Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907460

Identifier: 71907460

GI number: 71907460

Start: 1969670

End: 1970371

Strand: Reverse

Name: 71907460

Synonym: Daro_1831

Alternate gene names: NA

Gene position: 1970371-1969670 (Counterclockwise)

Preceding gene: 71907465

Following gene: 71907459

Centisome position: 43.78

GC content: 63.25

Gene sequence:

>702_bases
ATGGACCATAGCCACCACCACGCCATTGCCGAATTTTCGTACTGGCTTGCCTTCATGACCGGCCTGCTCGGTAGCGGACA
TTGCCTGGGCATGTGCGGCGGGCTGGTGTCCGGTTTTTTCATGAAGCTCGGCGCCAAGGGGGTATGGCCCTATCTGGCTT
ATCACGGGGCACGGGTCGGGATTTATACCGTGGTCGGGCTGATTGCCGCTGCGATCGGTGCGGTACTGGTGTCGACTGGC
CAGTTCGGCAAATTACAGGGCGTGCTGCAAATCGTTGCCGGGTTCGTCGTCATCCTGCTCGGCCTGGATCTGCTCGGTGT
TTCCCCCCTCCGCAACCGCCTGGGCTTCGCACCCATCGCCTGGCTGCGCAAGCAGTTCACGCTGGCTGTGCAGAAAGGCC
CGGTCGTTGGCGCACTGATTGGTGGCGCGATCAACGGCCTGATGCCCTGCTCGATGACCATGGCGATGGCCGTCAAGGCC
ACCACCGCACCGTCGGTGCTGGAAGGCGGCCTGCTGATGCTGGCCTTCGGCGCCGGCACCCTGCCCTCGATGCTCTCCGC
CTCCTTCTTGTTCGGCAAGTTGGGGCCGAAGCTGCGCGGCTGGTTGTTGAAAGGTGCCGCGCTGTTCGTCATTGCCCTGG
GCATATCGACGCTCTGGCAGGGGGTCCGCTATTACGCGATCATGCGCAACCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
ATCCGGGCGAGAAATGGCCAAGTCGCATCCAGATCAAGGCGGACCTCCCGGTATTTGCTAGACTGCCCGGACCCGCCTTT
CGACTCTCCCACCGGACTCC

Downstream 100 bases:

>100_bases
GTGCGACACTATGTCGCAGGCCGGGCACATCACTGAGCGCTAATATTTCACGGCCAAAAATAGCGATAGGGAGAACAACA
TGAAACGCCGTGACCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG
QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA
TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG

Sequences:

>Translated_233_residues
MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG
QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA
TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG
>Mature_233_residues
MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVGIYTVVGLIAAAIGAVLVSTG
QFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIAWLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKA
TTAPSVLEGGLLMLAFGAGTLPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24363; Mature: 24363

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH
IYTVVGLIAAAIGAVLVSTGQFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH
WLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKATTAPSVLEGGLLMLAFGAGT
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHEEEECCCC
LPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDHSHHHAIAEFSYWLAFMTGLLGSGHCLGMCGGLVSGFFMKLGAKGVWPYLAYHGARVG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHH
IYTVVGLIAAAIGAVLVSTGQFGKLQGVLQIVAGFVVILLGLDLLGVSPLRNRLGFAPIA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH
WLRKQFTLAVQKGPVVGALIGGAINGLMPCSMTMAMAVKATTAPSVLEGGLLMLAFGAGT
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHEEEECCCC
LPSMLSASFLFGKLGPKLRGWLLKGAALFVIALGISTLWQGVRYYAIMRNLLG
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA