| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907459
Identifier: 71907459
GI number: 71907459
Start: 1968985
End: 1969590
Strand: Reverse
Name: 71907459
Synonym: Daro_1830
Alternate gene names: NA
Gene position: 1969590-1968985 (Counterclockwise)
Preceding gene: 71907460
Following gene: 71907458
Centisome position: 43.76
GC content: 60.73
Gene sequence:
>606_bases ATGAAACGCCGTGACCTGCTCAAGATTTCCGCCCTGGCGGGCATCGCCTCCGTCTCGACCCAAGCCGCAGCCAATACCGC CTGCACCACCGACAGCACGCCGAACCAGTTCATTCCCAAAAAACCAGCCGATGCCAAGCCGCTGGAAAACGAATTCGAGA AATATCCGAAGTGCCCGTATTGCGGCATGGATCGCAAGGAACATCACCGCACCCGGATGCTGGTCCAGTACGCCGATGAC CTGACCGACGGCACCTGCTCCATCCACTGCCTGTCACTCAGCCTTGGCGTCAACATCGATCGCGAACCGAAGAACATCTG GGGGCCCGATTACGGCTCCCCCCTCGAACCGCGCCCGCTGACGCCGGTCGACAGCATGGTTTACCTGATCGGCGCCGACC TCAAGCATGCGATGACCCGGCGCAGCAAGCATTCCTTTGCCTCGCCGAGCACCGCCAAGGAATTTCAGGCCAAGCATGGC GGCACGCTGGGCAACTTCAACGACGCGCTGCGTGAGTCCTACGTCGATATGGCGTCCGATGTCGCCATGATCCGCAAGAT GCGCGAAGAGCGGCGCAAGCGTGCTGCAGAAATGAAGAAGGGCTAA
Upstream 100 bases:
>100_bases ATGCGCAACCTGCTGGGCTGAGTGCGACACTATGTCGCAGGCCGGGCACATCACTGAGCGCTAATATTTCACGGCCAAAA ATAGCGATAGGGAGAACAAC
Downstream 100 bases:
>100_bases TGCAGCGCCGCACGCTTCTCGGTCTCGGGCTGGCGCTCTGCGTCAGCCTTGCCTTTGCCCAAAGCTCGCCCAAACCTGGC GCCAAGGATCTATGCCCGGT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKRRDLLKISALAGIASVSTQAAANTACTTDSTPNQFIPKKPADAKPLENEFEKYPKCPYCGMDRKEHHRTRMLVQYADD LTDGTCSIHCLSLSLGVNIDREPKNIWGPDYGSPLEPRPLTPVDSMVYLIGADLKHAMTRRSKHSFASPSTAKEFQAKHG GTLGNFNDALRESYVDMASDVAMIRKMREERRKRAAEMKKG
Sequences:
>Translated_201_residues MKRRDLLKISALAGIASVSTQAAANTACTTDSTPNQFIPKKPADAKPLENEFEKYPKCPYCGMDRKEHHRTRMLVQYADD LTDGTCSIHCLSLSLGVNIDREPKNIWGPDYGSPLEPRPLTPVDSMVYLIGADLKHAMTRRSKHSFASPSTAKEFQAKHG GTLGNFNDALRESYVDMASDVAMIRKMREERRKRAAEMKKG >Mature_201_residues MKRRDLLKISALAGIASVSTQAAANTACTTDSTPNQFIPKKPADAKPLENEFEKYPKCPYCGMDRKEHHRTRMLVQYADD LTDGTCSIHCLSLSLGVNIDREPKNIWGPDYGSPLEPRPLTPVDSMVYLIGADLKHAMTRRSKHSFASPSTAKEFQAKHG GTLGNFNDALRESYVDMASDVAMIRKMREERRKRAAEMKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22431; Mature: 22431
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDLLKISALAGIASVSTQAAANTACTTDSTPNQFIPKKPADAKPLENEFEKYPKCPY CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC CGMDRKEHHRTRMLVQYADDLTDGTCSIHCLSLSLGVNIDREPKNIWGPDYGSPLEPRPL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC TPVDSMVYLIGADLKHAMTRRSKHSFASPSTAKEFQAKHGGTLGNFNDALRESYVDMASD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VAMIRKMREERRKRAAEMKKG HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRRDLLKISALAGIASVSTQAAANTACTTDSTPNQFIPKKPADAKPLENEFEKYPKCPY CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC CGMDRKEHHRTRMLVQYADDLTDGTCSIHCLSLSLGVNIDREPKNIWGPDYGSPLEPRPL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC TPVDSMVYLIGADLKHAMTRRSKHSFASPSTAKEFQAKHGGTLGNFNDALRESYVDMASD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VAMIRKMREERRKRAAEMKKG HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA