| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907460
Identifier: 71907460
GI number: 71907460
Start: 1969670
End: 1970371
Strand: Reverse
Name: 71907460
Synonym: Daro_1831
Alternate gene names: NA
Gene position: 1970371-1969670 (Counterclockwise)
Preceding gene: 71907465
Following gene: 71907459
Centisome position: 43.78
GC content: 63.25
Gene sequence:
>702_bases ATGGACCATAGCCACCACCACGCCATTGCCGAATTTTCGTACTGGCTTGCCTTCATGACCGGCCTGCTCGGTAGCGGACA TTGCCTGGGCATGTGCGGCGGGCTGGTGTCCGGTTTTTTCATGAAGCTCGGCGCCAAGGGGGTATGGCCCTATCTGGCTT ATCACGGGGCACGGGTCGGGATTTATACCGTGGTCGGGCTGATTGCCGCTGCGATCGGTGCGGTACTGGTGTCGACTGGC CAGTTCGGCAAATTACAGGGCGTGCTGCAAATCGTTGCCGGGTTCGTCGTCATCCTGCTCGGCCTGGATCTGCTCGGTGT TTCCCCCCTCCGCAACCGCCTGGGCTTCGCACCCATCGCCTGGCTGCGCAAGCAGTTCACGCTGGCTGTGCAGAAAGGCC CGGTCGTTGGCGCACTGATTGGTGGCGCGATCAACGGCCTGATGCCCTGCTCGATGACCATGGCGATGGCCGTCAAGGCC ACCACCGCACCGTCGGTGCTGGAAGGCGGCCTGCTGATGCTGGCCTTCGGCGCCGGCACCCTGCCCTCGATGCTCTCCGC CTCCTTCTTGTTCGGCAAGTTGGGGCCGAAGCTGCGCGGCTGGTTGTTGAAAGGTGCCGCGCTGTTCGTCATTGCCCTGG GCATATCGACGCTCTGGCAGGGGGTCCGCTATTACGCGATCATGCGCAACCTGCTGGGCTGA
Upstream 100 bases:
>100_bases ATCCGGGCGAGAAATGGCCAAGTCGCATCCAGATCAAGGCGGACCTCCCGGTATTTGCTAGACTGCCCGGACCCGCCTTT CGACTCTCCCACCGGACTCC
Downstream 100 bases:
>100_bases GTGCGACACTATGTCGCAGGCCGGGCACATCACTGAGCGCTAATATTTCACGGCCAAAAATAGCGATAGGGAGAACAACA TGAAACGCCGTGACCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG
Sequences:
>Translated_233_residues MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG >Mature_233_residues MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24363; Mature: 24363
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH IYTVVGLIAAAIGAVLVSTGQFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH WLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKATTAPSVLEGGLLMLAFGAGT HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHEEEECCCC LPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH IYTVVGLIAAAIGAVLVSTGQFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH WLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKATTAPSVLEGGLLMLAFGAGT HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHEEEECCCC LPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA