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The map label for this gene is 71907795

Identifier: 71907795

GI number: 71907795

Start: 2346957

End: 2348789

Strand: Reverse

Name: 71907795

Synonym: Daro_2173

Alternate gene names: NA

Gene position: 2348789-2346957 (Counterclockwise)

Preceding gene: 71907796

Following gene: 71907794

Centisome position: 52.18

GC content: 58.65

Gene sequence:

>1833_bases
GTGGAAGATCTGCTGCCTTATTACGAGCGAGAGCTGGCGTTTTTGCGCCAGCATTCCCGCGAGTTCGCCGAGCGCTACCC
GAAGCTTTCTGCACAGTTGTTGCTGTCGGGCGAGGGCTGCGACGACCCGCATGTCGAGCGGATGATCCAGTCCTTCGCGT
TGCTGACGGCGCGGGTTTCCAAAAAGCTGGAAGACAGCTACCCGCAATTCACTGAAGCACTGCTCAACGTCCTCTACCCG
CACTATCTGCGGCCGTTTCCGAGTTGCTCCATCGCTCATTTCGAACATGGCGGCGGTGAGCTGACCTCAGTTGCGACCAT
CTTGCGGGGAACAGAGTTGCAATCCCGACCGATCAAGGGTGCCGTCTGCAAGTTCCGGACGGCATGGGATGTTCAACTGG
CGCCGGTTTCCATTGGCGAGCTGGCATTCGATCCGGTGGCCAGTGCGCCCAGCGAAGTACGTCTGCCGGTCGGTTGTAAT
GCCATTCTTTCGTTTTCGCTTACCTTGCGTGGCAACAACCCCGAGGCCGGGCTGGGCAAGCTCGAGAAGTTGCGGGTCTA
TATCGATGCCGAGCCGTCGGTCGCTTCGGCGCTGCGCGACGCCATTTTCCTGCGCAAATTGAAAGTTTATGCCGTCGGTG
CAGACGAGCGCTGGCGTATCGCGCGGGAGAAGCTGATCAGCGAGGTCGGCTTTGCCGATCAGGAGGCGCTGATCGACATG
CCGGACACGTCACACGGCGCCTATCGCTACCTGACCGAGTATTTCTGTTTCCCGGAGAAATTCAATTTTTTTGATATCAA
CATCGGCGAGATTCCTTCCGGCTTGCACGCCGAAGGGAAGATATCCCTTCACATCGCGCTCGGTGATCTGCGGGCGGACA
GTGATGCCTCCCGTTTGCTGCAAACGCTAACCACGCAGAACCTGCGCTTGGGTTGTGTGCCGGTAGTCAATCTGTTTGCC
CAGCGGGGTGATCCGATCCGGATCAGCAATCGCCAGACGGCCTATCCGGTGGTTGCCGACGGGCGACGGGCTTACGCCTA
CGATGTTTATTCGATTGACTCGGTCCGACGAGTCCGCCAAAGCGCGCAGGGCGAAGCGATTACCGAGTTTCGCTCCTTCT
TTTCGCTGCGCCATGGCGAAACCCCGGAGCGCAACGGCTATTACTGGTATGCCCAGCGTGATCACCTGGTTGCAGAAAGC
AGCCCGGGTTACGAAACCTCGCTGTCCATCGTCGATGCCGATTTCGACCCGGTGCAGCCGAAGACCGACGTGCTCAGCCT
GCAGCTGACCTGCACCAATCGCGAATTGCCGACCTTAATGTCAGTCGGCATGCCGTCCGGCGACCTGTTTCTCGAAGGCG
GCTCGAGCGTTCGTTCGATCAAGCTGCTGCGTAAACCGACTCAGCCCTATCGTTTCGATCATCGACGGGATGGTCAGTGG
CGGATCATTTCGCATCTGTCGCTGAATCATCTGTCGCTGACCGGCAATGGTCTCAAGGCATTCCAGGAGATGCTGGCGCT
CTACGATCTGCCGAGAACGGCGGCCAGCCGCCGGCAGATCGAAGGCGTGCTCGATATCGAGCAGCGAGACAAAACGGTGT
GGATGGCCGGAAAACCGTTTGCCTGCTTTGTGCGAGGCCAGGAGGTTCGCATCACCATTGACGAATCCAGCTTCGTCGGC
AGCGGTCTTGATGTGTTCGTTCGCTGCATCGACCGCTTCCTCGGCCTGTACGTCAGTCTCAACAGCTTCATTCAACTGGT
TGTGGTTTCCAATCGAACCGGAGAGGAATTGATCCGATGCGCACCTCGCAACGGCGACTCGATCCTGGCCTAG

Upstream 100 bases:

>100_bases
CGTCAGGCCAGCCCAGGAACCGGTCAGTTTCGATGCACTGCTGCAGCCGACCAGCCTGCAGTATTCCGTGACCCGGCACC
GTCCGCGGCTGGGGGGCTAG

Downstream 100 bases:

>100_bases
TCGATAGCACCCTTGAGGCGCCGGAACGCTACGAGTTTTTCCAGCTCGTGCGTCTGTATGAAAGCGTCTTCCGGAAAACG
GCCCGGACAGCCGGTGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MEDLLPYYERELAFLRQHSREFAERYPKLSAQLLLSGEGCDDPHVERMIQSFALLTARVSKKLEDSYPQFTEALLNVLYP
HYLRPFPSCSIAHFEHGGGELTSVATILRGTELQSRPIKGAVCKFRTAWDVQLAPVSIGELAFDPVASAPSEVRLPVGCN
AILSFSLTLRGNNPEAGLGKLEKLRVYIDAEPSVASALRDAIFLRKLKVYAVGADERWRIAREKLISEVGFADQEALIDM
PDTSHGAYRYLTEYFCFPEKFNFFDINIGEIPSGLHAEGKISLHIALGDLRADSDASRLLQTLTTQNLRLGCVPVVNLFA
QRGDPIRISNRQTAYPVVADGRRAYAYDVYSIDSVRRVRQSAQGEAITEFRSFFSLRHGETPERNGYYWYAQRDHLVAES
SPGYETSLSIVDADFDPVQPKTDVLSLQLTCTNRELPTLMSVGMPSGDLFLEGGSSVRSIKLLRKPTQPYRFDHRRDGQW
RIISHLSLNHLSLTGNGLKAFQEMLALYDLPRTAASRRQIEGVLDIEQRDKTVWMAGKPFACFVRGQEVRITIDESSFVG
SGLDVFVRCIDRFLGLYVSLNSFIQLVVVSNRTGEELIRCAPRNGDSILA

Sequences:

>Translated_610_residues
MEDLLPYYERELAFLRQHSREFAERYPKLSAQLLLSGEGCDDPHVERMIQSFALLTARVSKKLEDSYPQFTEALLNVLYP
HYLRPFPSCSIAHFEHGGGELTSVATILRGTELQSRPIKGAVCKFRTAWDVQLAPVSIGELAFDPVASAPSEVRLPVGCN
AILSFSLTLRGNNPEAGLGKLEKLRVYIDAEPSVASALRDAIFLRKLKVYAVGADERWRIAREKLISEVGFADQEALIDM
PDTSHGAYRYLTEYFCFPEKFNFFDINIGEIPSGLHAEGKISLHIALGDLRADSDASRLLQTLTTQNLRLGCVPVVNLFA
QRGDPIRISNRQTAYPVVADGRRAYAYDVYSIDSVRRVRQSAQGEAITEFRSFFSLRHGETPERNGYYWYAQRDHLVAES
SPGYETSLSIVDADFDPVQPKTDVLSLQLTCTNRELPTLMSVGMPSGDLFLEGGSSVRSIKLLRKPTQPYRFDHRRDGQW
RIISHLSLNHLSLTGNGLKAFQEMLALYDLPRTAASRRQIEGVLDIEQRDKTVWMAGKPFACFVRGQEVRITIDESSFVG
SGLDVFVRCIDRFLGLYVSLNSFIQLVVVSNRTGEELIRCAPRNGDSILA
>Mature_610_residues
MEDLLPYYERELAFLRQHSREFAERYPKLSAQLLLSGEGCDDPHVERMIQSFALLTARVSKKLEDSYPQFTEALLNVLYP
HYLRPFPSCSIAHFEHGGGELTSVATILRGTELQSRPIKGAVCKFRTAWDVQLAPVSIGELAFDPVASAPSEVRLPVGCN
AILSFSLTLRGNNPEAGLGKLEKLRVYIDAEPSVASALRDAIFLRKLKVYAVGADERWRIAREKLISEVGFADQEALIDM
PDTSHGAYRYLTEYFCFPEKFNFFDINIGEIPSGLHAEGKISLHIALGDLRADSDASRLLQTLTTQNLRLGCVPVVNLFA
QRGDPIRISNRQTAYPVVADGRRAYAYDVYSIDSVRRVRQSAQGEAITEFRSFFSLRHGETPERNGYYWYAQRDHLVAES
SPGYETSLSIVDADFDPVQPKTDVLSLQLTCTNRELPTLMSVGMPSGDLFLEGGSSVRSIKLLRKPTQPYRFDHRRDGQW
RIISHLSLNHLSLTGNGLKAFQEMLALYDLPRTAASRRQIEGVLDIEQRDKTVWMAGKPFACFVRGQEVRITIDESSFVG
SGLDVFVRCIDRFLGLYVSLNSFIQLVVVSNRTGEELIRCAPRNGDSILA

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68447; Mature: 68447

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDLLPYYERELAFLRQHSREFAERYPKLSAQLLLSGEGCDDPHVERMIQSFALLTARVS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KKLEDSYPQFTEALLNVLYPHYLRPFPSCSIAHFEHGGGELTSVATILRGTELQSRPIKG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
AVCKFRTAWDVQLAPVSIGELAFDPVASAPSEVRLPVGCNAILSFSLTLRGNNPEAGLGK
CCEEEEEECEEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCCCCCCCC
LEKLRVYIDAEPSVASALRDAIFLRKLKVYAVGADERWRIAREKLISEVGFADQEALIDM
EEEEEEEEECCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHEEEC
PDTSHGAYRYLTEYFCFPEKFNFFDINIGEIPSGLHAEGKISLHIALGDLRADSDASRLL
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH
QTLTTQNLRLGCVPVVNLFAQRGDPIRISNRQTAYPVVADGRRAYAYDVYSIDSVRRVRQ
HHHHCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCEEECCCEEEEEEEECHHHHHHHHH
SAQGEAITEFRSFFSLRHGETPERNGYYWYAQRDHLVAESSPGYETSLSIVDADFDPVQP
HCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCC
KTDVLSLQLTCTNRELPTLMSVGMPSGDLFLEGGSSVRSIKLLRKPTQPYRFDHRRDGQW
CCCEEEEEEEECCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCE
RIISHLSLNHLSLTGNGLKAFQEMLALYDLPRTAASRRQIEGVLDIEQRDKTVWMAGKPF
EEEEEECEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCEEEECCCCE
ACFVRGQEVRITIDESSFVGSGLDVFVRCIDRFLGLYVSLNSFIQLVVVSNRTGEELIRC
EEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHEE
APRNGDSILA
CCCCCCCCCC
>Mature Secondary Structure
MEDLLPYYERELAFLRQHSREFAERYPKLSAQLLLSGEGCDDPHVERMIQSFALLTARVS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KKLEDSYPQFTEALLNVLYPHYLRPFPSCSIAHFEHGGGELTSVATILRGTELQSRPIKG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
AVCKFRTAWDVQLAPVSIGELAFDPVASAPSEVRLPVGCNAILSFSLTLRGNNPEAGLGK
CCEEEEEECEEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCCCCCCCC
LEKLRVYIDAEPSVASALRDAIFLRKLKVYAVGADERWRIAREKLISEVGFADQEALIDM
EEEEEEEEECCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHEEEC
PDTSHGAYRYLTEYFCFPEKFNFFDINIGEIPSGLHAEGKISLHIALGDLRADSDASRLL
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH
QTLTTQNLRLGCVPVVNLFAQRGDPIRISNRQTAYPVVADGRRAYAYDVYSIDSVRRVRQ
HHHHCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCEEECCCEEEEEEEECHHHHHHHHH
SAQGEAITEFRSFFSLRHGETPERNGYYWYAQRDHLVAESSPGYETSLSIVDADFDPVQP
HCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCC
KTDVLSLQLTCTNRELPTLMSVGMPSGDLFLEGGSSVRSIKLLRKPTQPYRFDHRRDGQW
CCCEEEEEEEECCCCCCHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCE
RIISHLSLNHLSLTGNGLKAFQEMLALYDLPRTAASRRQIEGVLDIEQRDKTVWMAGKPF
EEEEEECEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCEEEECCCCE
ACFVRGQEVRITIDESSFVGSGLDVFVRCIDRFLGLYVSLNSFIQLVVVSNRTGEELIRC
EEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHEE
APRNGDSILA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA