| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is cbpM [H]
Identifier: 71907691
GI number: 71907691
Start: 2222478
End: 2222798
Strand: Reverse
Name: cbpM [H]
Synonym: Daro_2064
Alternate gene names: 71907691
Gene position: 2222798-2222478 (Counterclockwise)
Preceding gene: 71907692
Following gene: 71907690
Centisome position: 49.38
GC content: 64.49
Gene sequence:
>321_bases ATGGACAAAGACAAGATGCTGCCGCAACCGAGCGCGATCATTCTTGAAGAGCAAACCGACCTGACGCTGAGTGACGTCAG TCAGGCCTGCGCCGTGCGCGTCGAAACCATCGTCGAACTGGTCGACGAGGGGGTACTCACGCCCAGCGGCCGGGAGCCGC ATCGCTGGCTTTTTACCGGCACCCACCTGCGTCGCGCCACGGTGGCCATCCGTCTGCAGCGTGATCTCGGCGTCAATCTG GCCGGCGCTGCGCTGGCCCTGCAACTGCTCGACGAACTCGAAGCCCTGCAAGCCCGGCTGCGCAAAGCCGGCGCTCTATG A
Upstream 100 bases:
>100_bases TCTTGCCGGTGGCGGAAAGCGAGGCCGACAAGGCCTTCTACGCCAGTATGGCCGAGCAGTTCAAATCATTCAAACCGCGG TCTAGACTGGGAGCGTAAGC
Downstream 100 bases:
>100_bases AAACGGAACAAGGATAAGCCAATGCTGACCACACACACGCCGCTCGCCGCCGACGAACTGGATCGAATGAATGCCTGGTG GCGCGCCGCCAACTATCTTT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MDKDKMLPQPSAIILEEQTDLTLSDVSQACAVRVETIVELVDEGVLTPSGREPHRWLFTGTHLRRATVAIRLQRDLGVNL AGAALALQLLDELEALQARLRKAGAL
Sequences:
>Translated_106_residues MDKDKMLPQPSAIILEEQTDLTLSDVSQACAVRVETIVELVDEGVLTPSGREPHRWLFTGTHLRRATVAIRLQRDLGVNL AGAALALQLLDELEALQARLRKAGAL >Mature_106_residues MDKDKMLPQPSAIILEEQTDLTLSDVSQACAVRVETIVELVDEGVLTPSGREPHRWLFTGTHLRRATVAIRLQRDLGVNL AGAALALQLLDELEALQARLRKAGAL
Specific function: Interacts with CbpA and inhibits both the DnaJ-like co- chaperone activity and the DNA binding activity of CbpA. Together with CbpA, modulates the activity of the DnaK chaperone system. Does not inhibit the co-chaperone activity of DnaJ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbpM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022835 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11610; Mature: 11610
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDKMLPQPSAIILEEQTDLTLSDVSQACAVRVETIVELVDEGVLTPSGREPHRWLFTG CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC THLRRATVAIRLQRDLGVNLAGAALALQLLDELEALQARLRKAGAL CCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKDKMLPQPSAIILEEQTDLTLSDVSQACAVRVETIVELVDEGVLTPSGREPHRWLFTG CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC THLRRATVAIRLQRDLGVNLAGAALALQLLDELEALQARLRKAGAL CCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA