Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907405

Identifier: 71907405

GI number: 71907405

Start: 1913538

End: 1914455

Strand: Reverse

Name: 71907405

Synonym: Daro_1775

Alternate gene names: NA

Gene position: 1914455-1913538 (Counterclockwise)

Preceding gene: 71907406

Following gene: 71907402

Centisome position: 42.53

GC content: 50.11

Gene sequence:

>918_bases
ATGAAACCGAACACAATTTTGACAGTTTTGGCAATTGCCACCACCTTCGGATCAATGCCTGCTGATGCCGCGAGTTGCAC
ATTTAGCAACACCGTCGCAATAACCGGGATTAATCTTGTAAATCCAGATGGATCAGCTGGTGCGGCTTTGGCAATTCCCG
ATTTGACCCCCACGGCTTGCATCGTCGCGGATGGCAACATCAGTGGAAATTACCCGGTAGGTTCCAACATCGGCATCTTG
GGTGAGGGTGTCCTGAATGGCGGGGCGGGCAACGGCGCTAACACCCAGATTTTTGACCCTTATTTCTTGCCCCCCTCAAA
CCCAAGTACTGGCATTGTTCTGAATGACCAATACTTGCCGTCTCCATTAACGTACCCAACCGAGAAACTCGTGAATAACG
TGGACCCTGGCTGGATCAAGTTGTATTCCACCGACGGCGGATATGGCGCAAATCCAACGCTGGGTAATCTATCGCTGGTC
ATTAGTCAGTTAATGACAATTAACGTGACCGGAGGTAATGGCACAAGCGGGACTTGGAGTCTCAATTTGGATCCACAAAT
CATCACCCAAGTCCAGAGTGTATTGGGTCGAAATGCCTTTGATCATTTGGCCTTTGTTCTAAAGTCAAGCACTGAATCCA
TTGTCTATGACTTTGACTTTAACGTATATGCCCAATACTTTGCCTATCTAGGTCAGAATATTCCTTTCGACTATGTGACG
CCCTACGACTTCTCGGGCACTTGGAAGATGACGGACTTCACCAACCGAAATGGCAATACGCAGGGCTTATCTCACATGGA
AATTTGGGCACGCGACCCGGATGCAACTCAGAACATTCCCGAACCCGCCAGCCTGGCCCTTCTCGGCCTCGGTCTTGCCG
GTCTCGGCCTGAGCCGTCGCAAGAACAAGCAACAGTAA

Upstream 100 bases:

>100_bases
AGAAAATAAATACAACGAATTGATTAAACGAGAATTTATATTTTCGGCACCAATATTGCTTATACACAATCATGTTAATA
ATCGTAATATGGTGACAAAG

Downstream 100 bases:

>100_bases
TAACTCATTGCTCAGACAAAGGGTCGGCTAGTCCGACCTTTTTTTGTGCAGAGAAAAACTCTCCGCCGGACCGCTTACAG
CCGCTTCGCCAATCGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL
GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV
ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT
PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ

Sequences:

>Translated_305_residues
MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL
GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV
ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT
PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ
>Mature_305_residues
MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTACIVADGNISGNYPVGSNIGIL
GEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLPSPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLV
ISQLMTINVTGGNGTSGTWSLNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT
PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRRKNKQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32253; Mature: 32253

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTAC
CCCCCEEHHHHHHHHHCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCEEEECCCCCCEE
IVADGNISGNYPVGSNIGILGEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLP
EEECCCCCCCCCCCCCCCEEECCEECCCCCCCCCCEEECCEECCCCCCCCEEEECCCCCC
SPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLVISQLMTINVTGGNGTSGTWS
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEE
LNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT
EECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC
PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRR
CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
KNKQQ
CCCCC
>Mature Secondary Structure
MKPNTILTVLAIATTFGSMPADAASCTFSNTVAITGINLVNPDGSAGAALAIPDLTPTAC
CCCCCEEHHHHHHHHHCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCEEEECCCCCCEE
IVADGNISGNYPVGSNIGILGEGVLNGGAGNGANTQIFDPYFLPPSNPSTGIVLNDQYLP
EEECCCCCCCCCCCCCCCEEECCEECCCCCCCCCCEEECCEECCCCCCCCEEEECCCCCC
SPLTYPTEKLVNNVDPGWIKLYSTDGGYGANPTLGNLSLVISQLMTINVTGGNGTSGTWS
CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEE
LNLDPQIITQVQSVLGRNAFDHLAFVLKSSTESIVYDFDFNVYAQYFAYLGQNIPFDYVT
EECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCC
PYDFSGTWKMTDFTNRNGNTQGLSHMEIWARDPDATQNIPEPASLALLGLGLAGLGLSRR
CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
KNKQQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA