| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907832
Identifier: 71907832
GI number: 71907832
Start: 2386366
End: 2387253
Strand: Reverse
Name: 71907832
Synonym: Daro_2210
Alternate gene names: NA
Gene position: 2387253-2386366 (Counterclockwise)
Preceding gene: 71907833
Following gene: 71907831
Centisome position: 53.04
GC content: 65.32
Gene sequence:
>888_bases ATGGGAACCTCAACAGCATACGGCGGACCAGGAGGGGGCACGCCGCTCGTGCCGTCATGGCTCGGTTCGGACGATGATGC GGGCGGGCCGGCCCCACCAGCTACTCCACCCGCAGGGGCACCGGCAGATGATCCGGCCAGTCCCGCGCCACTGCCACCGG CGCCGCCAGTCCGACCGGCTATTCCGACACCGGCGGACAGTAGTCGGTTCACCGCGCCGCGTAGCAATTTCACCCGCTTC GCGCACTCTGGTGGCGGCGATCGCGCGAGCTTGGGGCGCGCGGTCTCAGGGTATGTATCCAAGTCCTCGGGTGGGGCGCG GCAGGCGGCTCAGCGTATGGGCGCCTCGCGTGGTTCCGGCGCCCGGCTGCTCGGCTTCTTGGCGGACGTACAGGCTCGCG GCGCAACCGAGGCGCTGCGCTCTTTGGATCTCGAAGGGCTGGCGGGCCGCCCGATCGACGAAGTATTCATGGGGTTGGCC GACTACATCTGCCCGAACGCTGGTACGGTCGACGAAGGTATTGCAAGGGAGGCGTTCATCGAGACGATCGTGGACCTGAG CACGTTGGGCGTGACCGACCTGGATGCACTCAGCCCTGACCAGATGCAAACGGTTTTCGAGTTGTACGCAACCCGCGCAA TCGAGGCCCGACTGTGCAATGACATAGGTACCAAGCTGGTCACCGCGCCGGCCGACCCGCAGGTAGCGCTGCGTGTTCAG AGCCAGTTGCGCGACTTCATCCGCAATGGCGTCAGCGATGCTTTGACGGCCGCGCGTGCTGAAACACCAACTCTCACGCA GGACCGCGTGCACGCATTTGTCGACACGGTTTATGAACGTGCCTTTGGCATCTTGCAGGCACTCGGAGACGCGGAGGCAG ACCAATGA
Upstream 100 bases:
>100_bases GAATGGCTCAGTTGGTCGTCGGGTGGGCAACGCAGTCCGACAACAAGATGCTAAGGGCCGCTGCCGAGGCTGCGAATAAG ACACAAAAGGGAGGCAGATA
Downstream 100 bases:
>100_bases ATCGACACCTTCTTGTGGGCCGGTATGGTCCCGACGATCAGATTTCGATTCCCGGTGCGTCCGATGAACAGGTGACTGAC CTGCAACTCGTGTCCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGTSTAYGGPGGGTPLVPSWLGSDDDAGGPAPPATPPAGAPADDPASPAPLPPAPPVRPAIPTPADSSRFTAPRSNFTRF AHSGGGDRASLGRAVSGYVSKSSGGARQAAQRMGASRGSGARLLGFLADVQARGATEALRSLDLEGLAGRPIDEVFMGLA DYICPNAGTVDEGIAREAFIETIVDLSTLGVTDLDALSPDQMQTVFELYATRAIEARLCNDIGTKLVTAPADPQVALRVQ SQLRDFIRNGVSDALTAARAETPTLTQDRVHAFVDTVYERAFGILQALGDAEADQ
Sequences:
>Translated_295_residues MGTSTAYGGPGGGTPLVPSWLGSDDDAGGPAPPATPPAGAPADDPASPAPLPPAPPVRPAIPTPADSSRFTAPRSNFTRF AHSGGGDRASLGRAVSGYVSKSSGGARQAAQRMGASRGSGARLLGFLADVQARGATEALRSLDLEGLAGRPIDEVFMGLA DYICPNAGTVDEGIAREAFIETIVDLSTLGVTDLDALSPDQMQTVFELYATRAIEARLCNDIGTKLVTAPADPQVALRVQ SQLRDFIRNGVSDALTAARAETPTLTQDRVHAFVDTVYERAFGILQALGDAEADQ >Mature_294_residues GTSTAYGGPGGGTPLVPSWLGSDDDAGGPAPPATPPAGAPADDPASPAPLPPAPPVRPAIPTPADSSRFTAPRSNFTRFA HSGGGDRASLGRAVSGYVSKSSGGARQAAQRMGASRGSGARLLGFLADVQARGATEALRSLDLEGLAGRPIDEVFMGLAD YICPNAGTVDEGIAREAFIETIVDLSTLGVTDLDALSPDQMQTVFELYATRAIEARLCNDIGTKLVTAPADPQVALRVQS QLRDFIRNGVSDALTAARAETPTLTQDRVHAFVDTVYERAFGILQALGDAEADQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30369; Mature: 30238
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSTAYGGPGGGTPLVPSWLGSDDDAGGPAPPATPPAGAPADDPASPAPLPPAPPVRPA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IPTPADSSRFTAPRSNFTRFAHSGGGDRASLGRAVSGYVSKSSGGARQAAQRMGASRGSG CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC ARLLGFLADVQARGATEALRSLDLEGLAGRPIDEVFMGLADYICPNAGTVDEGIAREAFI HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ETIVDLSTLGVTDLDALSPDQMQTVFELYATRAIEARLCNDIGTKLVTAPADPQVALRVQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH SQLRDFIRNGVSDALTAARAETPTLTQDRVHAFVDTVYERAFGILQALGDAEADQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GTSTAYGGPGGGTPLVPSWLGSDDDAGGPAPPATPPAGAPADDPASPAPLPPAPPVRPA CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IPTPADSSRFTAPRSNFTRFAHSGGGDRASLGRAVSGYVSKSSGGARQAAQRMGASRGSG CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC ARLLGFLADVQARGATEALRSLDLEGLAGRPIDEVFMGLADYICPNAGTVDEGIAREAFI HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ETIVDLSTLGVTDLDALSPDQMQTVFELYATRAIEARLCNDIGTKLVTAPADPQVALRVQ HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH SQLRDFIRNGVSDALTAARAETPTLTQDRVHAFVDTVYERAFGILQALGDAEADQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA