| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907405
Identifier: 71907405
GI number: 71907405
Start: 1913538
End: 1914455
Strand: Reverse
Name: 71907405
Synonym: Daro_1775
Alternate gene names: NA
Gene position: 1914455-1913538 (Counterclockwise)
Preceding gene: 71907406
Following gene: 71907402
Centisome position: 42.53
GC content: 50.11
Gene sequence:
>918_bases ATGAAACCGAACACAATTTTGACAGTTTTGGCAATTGCCACCACCTTCGGATCAATGCCTGCTGATGCCGCGAGTTGCAC ATTTAGCAACACCGTCGCAATAACCGGGATTAATCTTGTAAATCCAGATGGATCAGCTGGTGCGGCTTTGGCAATTCCCG ATTTGACCCCCACGGCTTGCATCGTCGCGGATGGCAACATCAGTGGAAATTACCCGGTAGGTTCCAACATCGGCATCTTG GGTGAGGGTGTCCTGAATGGCGGGGCGGGCAACGGCGCTAACACCCAGATTTTTGACCCTTATTTCTTGCCCCCCTCAAA CCCAAGTACTGGCATTGTTCTGAATGACCAATACTTGCCGTCTCCATTAACGTACCCAACCGAGAAACTCGTGAATAACG TGGACCCTGGCTGGATCAAGTTGTATTCCACCGACGGCGGATATGGCGCAAATCCAACGCTGGGTAATCTATCGCTGGTC ATTAGTCAGTTAATGACAATTAACGTGACCGGAGGTAATGGCACAAGCGGGACTTGGAGTCTCAATTTGGATCCACAAAT CATCACCCAAGTCCAGAGTGTATTGGGTCGAAATGCCTTTGATCATTTGGCCTTTGTTCTAAAGTCAAGCACTGAATCCA TTGTCTATGACTTTGACTTTAACGTATATGCCCAATACTTTGCCTATCTAGGTCAGAATATTCCTTTCGACTATGTGACG CCCTACGACTTCTCGGGCACTTGGAAGATGACGGACTTCACCAACCGAAATGGCAATACGCAGGGCTTATCTCACATGGA AATTTGGGCACGCGACCCGGATGCAACTCAGAACATTCCCGAACCCGCCAGCCTGGCCCTTCTCGGCCTCGGTCTTGCCG GTCTCGGCCTGAGCCGTCGCAAGAACAAGCAACAGTAA
Upstream 100 bases:
>100_bases AGAAAATAAATACAACGAATTGATTAAACGAGAATTTATATTTTCGGCACCAATATTGCTTATACACAATCATGTTAATA ATCGTAATATGGTGACAAAG
Downstream 100 bases:
>100_bases TAACTCATTGCTCAGACAAAGGGTCGGCTAGTCCGACCTTTTTTTGTGCAGAGAAAAACTCTCCGCCGGACCGCTTACAG CCGCTTCGCCAATCGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ
Sequences:
>Translated_305_residues MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ >Mature_305_residues MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32253; Mature: 32253
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTAC CCCCCEEHHHHHHHHHCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCEEEECCCCCCEE IVADGNISGNYPVGSNIGILGEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLP EEECCCCCCCCCCCCCCCEEECCEECCCCCCCCCCEEECCEECCCCCCCCEEEECCCCCC SPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLVISQLMTINVTGGNGTSGTWS CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEE LNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT EECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRR CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC KNKQQ CCCCC >Mature Secondary Structure MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTAC CCCCCEEHHHHHHHHHCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCEEEECCCCCCEE IVADGNISGNYPVGSNIGILGEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLP EEECCCCCCCCCCCCCCCEEECCEECCCCCCCCCCEEECCEECCCCCCCCEEEECCCCCC SPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLVISQLMTINVTGGNGTSGTWS CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEE LNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT EECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRR CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC KNKQQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA