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The map label for this gene is fdhE [H]

Identifier: 71907444

GI number: 71907444

Start: 1950902

End: 1951810

Strand: Reverse

Name: fdhE [H]

Synonym: Daro_1815

Alternate gene names: 71907444

Gene position: 1951810-1950902 (Counterclockwise)

Preceding gene: 71907445

Following gene: 71907443

Centisome position: 43.36

GC content: 63.37

Gene sequence:

>909_bases
ATGCAGACCCAACCGATCGATTTCCATCCGCCGGCCGAAGAGGCTGCACCCTACCTGTTACCGAATCCCGGTTCGATTTT
TGCCGACCGCGCCGCGCGCTTTGCCGCACTGGCTGAAGAACACAGCCTGGGGGACTGGCTCCGCTTTCTTGGCCAACTCA
GCCAGGCCCAGCACGAAATCCTGAAAGGCATACCCACGCTGCCCTTGCCCGACGCGGCCAGCCTCGAACAGGCGCGCACC
CACGGCATGCCACCGCTCAACGCGTCTTCCCTGAGCCGCCCTACAGCCTGGCGCTTTGCGCTGCAGCAACTGGCCCTGCG
CCTTGAAAAAACCGCCCCCGAAGGTGCGAAAAAAGCGCTCAAAGGCTTGTTTTCCGCCAGCGATGCCGATCTGGAAAAAC
TGGCCGACATGCTGCTGACCGGCGAGCCCGATAGCGAATACGCCGCCCAACTGCCCTTCGTCGCGGCCGCCCTGCAAATT
GTCTTCACGGCGCTGGCCAGCCAGCTCGATGCCCAACAGCTTCAACCGCTTGATGCCCATGGCGTCTGCCCCTGCTGCGG
CAGCCTGCCGGTCGCCAGCGTCGTGCGTCTGGGCGCCACGATCAACAACCTGCGCTACCTGCACTGCTCGCTGTGCAATA
CCGAATGGAATGTTCCTCGTGCCACCTGCACCGCCTGCAATACCGACAAGGGCGTGGCCCTGCATGAAGTCGAGGGCAGC
AAGGGTGCCGTCCGCGCCGAAACCTGCGATGCCTGCAAGAGCTACCTGAAAATCGTCTATCAGGAGAAAGACCCGCGCGT
TGATCCGGTCGCCGACGACCTCGCCACACTGGCGCTCGACATGCTGGTCGACGAAGCCGGCTACGAACGCTCCGGCCCCA
ACCTGTTGCTGATCGGCGCCAACGCTTAA

Upstream 100 bases:

>100_bases
GGGCTCTGCGGGGAATATTCCGCATCCCCTTCTTTTTTCAAAAACAACTCGATAGCCCACCGCAAGATGTCGCCAAGGGC
AGAAAAAATCCAATATAAGC

Downstream 100 bases:

>100_bases
CTCCATTGATCAACCTTTCTGCCCGGTCCGGGTGAAAGCCTATGAACGAAAAACGAAATCTACCCGCGGTTGACCGCGTT
CTGGCCCAGCTAGCCGATCT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MQTQPIDFHPPAEEAAPYLLPNPGSIFADRAARFAALAEEHSLGDWLRFLGQLSQAQHEILKGIPTLPLPDAASLEQART
HGMPPLNASSLSRPTAWRFALQQLALRLEKTAPEGAKKALKGLFSASDADLEKLADMLLTGEPDSEYAAQLPFVAAALQI
VFTALASQLDAQQLQPLDAHGVCPCCGSLPVASVVRLGATINNLRYLHCSLCNTEWNVPRATCTACNTDKGVALHEVEGS
KGAVRAETCDACKSYLKIVYQEKDPRVDPVADDLATLALDMLVDEAGYERSGPNLLLIGANA

Sequences:

>Translated_302_residues
MQTQPIDFHPPAEEAAPYLLPNPGSIFADRAARFAALAEEHSLGDWLRFLGQLSQAQHEILKGIPTLPLPDAASLEQART
HGMPPLNASSLSRPTAWRFALQQLALRLEKTAPEGAKKALKGLFSASDADLEKLADMLLTGEPDSEYAAQLPFVAAALQI
VFTALASQLDAQQLQPLDAHGVCPCCGSLPVASVVRLGATINNLRYLHCSLCNTEWNVPRATCTACNTDKGVALHEVEGS
KGAVRAETCDACKSYLKIVYQEKDPRVDPVADDLATLALDMLVDEAGYERSGPNLLLIGANA
>Mature_302_residues
MQTQPIDFHPPAEEAAPYLLPNPGSIFADRAARFAALAEEHSLGDWLRFLGQLSQAQHEILKGIPTLPLPDAASLEQART
HGMPPLNASSLSRPTAWRFALQQLALRLEKTAPEGAKKALKGLFSASDADLEKLADMLLTGEPDSEYAAQLPFVAAALQI
VFTALASQLDAQQLQPLDAHGVCPCCGSLPVASVVRLGATINNLRYLHCSLCNTEWNVPRATCTACNTDKGVALHEVEGS
KGAVRAETCDACKSYLKIVYQEKDPRVDPVADDLATLALDMLVDEAGYERSGPNLLLIGANA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

Organism=Escherichia coli, GI1790324, Length=283, Percent_Identity=36.7491166077738, Blast_Score=191, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 32362; Mature: 32362

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQPIDFHPPAEEAAPYLLPNPGSIFADRAARFAALAEEHSLGDWLRFLGQLSQAQHEI
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LKGIPTLPLPDAASLEQARTHGMPPLNASSLSRPTAWRFALQQLALRLEKTAPEGAKKAL
HHCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
KGLFSASDADLEKLADMLLTGEPDSEYAAQLPFVAAALQIVFTALASQLDAQQLQPLDAH
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVCPCCGSLPVASVVRLGATINNLRYLHCSLCNTEWNVPRATCTACNTDKGVALHEVEGS
CCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHEECCCCCCCCEEEEECCC
KGAVRAETCDACKSYLKIVYQEKDPRVDPVADDLATLALDMLVDEAGYERSGPNLLLIGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
NA
CC
>Mature Secondary Structure
MQTQPIDFHPPAEEAAPYLLPNPGSIFADRAARFAALAEEHSLGDWLRFLGQLSQAQHEI
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LKGIPTLPLPDAASLEQARTHGMPPLNASSLSRPTAWRFALQQLALRLEKTAPEGAKKAL
HHCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
KGLFSASDADLEKLADMLLTGEPDSEYAAQLPFVAAALQIVFTALASQLDAQQLQPLDAH
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVCPCCGSLPVASVVRLGATINNLRYLHCSLCNTEWNVPRATCTACNTDKGVALHEVEGS
CCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHEECCCCCCCCEEEEECCC
KGAVRAETCDACKSYLKIVYQEKDPRVDPVADDLATLALDMLVDEAGYERSGPNLLLIGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
NA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]