Click here to switch to the map view.

The map label for this gene is 71907796

Identifier: 71907796

GI number: 71907796

Start: 2348790

End: 2349269

Strand: Reverse

Name: 71907796

Synonym: Daro_2174

Alternate gene names: NA

Gene position: 2349269-2348790 (Counterclockwise)

Preceding gene: 71907797

Following gene: 71907795

Centisome position: 52.19

GC content: 58.75

Gene sequence:

>480_bases
ATGATCAAAGGTTTTGAGCCTTCCCTGTTCGATAAATTATTCGACGATCAGCCCGTTGGGGCTGCCCGGCGTCGTCTGTC
GCTTGAGCAGTTGAAGGACTCGGTCGCCCGTGATCTTGAAGCGCTGCTCAATACACGGGTGGTGCTCGATGATGGGTTCG
AGACAACCTACCCGCTGACGATGCGCTCGGTCGCCGGTTTTGGTTTGTCCGACTTCGCCGGGCTCAGCCTGGCTAATGTC
CATGACCGACGTCGAATCTGCGCTTCGATCGAATCGGCCATTGCGGCTCACGAGCCGCGCTTGCGTGAGGTTCGTGTCGA
TCTTGAATTGCATCGAAAGACGGTGAACGCCCTGTATTTCTCAATCAATGCCGTGCTGGTCGTCAGGCCAGCCCAGGAAC
CGGTCAGTTTCGATGCACTGCTGCAGCCGACCAGCCTGCAGTATTCCGTGACCCGGCACCGTCCGCGGCTGGGGGGCTAG

Upstream 100 bases:

>100_bases
CAATATCCAGGGCGCCTGGAACCTGGCCAAGAACACGCCGAATCTGACCTGATAATCATTTTTGTGGAATCCACGGCGGA
AACTCGTTTCCGCCTTTTTT

Downstream 100 bases:

>100_bases
GTGGAAGATCTGCTGCCTTATTACGAGCGAGAGCTGGCGTTTTTGCGCCAGCATTCCCGCGAGTTCGCCGAGCGCTACCC
GAAGCTTTCTGCACAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion System Protein; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIKGFEPSLFDKLFDDQPVGAARRRLSLEQLKDSVARDLEALLNTRVVLDDGFETTYPLTMRSVAGFGLSDFAGLSLANV
HDRRRICASIESAIAAHEPRLREVRVDLELHRKTVNALYFSINAVLVVRPAQEPVSFDALLQPTSLQYSVTRHRPRLGG

Sequences:

>Translated_159_residues
MIKGFEPSLFDKLFDDQPVGAARRRLSLEQLKDSVARDLEALLNTRVVLDDGFETTYPLTMRSVAGFGLSDFAGLSLANV
HDRRRICASIESAIAAHEPRLREVRVDLELHRKTVNALYFSINAVLVVRPAQEPVSFDALLQPTSLQYSVTRHRPRLGG
>Mature_159_residues
MIKGFEPSLFDKLFDDQPVGAARRRLSLEQLKDSVARDLEALLNTRVVLDDGFETTYPLTMRSVAGFGLSDFAGLSLANV
HDRRRICASIESAIAAHEPRLREVRVDLELHRKTVNALYFSINAVLVVRPAQEPVSFDALLQPTSLQYSVTRHRPRLGG

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17788; Mature: 17788

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGFEPSLFDKLFDDQPVGAARRRLSLEQLKDSVARDLEALLNTRVVLDDGFETTYPLT
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH
MRSVAGFGLSDFAGLSLANVHDRRRICASIESAIAAHEPRLREVRVDLELHRKTVNALYF
HHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHE
SINAVLVVRPAQEPVSFDALLQPTSLQYSVTRHRPRLGG
EEEEEEEEECCCCCCCHHHHCCCCCCEEEHHHCCCCCCC
>Mature Secondary Structure
MIKGFEPSLFDKLFDDQPVGAARRRLSLEQLKDSVARDLEALLNTRVVLDDGFETTYPLT
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHH
MRSVAGFGLSDFAGLSLANVHDRRRICASIESAIAAHEPRLREVRVDLELHRKTVNALYF
HHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHE
SINAVLVVRPAQEPVSFDALLQPTSLQYSVTRHRPRLGG
EEEEEEEEECCCCCCCHHHHCCCCCCEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA