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The map label for this gene is 71907797

Identifier: 71907797

GI number: 71907797

Start: 2349318

End: 2349854

Strand: Reverse

Name: 71907797

Synonym: Daro_2175

Alternate gene names: NA

Gene position: 2349854-2349318 (Counterclockwise)

Preceding gene: 71907798

Following gene: 71907796

Centisome position: 52.21

GC content: 55.12

Gene sequence:

>537_bases
ATGAAGGATATTTACGTCGAATTCAAGGGTAGTGACATCAAGGGCGATTCCCGCGATGCCAAGCACAAGGACACGGTTGA
GGTTTACAGCTGGAGCCACACCATGCGCCAGCCGAAGTCGGCAACGGCATCGGCTGCTGGCGGCCATACTGCCGAGCGCG
TCGAACACGGCGAAATGATCTTTACCAAGGATATCGACGGTTCCAGCCCGAAGCTGTATCAGGCTTGTTCGTCCGGCCTG
GTGGTCAGCGATGTCATCATCTACTTCTACCGCGCTTTCGGTGGTCAGAATACGACCGGCAATCCGTCGGCTACCCAGAA
TCGTCATCAGTACCTGAAGATCGAACTGAAGAATGTCATCATCGCCTCGGTTTCCCCGGCTGTTGATGAGGAAGGCATTC
CCAAGGAAAGTTTCTCGCTGAAGTATTCCGCCGTGAAGTGGACCTACGACGAGCTGAACATCGACGGTACCAAGTCCGGC
AAGGTCAATATCCAGGGCGCCTGGAACCTGGCCAAGAACACGCCGAATCTGACCTGA

Upstream 100 bases:

>100_bases
TCCAGCTGGATGAGCTTTCGGTATCGCTGCGTCTGGTTGCCGAGTTGCCGCAATCGACCAAGAGCTAAGCGTTGTTTAAC
CTCCAAGGAGAAAGTAAGAA

Downstream 100 bases:

>100_bases
TAATCATTTTTGTGGAATCCACGGCGGAAACTCGTTTCCGCCTTTTTTATGATCAAAGGTTTTGAGCCTTCCCTGTTCGA
TAAATTATTCGACGATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Effector Hcp1 Family; Type VI Secretion System Effector Hcp1 Family Protein; Type VI Secretion System Protein; Secretion System Protein Hemolysin-Coregulated Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKDIYVEFKGSDIKGDSRDAKHKDTVEVYSWSHTMRQPKSATASAAGGHTAERVEHGEMIFTKDIDGSSPKLYQACSSGL
VVSDVIIYFYRAFGGQNTTGNPSATQNRHQYLKIELKNVIIASVSPAVDEEGIPKESFSLKYSAVKWTYDELNIDGTKSG
KVNIQGAWNLAKNTPNLT

Sequences:

>Translated_178_residues
MKDIYVEFKGSDIKGDSRDAKHKDTVEVYSWSHTMRQPKSATASAAGGHTAERVEHGEMIFTKDIDGSSPKLYQACSSGL
VVSDVIIYFYRAFGGQNTTGNPSATQNRHQYLKIELKNVIIASVSPAVDEEGIPKESFSLKYSAVKWTYDELNIDGTKSG
KVNIQGAWNLAKNTPNLT
>Mature_178_residues
MKDIYVEFKGSDIKGDSRDAKHKDTVEVYSWSHTMRQPKSATASAAGGHTAERVEHGEMIFTKDIDGSSPKLYQACSSGL
VVSDVIIYFYRAFGGQNTTGNPSATQNRHQYLKIELKNVIIASVSPAVDEEGIPKESFSLKYSAVKWTYDELNIDGTKSG
KVNIQGAWNLAKNTPNLT

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19595; Mature: 19595

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIYVEFKGSDIKGDSRDAKHKDTVEVYSWSHTMRQPKSATASAAGGHTAERVEHGEMI
CCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHCCCCEE
FTKDIDGSSPKLYQACSSGLVVSDVIIYFYRAFGGQNTTGNPSATQNRHQYLKIELKNVI
EEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
IASVSPAVDEEGIPKESFSLKYSAVKWTYDELNIDGTKSGKVNIQGAWNLAKNTPNLT
EEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKDIYVEFKGSDIKGDSRDAKHKDTVEVYSWSHTMRQPKSATASAAGGHTAERVEHGEMI
CCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHCCCCEE
FTKDIDGSSPKLYQACSSGLVVSDVIIYFYRAFGGQNTTGNPSATQNRHQYLKIELKNVI
EEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
IASVSPAVDEEGIPKESFSLKYSAVKWTYDELNIDGTKSGKVNIQGAWNLAKNTPNLT
EEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA