Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907763

Identifier: 71907763

GI number: 71907763

Start: 2306887

End: 2307417

Strand: Reverse

Name: 71907763

Synonym: Daro_2139

Alternate gene names: NA

Gene position: 2307417-2306887 (Counterclockwise)

Preceding gene: 71907766

Following gene: 71907762

Centisome position: 51.26

GC content: 63.28

Gene sequence:

>531_bases
ATGACCGATGCAGTAATCGACGCAGTAAACGACATTCAATCGTCTGCCCAAGTGTCCCCTTCGTTTGCCGAAGGCAGCAA
TGCCGGCGGCGCCTCACCGATTCTTGAGCAGGCGCGCCAGCAGGCTGCCGCCGACAACCTGCCGTACGCCGGCAGCGTCA
GGCCGCAGGATGCCTGGGCGCTGTTCCAGTCCGGCGAAGCCGTGCTGATCGACGTTCGGACAGCCGAAGAGCGCAAGTTC
GTCGGGCATGTGCCGGAGACCAAGCACGTCGCCTGGATGACCGGCCTGTCGTTGTCGCGCAACCCGCGTTTCGTCAAGGA
ACTGGAAGCCAAGGCCGGCAAGGAGACCGTTGTGCTGTTGCTCTGTCGCAGCGGCAAGCGTTCGGCTGCCGCAGCCGAAG
CGGCGGCCAAGGGCGGTTTCAAGAACGTTTTCAACATCCTCGAAGGCTTCGAGGGCGATCTCGACGAACAGCAGCGGCGT
GGTTCCTTCAATGGCTGGCGTAGCGCCGGCCTGCCGTGGATTCAGGACTGA

Upstream 100 bases:

>100_bases
GAATAAATTGGTGGCTACAGGCATCAGTGAGCTTGTTCAGTGATCCCCGCCCCCGAACAAAGCCGGTTAATCCGGCTGGC
CGAAAGCGAAAGGAATCGCC

Downstream 100 bases:

>100_bases
TTCAAACATTTTCAGGGAGAAAACAGCATGTCCAAATGGTTTGCAGATAATTCACAGTCGATCGGCCGCACGCCGCTGAT
CAAGCTCAACCGTGTCATCG

Product: rhodanese-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTDAVIDAVNDIQSSAQVSPSFAEGSNAGGASPILEQARQQAAADNLPYAGSVRPQDAWALFQSGEAVLIDVRTAEERKF
VGHVPETKHVAWMTGLSLSRNPRFVKELEAKAGKETVVLLLCRSGKRSAAAAEAAAKGGFKNVFNILEGFEGDLDEQQRR
GSFNGWRSAGLPWIQD

Sequences:

>Translated_176_residues
MTDAVIDAVNDIQSSAQVSPSFAEGSNAGGASPILEQARQQAAADNLPYAGSVRPQDAWALFQSGEAVLIDVRTAEERKF
VGHVPETKHVAWMTGLSLSRNPRFVKELEAKAGKETVVLLLCRSGKRSAAAAEAAAKGGFKNVFNILEGFEGDLDEQQRR
GSFNGWRSAGLPWIQD
>Mature_175_residues
TDAVIDAVNDIQSSAQVSPSFAEGSNAGGASPILEQARQQAAADNLPYAGSVRPQDAWALFQSGEAVLIDVRTAEERKFV
GHVPETKHVAWMTGLSLSRNPRFVKELEAKAGKETVVLLLCRSGKRSAAAAEAAAKGGFKNVFNILEGFEGDLDEQQRRG
SFNGWRSAGLPWIQD

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 18885; Mature: 18754

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAVIDAVNDIQSSAQVSPSFAEGSNAGGASPILEQARQQAAADNLPYAGSVRPQDAWA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
LFQSGEAVLIDVRTAEERKFVGHVPETKHVAWMTGLSLSRNPRFVKELEAKAGKETVVLL
HHHCCCEEEEEECCCCCHHHHCCCCCCCCEEHEECCCCCCCCHHHHHHHHHCCCCEEEEE
LCRSGKRSAAAAEAAAKGGFKNVFNILEGFEGDLDEQQRRGSFNGWRSAGLPWIQD
EECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
TDAVIDAVNDIQSSAQVSPSFAEGSNAGGASPILEQARQQAAADNLPYAGSVRPQDAWA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
LFQSGEAVLIDVRTAEERKFVGHVPETKHVAWMTGLSLSRNPRFVKELEAKAGKETVVLL
HHHCCCEEEEEECCCCCHHHHCCCCCCCCEEHEECCCCCCCCHHHHHHHHHCCCCEEEEE
LCRSGKRSAAAAEAAAKGGFKNVFNILEGFEGDLDEQQRRGSFNGWRSAGLPWIQD
EECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]