Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907715

Identifier: 71907715

GI number: 71907715

Start: 2246135

End: 2246842

Strand: Reverse

Name: 71907715

Synonym: Daro_2089

Alternate gene names: NA

Gene position: 2246842-2246135 (Counterclockwise)

Preceding gene: 71907716

Following gene: 71907714

Centisome position: 49.92

GC content: 62.01

Gene sequence:

>708_bases
ATGCGTACCCGATTATCAAGCCGACATCCTGAAAAGCACCGGACAACGCGGATCGGCTGGCTACGGGCGGCGGTGCTTGG
TGCCAACGACGGCATTGTGTCCACGGCCAGTCTGATCCTGGGTGTTGCAGCGGCCGGCGTGGATGCCAAGGCGATCCTGA
TTTCCGGTGTTGCGGGACTGGTAGCCGGTGCCTCATCGATGGCTGCCGGTGAATATGTCTCGGTCAGTTCCCAGTCGGAT
ACCGAACGCGCCGATTTGACACGTGAAAAAGAGGAATTGGCGACTGATCCTGCGCATGAACATGCGGAGATGGCAGCGAT
TTACGTCAAGCGTGGTCTTGATCCAGCGCTTGCTGCCGTGGTGGCCACGCAACTGACGGCACACGATGCGCTGGGCGCGC
ATGCCCGCGACGAGCTTGGGATTACCGATACCTCGACCGCCCGGCCGCTCCAGGCGGCACTGAGTTCGGCGCTGGCATTT
TCGCTGGGGGCCGCATTGCCGTTGTTGGTGGTATTGCTGGCACCGGGTCATTGGCTGGCCTTGGCGGTGGCGGGAAGTGC
ATTGCTGTTTCTTGCTGTTCTAGGGGCACTATCCGCCGCCGTCGGCGGTGCTCCGGTGCTCATGGCAACCCTACGGGTGA
CCCTTTGGGGCGCGCTGGCGATGGCCACGACTGCAGGAATTGGCGCCTTGTTCGGGGTTAGTGCTTAA

Upstream 100 bases:

>100_bases
AGTTGTTCCATGGCTATGGGGAGACCCTGCTAGACTACAACCAGCGGCAGACCAGCCTGGGGCTGGGGTTGACGCTGTTT
CAGTTCTGACTCGCTCTTCA

Downstream 100 bases:

>100_bases
GTCTTCTGGCGCTCATCGCGAAGCGTTTTTTCCTTATGTGCGCCAAGGGACAGATGGCTTGGCACTGAGCCCATAAGCTG
GGTTCATCCGATCCCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Membrane Associated Protein; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRTRLSSRHPEKHRTTRIGWLRAAVLGANDGIVSTASLILGVAAAGVDAKAILISGVAGLVAGASSMAAGEYVSVSSQSD
TERADLTREKEELATDPAHEHAEMAAIYVKRGLDPALAAVVATQLTAHDALGAHARDELGITDTSTARPLQAALSSALAF
SLGAALPLLVVLLAPGHWLALAVAGSALLFLAVLGALSAAVGGAPVLMATLRVTLWGALAMATTAGIGALFGVSA

Sequences:

>Translated_235_residues
MRTRLSSRHPEKHRTTRIGWLRAAVLGANDGIVSTASLILGVAAAGVDAKAILISGVAGLVAGASSMAAGEYVSVSSQSD
TERADLTREKEELATDPAHEHAEMAAIYVKRGLDPALAAVVATQLTAHDALGAHARDELGITDTSTARPLQAALSSALAF
SLGAALPLLVVLLAPGHWLALAVAGSALLFLAVLGALSAAVGGAPVLMATLRVTLWGALAMATTAGIGALFGVSA
>Mature_235_residues
MRTRLSSRHPEKHRTTRIGWLRAAVLGANDGIVSTASLILGVAAAGVDAKAILISGVAGLVAGASSMAAGEYVSVSSQSD
TERADLTREKEELATDPAHEHAEMAAIYVKRGLDPALAAVVATQLTAHDALGAHARDELGITDTSTARPLQAALSSALAF
SLGAALPLLVVLLAPGHWLALAVAGSALLFLAVLGALSAAVGGAPVLMATLRVTLWGALAMATTAGIGALFGVSA

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23610; Mature: 23610

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRLSSRHPEKHRTTRIGWLRAAVLGANDGIVSTASLILGVAAAGVDAKAILISGVAGL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAGASSMAAGEYVSVSSQSDTERADLTREKEELATDPAHEHAEMAAIYVKRGLDPALAAV
HHCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
VATQLTAHDALGAHARDELGITDTSTARPLQAALSSALAFSLGAALPLLVVLLAPGHWLA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LAVAGSALLFLAVLGALSAAVGGAPVLMATLRVTLWGALAMATTAGIGALFGVSA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTRLSSRHPEKHRTTRIGWLRAAVLGANDGIVSTASLILGVAAAGVDAKAILISGVAGL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAGASSMAAGEYVSVSSQSDTERADLTREKEELATDPAHEHAEMAAIYVKRGLDPALAAV
HHCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
VATQLTAHDALGAHARDELGITDTSTARPLQAALSSALAFSLGAALPLLVVLLAPGHWLA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LAVAGSALLFLAVLGALSAAVGGAPVLMATLRVTLWGALAMATTAGIGALFGVSA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA