| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907664
Identifier: 71907664
GI number: 71907664
Start: 2186460
End: 2187542
Strand: Reverse
Name: 71907664
Synonym: Daro_2036
Alternate gene names: NA
Gene position: 2187542-2186460 (Counterclockwise)
Preceding gene: 71907669
Following gene: 71907663
Centisome position: 48.6
GC content: 55.22
Gene sequence:
>1083_bases ATGCAGCTTCATTGGGACATCTTTTGCCGGGTTATCGACAACTACGGCGACATCGGCATTTGCTGGCGCCTGGCCAGGCA ATTGGCGGTCGAACATGGCCGTCGAGTCAGATTGTGGGTGGATGATCCATCCAGCTTGCAGCCGCTGTGCCCAGCCGTCG ACCCTGCAATTGATGGATATTCGTGCCACGGTGTCGAAATCCGTCACTGGAGAGAAAACTCCTTGTTTGACCGGCCTGCC GAAGTTGTTATCGAAGCCTTTGCCTGTGATTTACCGAATGCCTATCTTGCCTCGATGGCCAGCGCCGATCCAAAGCCCTG CTGGATCAACCTGGAATACCTGACTGCCGAATCGTGGGCTGATGGCTGTCACGGCATGGCCTCGCCCCACCCCTCTTTAC CCTTGGTCAAGTATTTCTTTTTCCCGGGTTTTTCAGGGGCAGGAGGTGGCTTGCTGCGGGAAAAGAATCTGCTTGATGAA CGTGATCGCAGCCTTCTTCAAAACGGAGGCAGCAGCGAGTTCGAAATCAGTCTGTTCTGCTATGACACGGCACCGATCGG AGGATTGATCGATGCGCTAGCAAAAATGTCCAAGCCTGTAACCTGCCATGTGCCACCGGGGAAACCCCTGGCAGCGGTCA GCACTTACCTTGGCGGAGCCGGGCCATGGCAGTGCGGAAATGCCTTGATCCGGCCTATCCCCTTCATGCCAATGGACGAT TACGATCGCCTTTTGTGGCGATGTGATGTCAATTTTGTCCGCGGCGAGGATTCGTTCGTTCGTGCCCAGTGGGCCGGCAA GCCATTCGTCTGGCAGATATATTTTCAGGACGAAGATGCCCATCTGATCAAACTCGAGGCATTCCTTGAGCGCTATTGTG CCGGCATGAACAAGACTCTGGAGGCCGTGGTCCGCGAGATGTTCCTGGCGTGGAACACTGGAAGCAATGTCGAGTTGGCG TGGCTGAATTTCATGGCTAACTACGCGGATATTGCCCGATACAGCAAGCACTGGGCCGAAACTCAAGCCTCTCAGCCCGA CTTGGCATCGGCCCTCGTCAAATTCTGTGCTGCCAAGGTATAA
Upstream 100 bases:
>100_bases GTTGACGAATGGTGGCCAGGTGTTCCGCCAGCCGTGAACAGGCGATGCAGTTGGTGGGATCTTGAAATCTTGACATGGCG GGAATGTTAGCATGGCGGCC
Downstream 100 bases:
>100_bases TTTAACGTTATCCTTTTCCGATCTTAGAGAATCCCGTATGAAAACCGCAATGGAACTCCGCTCCGGCAACGTCATCATGG TTGGTGCCGACCCGCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MQLHWDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGYSCHGVEIRHWRENSLFDRPA EVVIEAFACDLPNAYLASMASADPKPCWINLEYLTAESWADGCHGMASPHPSLPLVKYFFFPGFSGAGGGLLREKNLLDE RDRSLLQNGGSSEFEISLFCYDTAPIGGLIDALAKMSKPVTCHVPPGKPLAAVSTYLGGAGPWQCGNALIRPIPFMPMDD YDRLLWRCDVNFVRGEDSFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTLEAVVREMFLAWNTGSNVELA WLNFMANYADIARYSKHWAETQASQPDLASALVKFCAAKV
Sequences:
>Translated_360_residues MQLHWDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGYSCHGVEIRHWRENSLFDRPA EVVIEAFACDLPNAYLASMASADPKPCWINLEYLTAESWADGCHGMASPHPSLPLVKYFFFPGFSGAGGGLLREKNLLDE RDRSLLQNGGSSEFEISLFCYDTAPIGGLIDALAKMSKPVTCHVPPGKPLAAVSTYLGGAGPWQCGNALIRPIPFMPMDD YDRLLWRCDVNFVRGEDSFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTLEAVVREMFLAWNTGSNVELA WLNFMANYADIARYSKHWAETQASQPDLASALVKFCAAKV >Mature_360_residues MQLHWDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGYSCHGVEIRHWRENSLFDRPA EVVIEAFACDLPNAYLASMASADPKPCWINLEYLTAESWADGCHGMASPHPSLPLVKYFFFPGFSGAGGGLLREKNLLDE RDRSLLQNGGSSEFEISLFCYDTAPIGGLIDALAKMSKPVTCHVPPGKPLAAVSTYLGGAGPWQCGNALIRPIPFMPMDD YDRLLWRCDVNFVRGEDSFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTLEAVVREMFLAWNTGSNVELA WLNFMANYADIARYSKHWAETQASQPDLASALVKFCAAKV
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40378; Mature: 40378
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLHWDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGY CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC SCHGVEIRHWRENSLFDRPAEVVIEAFACDLPNAYLASMASADPKPCWINLEYLTAESWA EECCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEECCCHH DGCHGMASPHPSLPLVKYFFFPGFSGAGGGLLREKNLLDERDRSLLQNGGSSEFEISLFC CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE YDTAPIGGLIDALAKMSKPVTCHVPPGKPLAAVSTYLGGAGPWQCGNALIRPIPFMPMDD ECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCHHCCHHHCCCCCCCCCH YDRLLWRCDVNFVRGEDSFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTL HHHHEEHCCCEEEECCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHH EAVVREMFLAWNTGSNVELAWLNFMANYADIARYSKHWAETQASQPDLASALVKFCAAKV HHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQLHWDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGY CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC SCHGVEIRHWRENSLFDRPAEVVIEAFACDLPNAYLASMASADPKPCWINLEYLTAESWA EECCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEECCCHH DGCHGMASPHPSLPLVKYFFFPGFSGAGGGLLREKNLLDERDRSLLQNGGSSEFEISLFC CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE YDTAPIGGLIDALAKMSKPVTCHVPPGKPLAAVSTYLGGAGPWQCGNALIRPIPFMPMDD ECCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCHHCCHHHCCCCCCCCCH YDRLLWRCDVNFVRGEDSFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTL HHHHEEHCCCEEEECCCCEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHH EAVVREMFLAWNTGSNVELAWLNFMANYADIARYSKHWAETQASQPDLASALVKFCAAKV HHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA