| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907543
Identifier: 71907543
GI number: 71907543
Start: 2056737
End: 2057543
Strand: Reverse
Name: 71907543
Synonym: Daro_1914
Alternate gene names: NA
Gene position: 2057543-2056737 (Counterclockwise)
Preceding gene: 71907544
Following gene: 71907540
Centisome position: 45.71
GC content: 62.58
Gene sequence:
>807_bases ATGCAAGTGTCCACAAAACCCCCTGTAATTCACCACCACCCAGCCCATCACCCAAGCACCAAGCCGCCGTTGCTTTTCGT CCATGGTGGTTACAGCAACGCCGCGCTGTGGGGCGTTCGCTTCATTCCGTATTTCCAGGATCAGGGTTACGACTGCTACG CGCTTGAGCTTTCCGGGCACGGCAGCCGACCGGCGGATCGGGTGCATCTGGACGATTTCGGCCTCGACGATTTCGTCGCA GACCTGGCGGCTGCCGTGGCCAGTCTGCTCGCATTGCCGGTGCTGATTGCCCATTCGATGGGCTGTCTGGTTTGCCAACG ATTTCTCGAACGGGGCACGGCGCGGGCCGTGGCTTTCCTGGCGCCGGTGCCGCCGACCGGAACGGGGGGCACGGTCAGCC GCTTCGCGATGACCATGCCGGATTTCTTTGCCGAGTTGCCGAATGCGGTCAACGGCACGGCCAGCGAAAAAACCATGCGC ACGATGGCCAGTGTCTATTTTTCGCCAAGCATGGCGCCGGAAGAAACCGTCCAGTATCTGCCGCTGATCCAGCCGGAATC GGAAAAGGCAGTGGCCGAAATGCTGACTGCGCCCTTGCGCATCGCCCGTGGCCGGGCGCGCATTCCAGCGCTGGTCATGG GCGGTTCGGCCGACCAGGTCTTCCCGGCCTCAATGCTTCACTTCACGGCTGCCTCGTGGAATGCCAAAACGCAGGTCATT GCGGGGGCCGGCCACATGCTGATGCTCGACCCGCAATGGCCGGACGCCGCCGTCCAGCTTGAGGAATGGCTGGATAGCCT GAACTGA
Upstream 100 bases:
>100_bases AGACGTTAGGCAATTCGCATAAACAAAGGGGTCGGAGTGAATTAAGAATCAAAATAACGAAGCTATCTCTATCTGCCCCC CCCCTCTTTTAACCAAGAAT
Downstream 100 bases:
>100_bases CTGATCAAATTGGGCGGAGCAAATTCGAATCCTTTTTTGCTCCGCCCATTTTTTATTCAGCCACCCTCGCCCACGGCACC ATTGCCATGACTCAGGCTGA
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase; Acetone-Cyanohydrin Lyase; Hydrolase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI AGAGHMLMLDPQWPDAAVQLEEWLDSLN
Sequences:
>Translated_268_residues MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI AGAGHMLMLDPQWPDAAVQLEEWLDSLN >Mature_268_residues MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGHGSRPADRVHLDDFGLDDFVA DLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFLAPVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMR TMASVYFSPSMAPEETVQYLPLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI AGAGHMLMLDPQWPDAAVQLEEWLDSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28948; Mature: 28948
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGH CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEEHHEEEEEEECCCCCEEEEEEECCC GSRPADRVHLDDFGLDDFVADLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFL CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE APVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMRTMASVYFSPSMAPEETVQYL ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC PLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE AGAGHMLMLDPQWPDAAVQLEEWLDSLN ECCCCEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQVSTKPPVIHHHPAHHPSTKPPLLFVHGGYSNAALWGVRFIPYFQDQGYDCYALELSGH CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEEHHEEEEEEECCCCCEEEEEEECCC GSRPADRVHLDDFGLDDFVADLAAAVASLLALPVLIAHSMGCLVCQRFLERGTARAVAFL CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEE APVPPTGTGGTVSRFAMTMPDFFAELPNAVNGTASEKTMRTMASVYFSPSMAPEETVQYL ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC PLIQPESEKAVAEMLTAPLRIARGRARIPALVMGGSADQVFPASMLHFTAASWNAKTQVI CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE AGAGHMLMLDPQWPDAAVQLEEWLDSLN ECCCCEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA