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIRRAALDAAWGRGNDTTPYTLPDLRAHPLGTRESNGQQVRSF QFAIERLRTAPHLAKLLIHKPGSLADEALRLDQLAAVYQRGLAEVAQLIEGVETTPG
Sequences:
>Translated_457_residues MNRHLLVGRYGPDDQISIPGASDEQVTDLQLVSGEKSLDHGIGGALTSLKALGVHPTEIGLDLLVLAAHVHAADTRISRA EQSQDSWTREIRLVVPVSDPNRWNAAAQTVKRTLDFLTGDRWTIGFRQRPERFAEIITPPETLLPPGFDAVSLFSGGLDS LIGAIDLLEAGRTPLLVSHAGEGATSDAQNVLFAALKKHFSAVAFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGV FAGTGLGTDFVLRVPENGLIALNVPLDPLRLGSNSTRTTHPYYIARWNDLLGHLGISGRVENPYWAKTKGEMASACANPV LLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIRRAALDAAWGRGNDTTPYTLPDLRAHPLGTRESNGQQVRSF QFAIERLRTAPHLAKLLIHKPGSLADEALRLDQLAAVYQRGLAEVAQLIEGVETTPG >Mature_457_residues MNRHLLVGRYGPDDQISIPGASDEQVTDLQLVSGEKSLDHGIGGALTSLKALGVHPTEIGLDLLVLAAHVHAADTRISRA EQSQDSWTREIRLVVPVSDPNRWNAAAQTVKRTLDFLTGDRWTIGFRQRPERFAEIITPPETLLPPGFDAVSLFSGGLDS LIGAIDLLEAGRTPLLVSHAGEGATSDAQNVLFAALKKHFSAVAFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGV FAGTGLGTDFVLRVPENGLIALNVPLDPLRLGSNSTRTTHPYYIARWNDLLGHLGISGRVENPYWAKTKGEMASACANPV LLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIRRAALDAAWGRGNDTTPYTLPDLRAHPLGTRESNGQQVRSF QFAIERLRTAPHLAKLLIHKPGSLADEALRLDQLAAVYQRGLAEVAQLIEGVETTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49422; Mature: 49422
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHLLVGRYGPDDQISIPGASDEQVTDLQLVSGEKSLDHGIGGALTSLKALGVHPTEIG CCCCEEEEECCCCCCEECCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHCCCHHHHH LDLLVLAAHVHAADTRISRAEQSQDSWTREIRLVVPVSDPNRWNAAAQTVKRTLDFLTGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC RWTIGFRQRPERFAEIITPPETLLPPGFDAVSLFSGGLDSLIGAIDLLEAGRTPLLVSHA CEEECHHHCHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEC GEGATSDAQNVLFAALKKHFSAVAFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCHHHHHHHHHH FAGTGLGTDFVLRVPENGLIALNVPLDPLRLGSNSTRTTHPYYIARWNDLLGHLGISGRV HHCCCCCCCEEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCC ENPYWAKTKGEMASACANPVLLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIR CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCHHHHHHH RAALDAAWGRGNDTTPYTLPDLRAHPLGTRESNGQQVRSFQFAIERLRTAPHLAKLLIHK HHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCC PGSLADEALRLDQLAAVYQRGLAEVAQLIEGVETTPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRHLLVGRYGPDDQISIPGASDEQVTDLQLVSGEKSLDHGIGGALTSLKALGVHPTEIG CCCCEEEEECCCCCCEECCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHCCCHHHHH LDLLVLAAHVHAADTRISRAEQSQDSWTREIRLVVPVSDPNRWNAAAQTVKRTLDFLTGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC RWTIGFRQRPERFAEIITPPETLLPPGFDAVSLFSGGLDSLIGAIDLLEAGRTPLLVSHA CEEECHHHCHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEC GEGATSDAQNVLFAALKKHFSAVAFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCHHHHHHHHHH FAGTGLGTDFVLRVPENGLIALNVPLDPLRLGSNSTRTTHPYYIARWNDLLGHLGISGRV HHCCCCCCCEEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCC ENPYWAKTKGEMASACANPVLLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIR CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCHHHHHHH RAALDAAWGRGNDTTPYTLPDLRAHPLGTRESNGQQVRSFQFAIERLRTAPHLAKLLIHK HHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCC PGSLADEALRLDQLAAVYQRGLAEVAQLIEGVETTPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA