| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is pyk [H]
Identifier: 71907743
GI number: 71907743
Start: 2287039
End: 2288457
Strand: Reverse
Name: pyk [H]
Synonym: Daro_2117
Alternate gene names: 71907743
Gene position: 2288457-2287039 (Counterclockwise)
Preceding gene: 71907744
Following gene: 71907742
Centisome position: 50.84
GC content: 57.43
Gene sequence:
>1419_bases ATGCACCGTAACCGTAATGCCAAAATTGTCGCCACCCTCGGCCCAGCCAGTTCTGATCGCGACACGATCCAGAAGCTTTA CTTGAATGGGGCCGATATCTTTCGTCTTAACTTCAGCCACGGTACCCATGAGGATCACAAAAGAAGCCTGGAAACCATCC GTGATGTCGAGCGAGAAGCCGGTCGTCCAATTGGCGTGCTCCTTGATCTTCAGGGCCCAAAGCTGCGCCTCGGCAAATTT GCCAATGGCCCCATCACTTTGGCCGAAGGCGACAAGTTCCGCCTCGACCTGGACTGTGACAGGCCGGGCGATCAAACCCG GGCCCCCATGCCGCACCCGGAGATTTTCAAGGCGCTGAGCGTACAGTCCAGCCTCCTGATTGACGATGGCCGCATTCGCC TGTTCGTCGAAAAATGCGGGCCCGACTTCGCCGAAACCAGAGTTGTTGCCGGGGGAACACTATCTGACCGCAAGGGCGTC AATGTCCCCGGATCACTTATTCCGATGTCGGCAATGACCGACAAGGATCGCGCGGACCTCGATTTTGGTTTAACCCTGGG AGTAGATTGGGTTGCGCTCTCCTTTGTGCAACGAGCCGAGGACATACTGGAAATCAAGAAAATCATCGATGGCCGTGCCG GTGTTATCGCCAAACTGGAGAAGCCAGCGGCAATCGAGCGTCTCGAGGCCATCGTCAATGTCAGCGACGCCATCATGGTT GCTCGTGGCGACCTGGGCGTCGAAATGCCACCGGAACAAGTGCCAGCGATTCAAAAGCGGATCATTCGTGCCTGCAGAAG CGCCGGCAAGCCGGTTATTGTGGCAACGCAGATGCTTGATTCCATGGTCGCTGCACCGGTGCCGACCCGCGCCGAAGCAT CCGATGTAGCAACAGCGATCTACGATGGTGCCGATGCCGTCATGCTTTCCGCTGAATCGGCCTCTGGAAAATATCCAGTT GCAGCAGTAAAGATGATGGACAGCATCATCAGCAGAACCGAGTCCGATCCCTACTATCGGGTAGCCATCGACGCGTCACA ACCACCGGCACGGGCCAACAAGGCGGATGCCATCGGTTCTGCTGTACGCCATGTCGCCGATCTGCTGCATATTGCCGTGA CCGTTGCCTATACCAGTTCGGGCACGTCTGCATTGAGCATGGCGCGAGAACGACCCAAGGCCCCGATCATCGCCCTGACG CCACGACTGGCCACGGCCCGTCGACTGTCTCTGGCCTGGGGTTTGCATGCCGTCATGTGCCATGACGTTGTCGATGTGAC TGAAATGACTGACCTGGCCTGCGAAACGGCCAGAAGGCAGCATTTTGCTTCACGAGGGCAAAGCGTTGTGATCTCGGCTG GCATGCCTTTCGGTAGGTCTGGCACGACCAATTTGCTGCGCATCGCCGAACTTAGCTGA
Upstream 100 bases:
>100_bases CGATCATTACTGGCCCGACGCTGACCAACCTCAATGACTTTCGCGCCATTTTCATTACCGGCGAGACGGCTTGAGTCGCT CGCTTGAAAGGACACTGAAC
Downstream 100 bases:
>100_bases TCAGCTGATTAACCATGGCAAGGACTAAGCGGCAGTCGCAGCGCGTACGGGAAAATCACACTATCGCACGGGCGGCAAAT TGGACAGAATCACCAATAAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MHRNRNAKIVATLGPASSDRDTIQKLYLNGADIFRLNFSHGTHEDHKRSLETIRDVEREAGRPIGVLLDLQGPKLRLGKF ANGPITLAEGDKFRLDLDCDRPGDQTRAPMPHPEIFKALSVQSSLLIDDGRIRLFVEKCGPDFAETRVVAGGTLSDRKGV NVPGSLIPMSAMTDKDRADLDFGLTLGVDWVALSFVQRAEDILEIKKIIDGRAGVIAKLEKPAAIERLEAIVNVSDAIMV ARGDLGVEMPPEQVPAIQKRIIRACRSAGKPVIVATQMLDSMVAAPVPTRAEASDVATAIYDGADAVMLSAESASGKYPV AAVKMMDSIISRTESDPYYRVAIDASQPPARANKADAIGSAVRHVADLLHIAVTVAYTSSGTSALSMARERPKAPIIALT PRLATARRLSLAWGLHAVMCHDVVDVTEMTDLACETARRQHFASRGQSVVISAGMPFGRSGTTNLLRIAELS
Sequences:
>Translated_472_residues MHRNRNAKIVATLGPASSDRDTIQKLYLNGADIFRLNFSHGTHEDHKRSLETIRDVEREAGRPIGVLLDLQGPKLRLGKF ANGPITLAEGDKFRLDLDCDRPGDQTRAPMPHPEIFKALSVQSSLLIDDGRIRLFVEKCGPDFAETRVVAGGTLSDRKGV NVPGSLIPMSAMTDKDRADLDFGLTLGVDWVALSFVQRAEDILEIKKIIDGRAGVIAKLEKPAAIERLEAIVNVSDAIMV ARGDLGVEMPPEQVPAIQKRIIRACRSAGKPVIVATQMLDSMVAAPVPTRAEASDVATAIYDGADAVMLSAESASGKYPV AAVKMMDSIISRTESDPYYRVAIDASQPPARANKADAIGSAVRHVADLLHIAVTVAYTSSGTSALSMARERPKAPIIALT PRLATARRLSLAWGLHAVMCHDVVDVTEMTDLACETARRQHFASRGQSVVISAGMPFGRSGTTNLLRIAELS >Mature_472_residues MHRNRNAKIVATLGPASSDRDTIQKLYLNGADIFRLNFSHGTHEDHKRSLETIRDVEREAGRPIGVLLDLQGPKLRLGKF ANGPITLAEGDKFRLDLDCDRPGDQTRAPMPHPEIFKALSVQSSLLIDDGRIRLFVEKCGPDFAETRVVAGGTLSDRKGV NVPGSLIPMSAMTDKDRADLDFGLTLGVDWVALSFVQRAEDILEIKKIIDGRAGVIAKLEKPAAIERLEAIVNVSDAIMV ARGDLGVEMPPEQVPAIQKRIIRACRSAGKPVIVATQMLDSMVAAPVPTRAEASDVATAIYDGADAVMLSAESASGKYPV AAVKMMDSIISRTESDPYYRVAIDASQPPARANKADAIGSAVRHVADLLHIAVTVAYTSSGTSALSMARERPKAPIIALT PRLATARRLSLAWGLHAVMCHDVVDVTEMTDLACETARRQHFASRGQSVVISAGMPFGRSGTTNLLRIAELS
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=38.6503067484663, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=38.6503067484663, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=38.9452332657201, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI10835121, Length=498, Percent_Identity=37.14859437751, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI32967597, Length=498, Percent_Identity=37.14859437751, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=38.1944444444444, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=38.1944444444444, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=34.453781512605, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=34.453781512605, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128738, Length=212, Percent_Identity=33.9622641509434, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1787965, Length=467, Percent_Identity=37.2591006423983, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=35.2201257861635, Blast_Score=263, Evalue=2e-71, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=38.8090349075975, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=38.8090349075975, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=38.8090349075975, Blast_Score=292, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=38.8090349075975, Blast_Score=291, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=37.0901639344262, Blast_Score=291, Evalue=7e-79, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=32.6446280991736, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6324923, Length=484, Percent_Identity=33.4710743801653, Blast_Score=231, Evalue=3e-61, Organism=Drosophila melanogaster, GI24648964, Length=486, Percent_Identity=35.8024691358025, Blast_Score=278, Evalue=5e-75, Organism=Drosophila melanogaster, GI28571814, Length=486, Percent_Identity=35.8024691358025, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI24648966, Length=412, Percent_Identity=35.6796116504854, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24581235, Length=484, Percent_Identity=31.404958677686, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24646914, Length=280, Percent_Identity=36.4285714285714, Blast_Score=164, Evalue=8e-41,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50834; Mature: 50834
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRNRNAKIVATLGPASSDRDTIQKLYLNGADIFRLNFSHGTHEDHKRSLETIRDVEREA CCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GRPIGVLLDLQGPKLRLGKFANGPITLAEGDKFRLDLDCDRPGDQTRAPMPHPEIFKALS CCCEEEEEECCCCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH VQSSLLIDDGRIRLFVEKCGPDFAETRVVAGGTLSDRKGVNVPGSLIPMSAMTDKDRADL CCCCEEEECCCEEEEEECCCCCHHHCEEEECCCCCCCCCCCCCCCEEECHHCCCCCCCCC DFGLTLGVDWVALSFVQRAEDILEIKKIIDGRAGVIAKLEKPAAIERLEAIVNVSDAIMV CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE ARGDLGVEMPPEQVPAIQKRIIRACRSAGKPVIVATQMLDSMVAAPVPTRAEASDVATAI EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHH YDGADAVMLSAESASGKYPVAAVKMMDSIISRTESDPYYRVAIDASQPPARANKADAIGS HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH AVRHVADLLHIAVTVAYTSSGTSALSMARERPKAPIIALTPRLATARRLSLAWGLHAVMC HHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH HDVVDVTEMTDLACETARRQHFASRGQSVVISAGMPFGRSGTTNLLRIAELS HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MHRNRNAKIVATLGPASSDRDTIQKLYLNGADIFRLNFSHGTHEDHKRSLETIRDVEREA CCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GRPIGVLLDLQGPKLRLGKFANGPITLAEGDKFRLDLDCDRPGDQTRAPMPHPEIFKALS CCCEEEEEECCCCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH VQSSLLIDDGRIRLFVEKCGPDFAETRVVAGGTLSDRKGVNVPGSLIPMSAMTDKDRADL CCCCEEEECCCEEEEEECCCCCHHHCEEEECCCCCCCCCCCCCCCEEECHHCCCCCCCCC DFGLTLGVDWVALSFVQRAEDILEIKKIIDGRAGVIAKLEKPAAIERLEAIVNVSDAIMV CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE ARGDLGVEMPPEQVPAIQKRIIRACRSAGKPVIVATQMLDSMVAAPVPTRAEASDVATAI EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHH YDGADAVMLSAESASGKYPVAAVKMMDSIISRTESDPYYRVAIDASQPPARANKADAIGS HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH AVRHVADLLHIAVTVAYTSSGTSALSMARERPKAPIIALTPRLATARRLSLAWGLHAVMC HHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH HDVVDVTEMTDLACETARRQHFASRGQSVVISAGMPFGRSGTTNLLRIAELS HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA