Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907791

Identifier: 71907791

GI number: 71907791

Start: 2339770

End: 2342571

Strand: Reverse

Name: 71907791

Synonym: Daro_2169

Alternate gene names: NA

Gene position: 2342571-2339770 (Counterclockwise)

Preceding gene: 71907792

Following gene: 71907790

Centisome position: 52.04

GC content: 63.35

Gene sequence:

>2802_bases
ATGACCATGAACAGCTTCCTAGATCTGATTTCCGGCGGCGCCGCCTGGCGCCAGACCGACCGGCTACTGACGCTGACCAC
GCCGGCCGGGCCGGATGCCTTGCTGGCCGAAACGGCCAGCATTGACGAAGCCCTCGGCCCGGTTGCAGAGCACGCCGGTT
ATCGCATCCAATTAACGGTTCTGACGGCCAACGCCGAGCAATCCCTGACCGCCTTGCTCGGCCAGCCAGCCCGTCTGGAC
CTGCAAACCAGTGCCTTGCGCACAGTGCGGCGGCCTTTCCACGGTCACATTACGCAAGTCACCCGTCTTGGTGCCAACGG
CGGTTTCGCCCGTTACAAACTGATCATCGAACCCTGGCTCGCCTTCCTTGGCCACAATCAGGACAACTACCTGTTTCAGG
ACAAGAGCGTCATCGAGATCATTGACGAACTGCTCGGCGACTGGAAGTCCCAAGGCAAGCTCGTTCCCGACTGGCGCTGG
GTCCTGGCTGACACCGCCGCTTACCCCAAGCGCGGCATGACCGTGCAATACCGCGAAAGCGATCTCGCTTTCCTCAAGCG
TCTGCTGGCCGAAGAGGGGTTGTTCTGCTGGTTCGAACACCAGGCTGAAGAAGGCGACACCCTGGGTAAGCACACCCTGA
TCATCGCTGACCATAACGGTGCCTTCACCGATAACACGCAACCCCGCATCCGCTTCACCCAGGCCGGCGCAACGCTCTCC
GAAGACAGTCTCGACCGCTGGCACGGCCTGCGCCAGCTCGACACCGTCGAAACCAACGCCAGCAGTTGGGATTACCGCAG
CCTCTCGACCCGGCCGCAAGGCGCCCGCAGCAGTATCGACAGCGGCAGCCTACCCAAGACCGCTGCCTGGCACGACCCCG
GCCAATACGCCTGGCAGAACAGCGCCCACGGCGAACGTATGCTCGGCAACCAACGCCAAGCTATCGATGCGCGAATGAAA
CAATTCGACGGCCAAGGCACCGTCCGTAGCGCCGCCCCCGGCACCACCTTCAGGCTGGCCGACCACCCCGAACACGACCT
CGACGCCCCGGAACAACGCAAGTTCCTGATCACCGCCGTCAGCCACCAAGCTCGTAATAATCTGGACGAAACCGTCAATG
GCGAACAAGGCCGGGAGCAGGGCAGCGAACAAAGCGTCGACCTCTACCGCAACCAGATCACCGCCATCCGTGCCAGCATC
CCCTGGCGCCCCTTGAGCTCGGACAGCCACGGCCGGAACATCCACCCGCGCCCGACCATCAACGGCACGCTGACCGCTGT
CGTCGTCGGCAACGGCCAACCCACCCACACCGACCGTGACAGGCGCGTCCGCGTCCAGTTCCCCTGGCAACGTGGTGCCC
AATCCGCCGGGCGCAGCGAACACCCCACCGGCGCGGACAACGGTCCGGCCAGCGACGCCCTTGGCGTCTGGCTCCGCGTC
ATGACCCCCGTCGCCGGTGCCAACTGGGGCGGCCACATGACCCCGCGCCCCGGCCAGGAAGTCCTCGTCGCCTTCCAGAA
CGGCAACATCGACCGCCCGATCATCATCGGCACCGTCTACAACGGCAGCGGCAACACCGACGCCCAAGGCAACCAGCAAG
CCGGCAGCACCCTGCAAGCCAGTGCCAATGCCCCCGCCTTCTTCGCGGGCAAGGAAGCCGAAGCCCACACCCACAACGCC
AGCCTCTCCGGCCTCAAAAGCCAGCAACTCAATGCCAGCAAAACCGGGCAGGGCGGCTACAACCAACTCGTCTTCGACGA
CACCCCCGGCGAATCCCGCATCGAAGTCTCTACCACCGAATACCAGAGCATTCTCCAACTCGGCCACCTCAAACAACAAA
GTGACAACGCCCGCCAAGCCGACCGTGGCCACGGCGCCGAACTGGCGACCCAGTCTGCCAGCGCCATACGCGCCGGCAAC
GGCCTCCTGATCAGTGCCGATGCCCGCCCCAATGCCAGCAGCAGCCACCTCGACAGCCGCGAACCCATCGCCCAGACCCA
GGACGCCCAAAGCCTGACGCAAAGCTTGGCGGAGGTCGCCGCCAAACAAAACGCCGCCCTCAAAGGCGACCCCCAAGCCG
ACAAACTCCCGGCCAGCGAAGCCCTCAAACACGCCATCGACGTCATGAGCGCCACCGCGACTCAAGGCCAAACTCAAGCC
GGCAGCGACACCATCAAAGCCACCCTCGGCGGCACCGGTACCGTCCCCGCCTGGTCAGAACCGCGCATTCAATACAGCGC
CCCGGCCGGCATCGCCCAACTCACCCCGCAAAACCACATCCTCGCCGCCGGCAAACACCTCAGCATTGCCACCGGACAGG
ACACCAACCTCATCGCCCAAGGCCACCACAGCCTCTCCGTCAAGGATGGCATTGCCCTCTTCACCGTCGGCAAAGCCAAG
GGCAAAAACAAACCCAACACTGAAACTGGCATCCACCTCCACGCCGCCAGCGGAAGCGTCAGCCTGCAAAGCCAAAGCGG
CAAAACCACCGGTGCTGCCGACAAGAAAGTGACGATCGCCAGCACCACCGGTAACCTCAACGCCAGTGCCAAACAACACA
TCCTCGCTATGGCCCAAGGGGCTTACCTGAAGATCGAGGGCGGGAATATTAGCCTGCATGCACCGGGCAAGGTGGAACTG
AAGGCGAGTCAAAAGAATTTGACGGGGCCCAAGAGTGCTTCAACAAACTTGCCGGCCTGGAACGTTGGCGAACTGAACTT
GGCCAATTCTCCTGAGCGAAAAGCAACCTGCCTCCAGGCGGCAAGCCGTAGCGGCGCTGCATTCGTTCAACTGGATAAGT
AA

