Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907690

Identifier: 71907690

GI number: 71907690

Start: 2220090

End: 2222456

Strand: Reverse

Name: 71907690

Synonym: Daro_2063

Alternate gene names: NA

Gene position: 2222456-2220090 (Counterclockwise)

Preceding gene: 71907691

Following gene: 71907689

Centisome position: 49.38

GC content: 61.98

Gene sequence:

>2367_bases
ATGCTGACCACACACACGCCGCTCGCCGCCGACGAACTGGATCGAATGAATGCCTGGTGGCGCGCCGCCAACTATCTTTC
GGTCGGCCAGATCTACCTGCTCGACAACCCGCTGCTCAAAACACCACTCACGCTGGCGCACATCAAGCCGCGTCTATTGG
GCCACTGGGGTACGACGCCGGGACTGAACTTCATCTACGTGCATATGAACCGGGTGATCCGGCAGCACGGTCTGAACATG
ATCTTCATTGCCGGCCCCGGCCACGGAGGCCCGGGCGTGGTGGCGAATACCTGGCTCGAAGGCAGCTACAGCGAGTTTTA
CCAGAATATTTCACAGGACGAGGAGGGCATGCGCCGGCTGTTCCGCCAGTTCTCCTTCCCTGGCGGCATTCCCAGTCATG
CCTCGCCGGATACACCGGGATCGATCCACGAAGGCGGCGAACTCGGTTACGCGCTGTTCCATGCCTATGGTGCGGTGTTC
GACAACCCGCACCTGATCACCTGTTGCGTCGTTGGCGATGGCGAAGCGGAAACCGGGCCGCTGGCCACCTCATGGCACTC
CAACAAATTCCTCAATCCGCGCACCGACGGCGCCGTGCTGCCCATCCTGCATCTCAACGGCTACAAGATCGCCAACCCGA
CCATCCTGGCCCGGATCAGCCACACCGAACTGGAATGCCTGTTCGTGGGTTATGGCTACCAGCCGCTCTTTGTCGAGGGC
GACGATCCGCAAACCATGCATCAGTTGATGGCAGCAGCCGTCGACACGGCAATCGCCAGCATTGCCGCCATCCAGCGCCG
GGCGCGTGAAGGCGGCGACGAAAGCCGGCCGCGCTGGCCGATGATCATCCTGCGTTCGCCAAAAGGCTGGACCGGGCCGA
AAACAGTCGACGGCAAGCAGAGCGAAGGCTCCTGGCGTTCGCATCAGGTGCCGTTCAGCGACATGGACAAGCCGGAGCAT
GTGCAATTGCTGGGCGAATGGATGGCCTCCTACAAACCCGCCGAGCTGTTCGACAAGGATGGCCGGCTGATGCCCGAGAT
CGCCGCACTGGCCCCCGCTGGGCAACGGCGCATGGGCGCCAACCTGCACGCCAACGGTGGCGCCTTGCTGCGTGACCTGC
GTCTGCCGGATTTTCGCGACTACGCCGTGGCGGTGCCGACGCCAGGTGGCTCAGTGGCCGAGGCGACGCGCGCCATGGGC
GTCTTCCTGCGCGATGTGATGCGCCAGAACCCGGACAATTTCCGCGTCTTCGGTCCGGATGAAACCGCTTCCAACCGCCT
CGGCGCGCTGTTCGAAGTCACCAACCGGACATGGATGGCCGAACACCTGGCTGGTGACGACCATCTGGCGCCCGATGGCC
GGGTCATGGAAGTGCTTTCCGAACACGCCTGCCAGGGCTGGCTCGAAGGCTACCTGCTGACCGGCCGTCACGGCCTGTTC
TCCTGCTACGAAGCCTTCATCCACATCGTCGATTCGATGTTCAACCAGCACGCCAAGTGGCTGAAGATGTGTGGCGAGAT
TCCCTGGCGGCGGCCGATTGCCTCGCTCAACATCCTGCTCACCTCGCACGTCTGGCGCCAGGATCACAACGGTTTCTCGC
ATCAGGACCCGGGCTTCATCGACCACGTGGTCAACAAGAAGGCCGACATCATCCGCGTTTATCTGCCGCCCGATGCCAAC
ACCCTGCTTTACGTCACCGACCGCTGCCTGAAGAGCCGCAATCTGGTCAATGTCATCGTCGCCGGCAAGCAGCCGGACTG
GCAGTGGCTGGACATGGAAGCCGCGATCAACCATGCCAGCGCCGGTATCGGCCTGTGGGAATGGGCTTGCAACGACCAGC
CGGGCGAACCGGACATCGTGCTCGCCTCGGCCGGGGATGTACCGACGCTGGAAATGCTGGCTGCCATCGACATCCTGCAC
CGCATGGTGCCGACCCTGAAGATCCGCTATATCAATGTTGTCGACCTGATGACCCTGCAGCCGCAGGAAGAGCATCCGCA
TGGTCTGTCGAGCGACGAATTCAATTCGCTGTTCACCACCGACAAGCCGATCATCTTTGCTTACCACGGCTATCCGTGGC
TGATTCACCGTCTGACCTATCGGCGCACCAACACCAATCTGCATGTGCGCGGCTACAAGGAAGAGGGCACCACGACGACG
CCTTTCGACATGGTCGTGCTCAACAATCTGGACCGCTACCATCTGGTCATGGACGTGGCCAAGCGGGTGCCGAAACTGCA
CGCCCAGGCGGCGCACATCAAGCAGGCCATGCGTGACAAGCTCAACCAGCACACGCAATACATCCTCGAACACGGCGAAG
ACATGCCGGAAATCCTCGACTGGCAATGGCCGGGAGCGAAGTCATGA

Upstream 100 bases:

>100_bases
CGGCGCTGCGCTGGCCCTGCAACTGCTCGACGAACTCGAAGCCCTGCAAGCCCGGCTGCGCAAAGCCGGCGCTCTATGAA
AACGGAACAAGGATAAGCCA

Downstream 100 bases:

>100_bases
ATAAATCCAAAAGCACCAACCCGCTGCTGGCGATCAAGGCGCTTGGCCAGCACCTCTGGCTCGACAACCTGTCGCGCACC
TTGTTGCGCGAAGGCGGCCT

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 788; Mature: 788

Protein sequence:

>788_residues
MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM
IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF
DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG
DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH
VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG
VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF
SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN
TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH
RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT
PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS

Sequences:

>Translated_788_residues
MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM
IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF
DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG
DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH
VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG
VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF
SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN
TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH
RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT
PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS
>Mature_788_residues
MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTPGLNFIYVHMNRVIRQHGLNM
IFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRLFRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVF
DNPHLITCCVVGDGEAETGPLATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG
DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQSEGSWRSHQVPFSDMDKPEH
VQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGANLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMG
VFLRDVMRQNPDNFRVFGPDETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF
SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADIIRVYLPPDAN
TLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHASAGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILH
RMVPTLKIRYINVVDLMTLQPQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT
PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILDWQWPGAKS

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 88412; Mature: 88412

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTP
CCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCHHHCCCHHHHHCHHHHCCCCCCC
GLNFIYVHMNRVIRQHGLNMIFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRL
CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH
FRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVFDNPHLITCCVVGDGEAETGP
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
LATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG
EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCEEEEEEC
DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
SEGSWRSHQVPFSDMDKPEHVQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCHHCCC
NLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMGVFLRDVMRQNPDNFRVFGPD
CEECCCCHHEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
ETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF
CCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHH
SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DHVVNKKADIIRVYLPPDANTLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHAS
HHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHC
AGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILHRMVPTLKIRYINVVDLMTLQ
CCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC
PQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT
CCCCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCCCC
PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILD
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
WQWPGAKS
CCCCCCCC
>Mature Secondary Structure
MLTTHTPLAADELDRMNAWWRAANYLSVGQIYLLDNPLLKTPLTLAHIKPRLLGHWGTTP
CCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCHHHCCCHHHHHCHHHHCCCCCCC
GLNFIYVHMNRVIRQHGLNMIFIAGPGHGGPGVVANTWLEGSYSEFYQNISQDEEGMRRL
CCEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHH
FRQFSFPGGIPSHASPDTPGSIHEGGELGYALFHAYGAVFDNPHLITCCVVGDGEAETGP
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC
LATSWHSNKFLNPRTDGAVLPILHLNGYKIANPTILARISHTELECLFVGYGYQPLFVEG
EEECCCCCCCCCCCCCCCEEEEEEECCEEECCCEEEEEEECCCEEEEEEECCCEEEEEEC
DDPQTMHQLMAAAVDTAIASIAAIQRRAREGGDESRPRWPMIILRSPKGWTGPKTVDGKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
SEGSWRSHQVPFSDMDKPEHVQLLGEWMASYKPAELFDKDGRLMPEIAALAPAGQRRMGA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHCCCCCHHCCC
NLHANGGALLRDLRLPDFRDYAVAVPTPGGSVAEATRAMGVFLRDVMRQNPDNFRVFGPD
CEECCCCHHEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
ETASNRLGALFEVTNRTWMAEHLAGDDHLAPDGRVMEVLSEHACQGWLEGYLLTGRHGLF
CCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHH
SCYEAFIHIVDSMFNQHAKWLKMCGEIPWRRPIASLNILLTSHVWRQDHNGFSHQDPGFI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DHVVNKKADIIRVYLPPDANTLLYVTDRCLKSRNLVNVIVAGKQPDWQWLDMEAAINHAS
HHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHC
AGIGLWEWACNDQPGEPDIVLASAGDVPTLEMLAAIDILHRMVPTLKIRYINVVDLMTLQ
CCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC
PQEEHPHGLSSDEFNSLFTTDKPIIFAYHGYPWLIHRLTYRRTNTNLHVRGYKEEGTTTT
CCCCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCCCC
PFDMVVLNNLDRYHLVMDVAKRVPKLHAQAAHIKQAMRDKLNQHTQYILEHGEDMPEILD
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
WQWPGAKS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA