Click here to switch to the map view.

The map label for this gene is 71907669

Identifier: 71907669

GI number: 71907669

Start: 2192900

End: 2193925

Strand: Reverse

Name: 71907669

Synonym: Daro_2041

Alternate gene names: NA

Gene position: 2193925-2192900 (Counterclockwise)

Preceding gene: 71907670

Following gene: 71907664

Centisome position: 48.74

GC content: 62.18

Gene sequence:

>1026_bases
ATGAATATTGTCACTGTAGGCATCGATCTCGCCAAGAATGTATTCGCTTTGCATGCCGTTGACCAGTATGGCAAAGCCAT
TTTTATCAAGCCAAAAGTAGCGCGCGGCCAATTGCTGGAAATGGTCGCCCAGCTGCCGCCCTGCCTGATCGGCATGGAAG
CCTGCTCCGGTGCTCACCATTGGGCGAGAGAGTTCAGCCGCGTCGGCCACACCGTGAAGTTGATGGCACCCAAGTTTGTG
GTGCCGTACCGGATGAGCGGCAAGCGCGGCAAGAACGACGCCGCCGATGCCGCGGCCATCTGCGAGGCCGTCACGCGGCC
GAACATGCGTTTCGTCCCGGTCAAGGATGTCGATCAGCAGGCCATCCTCTGCCTGCACCGCACCCGGCAAGGTTTTGTTG
AAGAACGCACCGCGCTCTACAACCGCTTGCGCGGCCTGATCAGCGAGTTCGGCATTGTGCTGCCACAGAAAGTCGAACGC
CTGCGCCGGGAAATCGGTGCCCACCTCGAAGCACTGCCCGGCTGGGCCAACCGCTGTGTCGGTGATCTGCTGGCTCACGC
CGACCGACTGAATGAACACATCGACGAGTACGACAAAGCCATCGCCCTGGCCGCCAAACAAGACCAGCGGAGCCGGCAGC
TCATGCAACTTCCTGGCATCGGCCCGACCACCGCCAGCGCCCTGGTTGCCAGCCTGGGCGGCGGCCACGACTTCAAGAAT
GGTCGGCAGCTTGCCGCCTGGGTCGGGCTCGTTCCCGGCCAATACAGCAGTGGCGGCAAAGCCCGGCTGGGCAGGATCAC
CAAGGCCGGCGACGCCTACCTGCGCAGTCTGCTCGTCATGGGCGGCCGATCTGTTCTCGCCGGACTCGGTGACAAGCAAG
ACCGCTTCAGTCGTTGGGCCAGAAATCTAGTCGAGCGACGCGGGTACTGGAAAGCGGCGGTTGCCATCGCCGCCAAGAAC
TTGCGACTCGCCTGGGCGGTCATGCACTACGGAGAGGAATTTCGGCGTATCGAAGATCTCGCCTGA

Upstream 100 bases:

>100_bases
AGGGACTTCCCCGTCCCGAACTAGCGGCGGAAGCCGCAGGCAGCGTGAGCTGCCATGATTGAGTTTCCACACTGAATCAT
TTGCTCGAAAGGGGAAGTCC

Downstream 100 bases:

>100_bases
AAAGCAAAAAGCGTTTGCAAGGAAAAACCTGAAAGGAATCACCGGCCGTTCGCTGGCGGCCCAAGACCAGCGAAGCACTG
CCAGCGTTGATGTGAAGCGG

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLIGMEACSGAHHWAREFSRVGHTVKLMAPKFV
VPYRMSGKRGKNDAADAAAICEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEFGIVLPQKVER
LRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKAIALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKN
GRQLAAWVGLVPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWARNLVERRGYWKAAVAIAAKN
LRLAWAVMHYGEEFRRIEDLA

Sequences:

>Translated_341_residues
MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLIGMEACSGAHHWAREFSRVGHTVKLMAPKFV
VPYRMSGKRGKNDAADAAAICEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEFGIVLPQKVER
LRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKAIALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKN
GRQLAAWVGLVPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWARNLVERRGYWKAAVAIAAKN
LRLAWAVMHYGEEFRRIEDLA
>Mature_341_residues
MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLIGMEACSGAHHWAREFSRVGHTVKLMAPKFV
VPYRMSGKRGKNDAADAAAICEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEFGIVLPQKVER
LRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKAIALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKN
GRQLAAWVGLVPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWARNLVERRGYWKAAVAIAAKN
LRLAWAVMHYGEEFRRIEDLA

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37633; Mature: 37633

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLIGMEACSGAHH
CCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHEEHHHHCCHHH
WAREFSRVGHTVKLMAPKFVVPYRMSGKRGKNDAADAAAICEAVTRPNMRFVPVKDVDQQ
HHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHH
AILCLHRTRQGFVEERTALYNRLRGLISEFGIVLPQKVERLRREIGAHLEALPGWANRCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GDLLAHADRLNEHIDEYDKAIALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
GRQLAAWVGLVPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWA
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
RNLVERRGYWKAAVAIAAKNLRLAWAVMHYGEEFRRIEDLA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLIGMEACSGAHH
CCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHEEHHHHCCHHH
WAREFSRVGHTVKLMAPKFVVPYRMSGKRGKNDAADAAAICEAVTRPNMRFVPVKDVDQQ
HHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHH
AILCLHRTRQGFVEERTALYNRLRGLISEFGIVLPQKVERLRREIGAHLEALPGWANRCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
GDLLAHADRLNEHIDEYDKAIALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
GRQLAAWVGLVPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWA
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHH
RNLVERRGYWKAAVAIAAKNLRLAWAVMHYGEEFRRIEDLA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]