Upstream 100 bases:

>100_bases
AAATTCGTTTAACATATCGCGTTGGGCTCGATCCGGTTTTCGATGAGCTGCTCAAAAGTTCATCCTGCCGTTTATTTACA
CCACACCAACCGTTGATTGC

Downstream 100 bases:

>100_bases
CTATGGCGTGGCACTACGAATGCATCCCGGCCCAAACGCCGGATACGTTGGCGGCCTGGCTTTCAGAACCGGACCAAACT
GACCGCTATGCGCTCATTGA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs-Family Protein; Rhs Element Vgr Family; VgrG Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element VGR-Related Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Vgr Protein; VgrG Family T6SS G

Number of amino acids: Translated: 933; Mature: 932

Protein sequence:

>933_residues
MTMNSFLDLISGGAAWRQTDRLLTLTTPAGPDALLAETASIDEALGPVAEHAGYRIQLTVLTANAEQSLTALLGQPARLD
LQTSALRTVRRPFHGHITQVTRLGANGGFARYKLIIEPWLAFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRW
VLADTAAYPKRGMTVQYRESDLAFLKRLLAEEGLFCWFEHQAEEGDTLGKHTLIIADHNGAFTDNTQPRIRFTQAGATLS
EDSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHDPGQYAWQNSAHGERMLGNQRQAIDARMK
QFDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRKFLITAVSHQARNNLDETVNGEQGREQGSEQSVDLYRNQITAIRASI
PWRPLSSDSHGRNIHPRPTINGTLTAVVVGNGQPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLRV
MTPVAGANWGGHMTPRPGQEVLVAFQNGNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQASANAPAFFAGKEAEAHTHNA
SLSGLKSQQLNASKTGQGGYNQLVFDDTPGESRIEVSTTEYQSILQLGHLKQQSDNARQADRGHGAELATQSASAIRAGN
GLLISADARPNASSSHLDSREPIAQTQDAQSLTQSLAEVAAKQNAALKGDPQADKLPASEALKHAIDVMSATATQGQTQA
GSDTIKATLGGTGTVPAWSEPRIQYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQGHHSLSVKDGIALFTVGKAK
GKNKPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIASTTGNLNASAKQHILAMAQGAYLKIEGGNISLHAPGKVEL
KASQKNLTGPKSASTNLPAWNVGELNLANSPERKATCLQAASRSGAAFVQLDK

Sequences:

>Translated_933_residues
MTMNSFLDLISGGAAWRQTDRLLTLTTPAGPDALLAETASIDEALGPVAEHAGYRIQLTVLTANAEQSLTALLGQPARLD
LQTSALRTVRRPFHGHITQVTRLGANGGFARYKLIIEPWLAFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRW
VLADTAAYPKRGMTVQYRESDLAFLKRLLAEEGLFCWFEHQAEEGDTLGKHTLIIADHNGAFTDNTQPRIRFTQAGATLS
EDSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHDPGQYAWQNSAHGERMLGNQRQAIDARMK
QFDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRKFLITAVSHQARNNLDETVNGEQGREQGSEQSVDLYRNQITAIRASI
PWRPLSSDSHGRNIHPRPTINGTLTAVVVGNGQPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLRV
MTPVAGANWGGHMTPRPGQEVLVAFQNGNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQASANAPAFFAGKEAEAHTHNA
SLSGLKSQQLNASKTGQGGYNQLVFDDTPGESRIEVSTTEYQSILQLGHLKQQSDNARQADRGHGAELATQSASAIRAGN
GLLISADARPNASSSHLDSREPIAQTQDAQSLTQSLAEVAAKQNAALKGDPQADKLPASEALKHAIDVMSATATQGQTQA
GSDTIKATLGGTGTVPAWSEPRIQYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQGHHSLSVKDGIALFTVGKAK
GKNKPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIASTTGNLNASAKQHILAMAQGAYLKIEGGNISLHAPGKVEL
KASQKNLTGPKSASTNLPAWNVGELNLANSPERKATCLQAASRSGAAFVQLDK
>Mature_932_residues
TMNSFLDLISGGAAWRQTDRLLTLTTPAGPDALLAETASIDEALGPVAEHAGYRIQLTVLTANAEQSLTALLGQPARLDL
QTSALRTVRRPFHGHITQVTRLGANGGFARYKLIIEPWLAFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRWV
LADTAAYPKRGMTVQYRESDLAFLKRLLAEEGLFCWFEHQAEEGDTLGKHTLIIADHNGAFTDNTQPRIRFTQAGATLSE
DSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHDPGQYAWQNSAHGERMLGNQRQAIDARMKQ
FDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRKFLITAVSHQARNNLDETVNGEQGREQGSEQSVDLYRNQITAIRASIP
WRPLSSDSHGRNIHPRPTINGTLTAVVVGNGQPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLRVM
TPVAGANWGGHMTPRPGQEVLVAFQNGNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQASANAPAFFAGKEAEAHTHNAS
LSGLKSQQLNASKTGQGGYNQLVFDDTPGESRIEVSTTEYQSILQLGHLKQQSDNARQADRGHGAELATQSASAIRAGNG
LLISADARPNASSSHLDSREPIAQTQDAQSLTQSLAEVAAKQNAALKGDPQADKLPASEALKHAIDVMSATATQGQTQAG
SDTIKATLGGTGTVPAWSEPRIQYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQGHHSLSVKDGIALFTVGKAKG
KNKPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIASTTGNLNASAKQHILAMAQGAYLKIEGGNISLHAPGKVELK
ASQKNLTGPKSASTNLPAWNVGELNLANSPERKATCLQAASRSGAAFVQLDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99816; Mature: 99685

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMNSFLDLISGGAAWRQTDRLLTLTTPAGPDALLAETASIDEALGPVAEHAGYRIQLTV
CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE
LTANAEQSLTALLGQPARLDLQTSALRTVRRPFHGHITQVTRLGANGGFARYKLIIEPWL
EECCCHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHEECCCCCCEEEEEHHHHHH
AFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRWVLADTAAYPKRGMTVQYRES
HHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCH
DLAFLKRLLAEEGLFCWFEHQAEEGDTLGKHTLIIADHNGAFTDNTQPRIRFTQAGATLS
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC
EDSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHDPGQYAWQN
CCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
SAHGERMLGNQRQAIDARMKQFDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRKFLITAV
CCCCHHHHCCHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCEEEEEEH
SHQARNNLDETVNGEQGREQGSEQSVDLYRNQITAIRASIPWRPLSSDSHGRNIHPRPTI
HHHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCC
NGTLTAVVVGNGQPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLRV
CCEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
MTPVAGANWGGHMTPRPGQEVLVAFQNGNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQA
HHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
SANAPAFFAGKEAEAHTHNASLSGLKSQQLNASKTGQGGYNQLVFDDTPGESRIEVSTTE
CCCCCEEEECCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
YQSILQLGHLKQQSDNARQADRGHGAELATQSASAIRAGNGLLISADARPNASSSHLDSR
HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCHHHEECCCCEEEECCCCCCCCCCCCCCC
EPIAQTQDAQSLTQSLAEVAAKQNAALKGDPQADKLPASEALKHAIDVMSATATQGQTQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GSDTIKATLGGTGTVPAWSEPRIQYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQ
CCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEC
GHHSLSVKDGIALFTVGKAKGKNKPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIA
CCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEE
STTGNLNASAKQHILAMAQGAYLKIEGGNISLHAPGKVELKASQKNLTGPKSASTNLPAW
ECCCCCCCHHHHHHHHEECCCEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
NVGELNLANSPERKATCLQAASRSGAAFVQLDK
CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure 
TMNSFLDLISGGAAWRQTDRLLTLTTPAGPDALLAETASIDEALGPVAEHAGYRIQLTV
CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE
LTANAEQSLTALLGQPARLDLQTSALRTVRRPFHGHITQVTRLGANGGFARYKLIIEPWL
EECCCHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHEECCCCCCEEEEEHHHHHH
AFLGHNQDNYLFQDKSVIEIIDELLGDWKSQGKLVPDWRWVLADTAAYPKRGMTVQYRES
HHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCH
DLAFLKRLLAEEGLFCWFEHQAEEGDTLGKHTLIIADHNGAFTDNTQPRIRFTQAGATLS
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC
EDSLDRWHGLRQLDTVETNASSWDYRSLSTRPQGARSSIDSGSLPKTAAWHDPGQYAWQN
CCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
SAHGERMLGNQRQAIDARMKQFDGQGTVRSAAPGTTFRLADHPEHDLDAPEQRKFLITAV
CCCCHHHHCCHHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCEEEEEEH
SHQARNNLDETVNGEQGREQGSEQSVDLYRNQITAIRASIPWRPLSSDSHGRNIHPRPTI
HHHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCC
NGTLTAVVVGNGQPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLRV
CCEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
MTPVAGANWGGHMTPRPGQEVLVAFQNGNIDRPIIIGTVYNGSGNTDAQGNQQAGSTLQA
HHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
SANAPAFFAGKEAEAHTHNASLSGLKSQQLNASKTGQGGYNQLVFDDTPGESRIEVSTTE
CCCCCEEEECCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
YQSILQLGHLKQQSDNARQADRGHGAELATQSASAIRAGNGLLISADARPNASSSHLDSR
HHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHCHHHEECCCCEEEECCCCCCCCCCCCCCC
EPIAQTQDAQSLTQSLAEVAAKQNAALKGDPQADKLPASEALKHAIDVMSATATQGQTQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GSDTIKATLGGTGTVPAWSEPRIQYSAPAGIAQLTPQNHILAAGKHLSIATGQDTNLIAQ
CCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEC
GHHSLSVKDGIALFTVGKAKGKNKPNTETGIHLHAASGSVSLQSQSGKTTGAADKKVTIA
CCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEE
STTGNLNASAKQHILAMAQGAYLKIEGGNISLHAPGKVELKASQKNLTGPKSASTNLPAW
ECCCCCCCHHHHHHHHEECCCEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
NVGELNLANSPERKATCLQAASRSGAAFVQLDK
CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA