Click here to switch to the map view.

The map label for this gene is 71907817

Identifier: 71907817

GI number: 71907817

Start: 2371391

End: 2371753

Strand: Reverse

Name: 71907817

Synonym: Daro_2195

Alternate gene names: NA

Gene position: 2371753-2371391 (Counterclockwise)

Preceding gene: 71907818

Following gene: 71907816

Centisome position: 52.69

GC content: 57.85

Gene sequence:

>363_bases
ATGAGTGAAGCAAAACCCGCTCCCCAGCGCCCGAGCGTTCTCTCGCTGAACATCAATTCAAAATCCGCGCTTTATGCTGC
GTTTATGCCGCATTTGCGAGCTGGTGGTATCTTTATTCCGACGACCAGAGGCTACAAGATCGGCGACGAAGTGTTCATGC
TTCTTTCGTTGATGGACGACCCGGCCAAGCTGCCAATCGCCGGCACTGTGGTCTGGATTACTCCGGCGGGGGCCCAGAAT
GGTCGGGCGCAGGGTATCGGCGTGCATTTCAACAATGACGAAAGCGGTCAGGAAGCGCGGCGCAAGATCGAAGGCCTGCT
CGGCGGTGTCATGCAATCTGCACGGCCGACGCACACGCTCTGA

Upstream 100 bases:

>100_bases
AATATCGCGCCGCCAGGAGGCCGAGCAGCCGCTAAATGCGCGCCTCTTTCTGGAAGGCCTCTTTCTGGATTATCGAGCCC
TGTTTGCCAATTGATCAACG

Downstream 100 bases:

>100_bases
TCAGCCATCATGCTGGTCGACTCCCACTGCCATCTCGATTTTCCTGATCTGGCCAATCGCCTGCCTGATGTGCTTCGGCA
CATGCAGGACAACCAGGTTG

Product: Type IV pilus assembly PilZ

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilZ; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein PilZ; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; DNA Polymerase-Related Protein; Tfp Pilus Assembly Protein; TYPE 4 Pilus Assembly Protein

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSEAKPAPQRPSVLSLNINSKSALYAAFMPHLRAGGIFIPTTRGYKIGDEVFMLLSLMDDPAKLPIAGTVVWITPAGAQN
GRAQGIGVHFNNDESGQEARRKIEGLLGGVMQSARPTHTL

Sequences:

>Translated_120_residues
MSEAKPAPQRPSVLSLNINSKSALYAAFMPHLRAGGIFIPTTRGYKIGDEVFMLLSLMDDPAKLPIAGTVVWITPAGAQN
GRAQGIGVHFNNDESGQEARRKIEGLLGGVMQSARPTHTL
>Mature_119_residues
SEAKPAPQRPSVLSLNINSKSALYAAFMPHLRAGGIFIPTTRGYKIGDEVFMLLSLMDDPAKLPIAGTVVWITPAGAQNG
RAQGIGVHFNNDESGQEARRKIEGLLGGVMQSARPTHTL

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12826; Mature: 12695

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAKPAPQRPSVLSLNINSKSALYAAFMPHLRAGGIFIPTTRGYKIGDEVFMLLSLMDD
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC
PAKLPIAGTVVWITPAGAQNGRAQGIGVHFNNDESGQEARRKIEGLLGGVMQSARPTHTL
CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SEAKPAPQRPSVLSLNINSKSALYAAFMPHLRAGGIFIPTTRGYKIGDEVFMLLSLMDD
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC
PAKLPIAGTVVWITPAGAQNGRAQGIGVHFNNDESGQEARRKIEGLLGGVMQSARPTHTL
CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA