| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907790
Identifier: 71907790
GI number: 71907790
Start: 2338874
End: 2339767
Strand: Reverse
Name: 71907790
Synonym: Daro_2168
Alternate gene names: NA
Gene position: 2339767-2338874 (Counterclockwise)
Preceding gene: 71907791
Following gene: 71907789
Centisome position: 51.98
GC content: 54.14
Gene sequence:
>894_bases ATGGCGTGGCACTACGAATGCATCCCGGCCCAAACGCCGGATACGTTGGCGGCCTGGCTTTCAGAACCGGACCAAACTGA CCGCTATGCGCTCATTGACGCCCAGCGTTTGAGTGCTGCACAGATTCAAGCAGTCGATAGACATCAATGGGGTATTGCCG TCAATTTGTACGGTGATCTCGAAGGCACGGCGATCGCCGCTATGGGGCCGAGGCTGGTTAAGCTTCCCCGCGAAGAGATA CCCAATATTGTTCAGCTGGCGCTGGCGAGCCGATCCGTCAGTTTCTTGATTGGAAAATGTGATTTCTCGACGCTGTCAGC GCATCTGCAAGCAATACGCGAGGTAGAGATTCCCAACCGGACGGCGGTGCTGTTTCGCTATCAGGATATTCACGTCACTG CCGTGCTCTTTCCAATTCTTCCATCGGGGGAAATGGCACGTTGCCTTGGTCCGCTCTCCGCATGGGCTGTGCCGGATGCC TGCAACAAACTTCATATCATTTCGGCAAGCGGCCAACAACGAAGCAGCGGTTCGTTGCGCTTCGATCAGAAGACGGTTGA AATTCTTGAGGACCGCCTGTTCGTGCATGCTGCCATAGCTCAGGTCAATGATGCGGATAGCCTCCTGCTGGCCTCCTACA GTGAATGCGAAGCAGAAACCTTGGTCCGGGAACGTATCGAAACGGCCAGATCATTCGGCCTTGAGCAACGAGAAGACTTG GCGCTGTATTGCGTACTAAGCCTGCAATTTCCGCCCGGTTTCGAGAAAGAGTCACCGTTTGCCGAGGCAATCCACTATCG GGATAAAAGCAAGCCGTCCTTTGGTGCAGCCTTGGATGATGCATCCTCCGAAGTTTGGATCCGATGGGATGATCGTTTGA AAGACAAGGAGTAA
Upstream 100 bases:
>100_bases TTGGCGAACTGAACTTGGCCAATTCTCCTGAGCGAAAAGCAACCTGCCTCCAGGCGGCAAGCCGTAGCGGCGCTGCATTC GTTCAACTGGATAAGTAACT
Downstream 100 bases:
>100_bases TGATGGGATTCTCTCGAATACTTCAATCCATTTTTATGTTCATGGTTATTCTTTTGTTGTCAGCCAGTTTTTCTGCGCTG TTGGGCTATGGGGTGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAWHYECIPAQTPDTLAAWLSEPDQTDRYALIDAQRLSAAQIQAVDRHQWGIAVNLYGDLEGTAIAAMGPRLVKLPREEI PNIVQLALASRSVSFLIGKCDFSTLSAHLQAIREVEIPNRTAVLFRYQDIHVTAVLFPILPSGEMARCLGPLSAWAVPDA CNKLHIISASGQQRSSGSLRFDQKTVEILEDRLFVHAAIAQVNDADSLLLASYSECEAETLVRERIETARSFGLEQREDL ALYCVLSLQFPPGFEKESPFAEAIHYRDKSKPSFGAALDDASSEVWIRWDDRLKDKE
Sequences:
>Translated_297_residues MAWHYECIPAQTPDTLAAWLSEPDQTDRYALIDAQRLSAAQIQAVDRHQWGIAVNLYGDLEGTAIAAMGPRLVKLPREEI PNIVQLALASRSVSFLIGKCDFSTLSAHLQAIREVEIPNRTAVLFRYQDIHVTAVLFPILPSGEMARCLGPLSAWAVPDA CNKLHIISASGQQRSSGSLRFDQKTVEILEDRLFVHAAIAQVNDADSLLLASYSECEAETLVRERIETARSFGLEQREDL ALYCVLSLQFPPGFEKESPFAEAIHYRDKSKPSFGAALDDASSEVWIRWDDRLKDKE >Mature_296_residues AWHYECIPAQTPDTLAAWLSEPDQTDRYALIDAQRLSAAQIQAVDRHQWGIAVNLYGDLEGTAIAAMGPRLVKLPREEIP NIVQLALASRSVSFLIGKCDFSTLSAHLQAIREVEIPNRTAVLFRYQDIHVTAVLFPILPSGEMARCLGPLSAWAVPDAC NKLHIISASGQQRSSGSLRFDQKTVEILEDRLFVHAAIAQVNDADSLLLASYSECEAETLVRERIETARSFGLEQREDLA LYCVLSLQFPPGFEKESPFAEAIHYRDKSKPSFGAALDDASSEVWIRWDDRLKDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33124; Mature: 32993
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWHYECIPAQTPDTLAAWLSEPDQTDRYALIDAQRLSAAQIQAVDRHQWGIAVNLYGDL CCEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECC EGTAIAAMGPRLVKLPREEIPNIVQLALASRSVSFLIGKCDFSTLSAHLQAIREVEIPNR CCCEEEECCCHHEECCHHHCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC TAVLFRYQDIHVTAVLFPILPSGEMARCLGPLSAWAVPDACNKLHIISASGQQRSSGSLR EEEEEEEECEEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCCEE FDQKTVEILEDRLFVHAAIAQVNDADSLLLASYSECEAETLVRERIETARSFGLEQREDL ECHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCE ALYCVLSLQFPPGFEKESPFAEAIHYRDKSKPSFGAALDDASSEVWIRWDDRLKDKE EEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure AWHYECIPAQTPDTLAAWLSEPDQTDRYALIDAQRLSAAQIQAVDRHQWGIAVNLYGDL CEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECC EGTAIAAMGPRLVKLPREEIPNIVQLALASRSVSFLIGKCDFSTLSAHLQAIREVEIPNR CCCEEEECCCHHEECCHHHCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC TAVLFRYQDIHVTAVLFPILPSGEMARCLGPLSAWAVPDACNKLHIISASGQQRSSGSLR EEEEEEEECEEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCCEEEEEECCCCCCCCCCEE FDQKTVEILEDRLFVHAAIAQVNDADSLLLASYSECEAETLVRERIETARSFGLEQREDL ECHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCE ALYCVLSLQFPPGFEKESPFAEAIHYRDKSKPSFGAALDDASSEVWIRWDDRLKDKE EEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA