| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907798
Identifier: 71907798
GI number: 71907798
Start: 2349887
End: 2351371
Strand: Reverse
Name: 71907798
Synonym: Daro_2176
Alternate gene names: NA
Gene position: 2351371-2349887 (Counterclockwise)
Preceding gene: 71907799
Following gene: 71907797
Centisome position: 52.24
GC content: 56.09
Gene sequence:
>1485_bases ATGAGCGCGCAGGCTGCAGTTGCCTCCGCGCCGGCCAATGCTCGCGAATCGGGCCTGCTCGACCAGATCATCGAAGAGAG CCGTGTCGCCCAGTCCGATCAGGAAAAGAACCGGGCCCGCGACATTATCAGCGAACTGGTCAATCAGGTGCTGGATGGCG AAGTGGTTGTTTCCGAGAATCTGGCAGCATCCCTCGATGCCCGCGTGGCCGAACTCGATCGCCTGATTTCCGAGCAGCTA AGTGAAGTGATGCATGCTCCTGAATTCCAAGCCCTCGAAAGTGCCTGGACCGGTCTGCATTACCTTTGCAAGCAGACCTC GACTGGCCAGCAACTCAAGATCAAGCTGTTCAACGCTTCGAAGCGCGAATTGGTCAAAGATTTCAAGACAGCCATCGATT TCGACCAGAGCGCCTTGTTCAAGAAGGTTTATGAAGAAGAATTCGGCACTTTCGGTGGTGCGCCGTTTGGTACCTTGATC GGTCAGTACGAAATCAGCCGTCAGCCCGAGGATATGTACTTCGTCGAACAGATGTCGCATATCGCCGCTGCCTCGCATGC GCCGTTCATTGCTTCCGCCGCGCCGCAGTTGTTCGGCCTGGAGTCACATACCGAACTCGGCAAGCCGCGCGACATGGGCA AGGTGTTCGATACCGTCGAATACGCCAAGTGGAAGTCCTTCCGTGAGTCCGAGGATTCGCGCTATGTCGGTCTCGCCTTG CCACGCTTCCTCGGCCGATTGCCCTATAACCCGATTGATGGCGAAGTCACTGAGGGCTTCAATTTTGTTGAAGAGGTTGA TGGTACTGATCACGACAAGTACCTCTGGTGCAATGCCGCCTTTGCCTTTGCGGCCCGTCTGACCGATGCCTTCGAGAACT ATGGCTGGTGTGCCGCGATTCGCGGCGTTGAAGGTGGTGGCCTGGTTGAAGATCTGCCGACGCACACCTTCCGCACCGAC GACGGTGAAGTAGCACTCAAGTGCCCGACGGAAATTTCGATTACCGATCGTCGCGAAAAAGAGTTGAGCGATCTTGGCTT CATCCCGCTGGTTCATTGCAAGAACACAGATTACGCGGCGTTCTTTGGCGCGCAATCAGCGCAGAAGGCAAGAAAGTACG ATACCGACTCGGCCAATGCCAATGCTTCGCTGTCCGCCCAGTTGCAATACATGTTTGCTGTGTCCCGTATCGCTCATTAC ATGAAGGCGATGATGCGCGACAAGATCGGCAGCTTTGCTTCCGCGGCCAATGTGCAGAACTATCTGCAGCGATGGATTGA TCAGTATGTAACCGCCGACGATTCCGCTTCCCAGGAAACCAAGGCGCAATTCCCGCTGCGCGAGGCTTCCGTGGAAGTCA GCGAAGTGCCGGGTCGCCCTGGTGTTTATCGGGCCGTGTCGTTTATCCGGCCACATTTCCAGCTGGATGAGCTTTCGGTA TCGCTGCGTCTGGTTGCCGAGTTGCCGCAATCGACCAAGAGCTAA
Upstream 100 bases:
>100_bases TGGCCGGCAATGAAAAGCTTGAAGATCTGCTGAATGATGTCCTGAACAGCACCGAGCAGTTGCAGAGTCTGGGCGGCAAG ACGAACGCAGGAGACGGACA
Downstream 100 bases:
>100_bases GCGTTGTTTAACCTCCAAGGAGAAAGTAAGAAATGAAGGATATTTACGTCGAATTCAAGGGTAGTGACATCAAGGGCGAT TCCCGCGATGCCAAGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSAQAAVASAPANARESGLLDQIIEESRVAQSDQEKNRARDIISELVNQVLDGEVVVSENLAASLDARVAELDRLISEQL SEVMHAPEFQALESAWTGLHYLCKQTSTGQQLKIKLFNASKRELVKDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGTLI GQYEISRQPEDMYFVEQMSHIAAASHAPFIASAAPQLFGLESHTELGKPRDMGKVFDTVEYAKWKSFRESEDSRYVGLAL PRFLGRLPYNPIDGEVTEGFNFVEEVDGTDHDKYLWCNAAFAFAARLTDAFENYGWCAAIRGVEGGGLVEDLPTHTFRTD DGEVALKCPTEISITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKARKYDTDSANANASLSAQLQYMFAVSRIAHY MKAMMRDKIGSFASAANVQNYLQRWIDQYVTADDSASQETKAQFPLREASVEVSEVPGRPGVYRAVSFIRPHFQLDELSV SLRLVAELPQSTKS
Sequences:
>Translated_494_residues MSAQAAVASAPANARESGLLDQIIEESRVAQSDQEKNRARDIISELVNQVLDGEVVVSENLAASLDARVAELDRLISEQL SEVMHAPEFQALESAWTGLHYLCKQTSTGQQLKIKLFNASKRELVKDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGTLI GQYEISRQPEDMYFVEQMSHIAAASHAPFIASAAPQLFGLESHTELGKPRDMGKVFDTVEYAKWKSFRESEDSRYVGLAL PRFLGRLPYNPIDGEVTEGFNFVEEVDGTDHDKYLWCNAAFAFAARLTDAFENYGWCAAIRGVEGGGLVEDLPTHTFRTD DGEVALKCPTEISITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKARKYDTDSANANASLSAQLQYMFAVSRIAHY MKAMMRDKIGSFASAANVQNYLQRWIDQYVTADDSASQETKAQFPLREASVEVSEVPGRPGVYRAVSFIRPHFQLDELSV SLRLVAELPQSTKS >Mature_493_residues SAQAAVASAPANARESGLLDQIIEESRVAQSDQEKNRARDIISELVNQVLDGEVVVSENLAASLDARVAELDRLISEQLS EVMHAPEFQALESAWTGLHYLCKQTSTGQQLKIKLFNASKRELVKDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGTLIG QYEISRQPEDMYFVEQMSHIAAASHAPFIASAAPQLFGLESHTELGKPRDMGKVFDTVEYAKWKSFRESEDSRYVGLALP RFLGRLPYNPIDGEVTEGFNFVEEVDGTDHDKYLWCNAAFAFAARLTDAFENYGWCAAIRGVEGGGLVEDLPTHTFRTDD GEVALKCPTEISITDRREKELSDLGFIPLVHCKNTDYAAFFGAQSAQKARKYDTDSANANASLSAQLQYMFAVSRIAHYM KAMMRDKIGSFASAANVQNYLQRWIDQYVTADDSASQETKAQFPLREASVEVSEVPGRPGVYRAVSFIRPHFQLDELSVS LRLVAELPQSTKS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54925; Mature: 54794
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQAAVASAPANARESGLLDQIIEESRVAQSDQEKNRARDIISELVNQVLDGEVVVSEN CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC LAASLDARVAELDRLISEQLSEVMHAPEFQALESAWTGLHYLCKQTSTGQQLKIKLFNAS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH KRELVKDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGTLIGQYEISRQPEDMYFVEQMSH HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH IAAASHAPFIASAAPQLFGLESHTELGKPRDMGKVFDTVEYAKWKSFRESEDSRYVGLAL HHHHCCCCHHHHCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH PRFLGRLPYNPIDGEVTEGFNFVEEVDGTDHDKYLWCNAAFAFAARLTDAFENYGWCAAI HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEE RGVEGGGLVEDLPTHTFRTDDGEVALKCPTEISITDRREKELSDLGFIPLVHCKNTDYAA CCCCCCCCHHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHH FFGAQSAQKARKYDTDSANANASLSAQLQYMFAVSRIAHYMKAMMRDKIGSFASAANVQN HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLQRWIDQYVTADDSASQETKAQFPLREASVEVSEVPGRPGVYRAVSFIRPHFQLDELSV HHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHH SLRLVAELPQSTKS HHHHHHHHHHCCCC >Mature Secondary Structure SAQAAVASAPANARESGLLDQIIEESRVAQSDQEKNRARDIISELVNQVLDGEVVVSEN CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC LAASLDARVAELDRLISEQLSEVMHAPEFQALESAWTGLHYLCKQTSTGQQLKIKLFNAS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH KRELVKDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGTLIGQYEISRQPEDMYFVEQMSH HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH IAAASHAPFIASAAPQLFGLESHTELGKPRDMGKVFDTVEYAKWKSFRESEDSRYVGLAL HHHHCCCCHHHHCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH PRFLGRLPYNPIDGEVTEGFNFVEEVDGTDHDKYLWCNAAFAFAARLTDAFENYGWCAAI HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEE RGVEGGGLVEDLPTHTFRTDDGEVALKCPTEISITDRREKELSDLGFIPLVHCKNTDYAA CCCCCCCCHHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHH FFGAQSAQKARKYDTDSANANASLSAQLQYMFAVSRIAHYMKAMMRDKIGSFASAANVQN HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLQRWIDQYVTADDSASQETKAQFPLREASVEVSEVPGRPGVYRAVSFIRPHFQLDELSV HHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHH SLRLVAELPQSTKS HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA