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The map label for this gene is 71907734

Identifier: 71907734

GI number: 71907734

Start: 2276887

End: 2278368

Strand: Reverse

Name: 71907734

Synonym: Daro_2108

Alternate gene names: NA

Gene position: 2278368-2276887 (Counterclockwise)

Preceding gene: 71907735

Following gene: 71907731

Centisome position: 50.62

GC content: 57.35

Gene sequence:

>1482_bases
TTGGCAGTCGCGATCAATGCAATAGGCATTGACGACAAGGCGACCAAGATGAAGCGTTTTATCCAGGGCGAGAGCCGAAC
CCAAAGCACTTTGCTTCCCGCAGTGCTGGATGACTACATCGCGGATACCAACCCGGTTCGGGTTGTCGATGTCTTTGTTG
ATGAACTGTCGCTGGGAGTCTTGGGTTTTGCGAGCGTTGATCCGGCGACGACAGGGCGTCCTGCTTACCACCCGGCCGTG
TTGCTGAAGCTGTATATCTACGGCTACCTCAACCGTATTCCGTCGAGTCGGCGGCTGGAGCGGGAAGCCCAGCGCAACGT
CGAACTGATGTGGCTCACCGGGCGCCTGACGCCCGACCACAAGACTATCGCCAATTTCCGTAAGGACAACGGTCCAGCGA
TCTGCAAGGTCTGCCGGCAATTCGTGGTCATATGCCGGCAACTCAAACTATTCACGGAGGCGCTGGTCGCCATCGACGGC
AGCAAATTCAAAGCCGTCAATAATCGTGACCGGAATTTCACGAGCGCCAAATTACAGCGGCGGATGGCTGACATCGAGGC
GAGCATTCAGCGTTATCTAACTGACCTCGAGACTGCGGATCGGCAGGAACCGGAGATTGCCCAGGCCAAGGCGGCTCGGC
TCAATGACAAGATCGCGGCCCTGAAGGCACAGATGCAGCAACTCCAAGTCATCGAAACCCGGTTGGGGCAATCACCCGAC
GGGCAACTCTCTTTAACCGACCCCGATGCCCGCTCGATGAAAACTCGGAGCACCGGGATTGTGGGCTACAACGTGCAGAC
CGCAGTGGAAGCCAAACACCATCTGATTGTGGCACACGAAGTCACCAATGTTGGCATTGATCGGGATCTTCTGGTCGGCA
TGGCGAAGCGGGCACGAGAAGCCATTGGTGGCGGTGATCTGACAGTGATTGCCGATAGAGGCTACTTTAAAGGTGAGCAG
ATTCTGGCCTGCGAAGAAGCGGGGATCACGGCCATCGTCCCTAAAACCAGCACCTCGGCCGCTAAGGCTGAGGGCCGCTT
CGATAAAGCTGATTTCATCTATGACCCTACGGCCGATGAATACCGCTGCCCGGCCAATCAGCATCTCATCTGGCGCTTCG
CCCGCGTCGAAGGCGGTCTGATGATGAACCGTTACTGGAGTTCAGCCTGTCCACAATGTGCCATCAAGGCGCAATGTACG
CCGAGTGACTACCGGCGGGTCAGTCGCTGGGAACACCAGGCGGTGCTTGATGTCATGGAACGCCGGCTGGATCGCGCGCC
AGACAGCATGCGCATTCGCCGACAGACGGTGGAGCATCCGTTCGGGACCCTCAAGGCATGGATGGGCGCCACCCACTTTC
TGACCCGTACCCTGGAAAAGGTAAGAACGGAGATGAGTTTGCAGATACTCGCCTACAACCTGAAACGGGTGATGAATCTC
TTGGGCGTGAATGAGTTCATGGCAGCATTGCAGGCGGCCTGA

Upstream 100 bases:

>100_bases
AGGCGGCTTGGAGATCAGTTACCTGCCGTTCGAGCCTGACGACTTTTCATAGTCGCTATGTCCGCAGTTGGCCCAGACTG
TGTAAAAACGTGAACGAAAA

Downstream 100 bases:

>100_bases
CGGCCAGCCCGTCACCTTCAATTTCTCCCTGCCTTCCGCCTATGCCCAACGCCCACGCCAGCCACCCTTGCTACCTGGGG
TTTTTACACAGTCTGGGCCA

Product: transposase IS4

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; Transposase IS4 Family; ISPsy6 Transposase; Transposase Is4 Family Protein; ISCps6 Transposase; ISBma2 Transposase; ISNCY Family Transposase; Transposase For IS; ISPpu20 Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGVLGFASVDPATTGRPAYHPAV
LLKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDG
SKFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPD
GQLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRAREAIGGGDLTVIADRGYFKGEQ
ILACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCT
PSDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNL
LGVNEFMAALQAA

Sequences:

>Translated_493_residues
MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGVLGFASVDPATTGRPAYHPAV
LLKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDG
SKFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPD
GQLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRAREAIGGGDLTVIADRGYFKGEQ
ILACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCT
PSDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNL
LGVNEFMAALQAA
>Mature_492_residues
AVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGVLGFASVDPATTGRPAYHPAVL
LKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDGS
KFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPDG
QLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRAREAIGGGDLTVIADRGYFKGEQI
LACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCTP
SDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNLL
GVNEFMAALQAA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55256; Mature: 55125

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGV
CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
LGFASVDPATTGRPAYHPAVLLKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDH
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCH
KTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDGSKFKAVNNRDRNFTSAKLQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH
RMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GQLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRARE
CCEEECCCCHHHHHHCCCCEEEECHHHHHCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHH
AIGGGDLTVIADRGYFKGEQILACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADE
HCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCEEECCCCCC
YRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCTPSDYRRVSRWEHQAVLDVME
CCCCCCCCCEEEEEHHCCCEEEHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
RRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNL
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVNEFMAALQAA
HCHHHHHHHHHCC
>Mature Secondary Structure 
AVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVDVFVDELSLGV
EEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
LGFASVDPATTGRPAYHPAVLLKLYIYGYLNRIPSSRRLEREAQRNVELMWLTGRLTPDH
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCH
KTIANFRKDNGPAICKVCRQFVVICRQLKLFTEALVAIDGSKFKAVNNRDRNFTSAKLQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH
RMADIEASIQRYLTDLETADRQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GQLSLTDPDARSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRARE
CCEEECCCCHHHHHHCCCCEEEECHHHHHCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHH
AIGGGDLTVIADRGYFKGEQILACEEAGITAIVPKTSTSAAKAEGRFDKADFIYDPTADE
HCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCCCCCEEECCCCCC
YRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCTPSDYRRVSRWEHQAVLDVME
CCCCCCCCCEEEEEHHCCCEEEHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
RRLDRAPDSMRIRRQTVEHPFGTLKAWMGATHFLTRTLEKVRTEMSLQILAYNLKRVMNL
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVNEFMAALQAA
HCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA