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The map label for this gene is lutB [H]

Identifier: 71907394

GI number: 71907394

Start: 1897857

End: 1899299

Strand: Reverse

Name: lutB [H]

Synonym: Daro_1764

Alternate gene names: 71907394

Gene position: 1899299-1897857 (Counterclockwise)

Preceding gene: 71907395

Following gene: 71907393

Centisome position: 42.2

GC content: 62.65

Gene sequence:

>1443_bases
ATGACCACCCCGCAGACCCCACACACGCTTCATTTCATGCCGTCCGCCGGCTTCCGCGCCCGGGCCAAGGATGTGGTCGA
GAATCCCTTCCTGCGCCAGAGCTTCCGGGGGGCGATGGACTTCCTGATGAGCAAGCGCGCCGCCCAGTTTCCCGATCAGG
AAGAACTGGAAAGCCTGCGCAGCCTGGGGGAACGCATCCGCCAGTACAACCTGGCCAAGCTGCCGACCCTGCTCGAACAA
CTCGAAGCCAAGCTCACTGCCAACGGCATCCAGGTCCATTGGGCCGAAACCCCGGACGAAGCCAACGCCATCATCCTCGG
CATCTGCCAGAAGCACTCGGCCAAGTTGATGGTCAAGGGCAAGTCGATGGTCAGCGAGGAAATCGAACTGAACCACGCGG
CGGAAGCGGCCGGCATCGGCGCGCTGGAATCGGACATGGGCGAATACATCGTCCAGCTGGCCCATGAAAAGCCGTCGCAC
ATCATCATGCCGGCCATCCACAAGACCAAGCAGGAAATCGCCCAACTCTTCGCCGACAACGTGCCGGGGGTCGATTACAC
CGACAATGTCGATGCGCTGATCCAGATCGGCCGCAACGTGCTGCGCCAGAAATTCCAGGAAGCCGACATCGGCCTCTCCG
GCGTCAATTTCGCAGTCGCCGAAACCGGTACGCTGTGTCTGGTCGAGAACGAAGGCAATGGCCGGATGTGCACCACGGCG
CCGCCGGTGCATATCGCCATCACCGGCATCGAGAAGATCGTCGAAAAACTGGAACACGTGCCGCCGCTGCTCTCGCTGCT
CACCCGCTCGGCGACCGGCCAGAACATTTCGACCTATTTCAACATGATTTCCAGCCCGCGCAAGGCCGGAGAGAAAGATG
GTCCGAGCGAAGTGCACCTCGTGCTGCTCGACAACGGCCGCAGCCAGGCCTATGCCGACGAACAGTTGCGCAAGACGCTG
CAATGCATTCGCTGCGGCGCCTGCATGAACCACTGCCCGGTCTACACCCGCATCGGCGGCCACGCCTACGGCACGACCTA
CCCCGGCCCGATCGGCAAGATCATCTCGCCGCACATGCTCGGGCTGGAGGCGACGGCCACGATGGCCACCGCTTCATCGC
TGTGCGGTGCCTGTGGCGAGGTCTGTCCGGTCAAGATCCCGATTCCCGAACTGCTGATGCGTTTGCGTGAGGAATCCTTC
TCCAAACCGCACGCCAATCCCGCCATGCGCGGTCAGGGTGCCGGCTACAAGCCTCTGATTTCGGCGATCTGGCGCGGCTG
GTCGACGGTTTATGCCAGCCCGGCCCTTTATCGCCTTGTCTCCTGGCTGGGCAGCCGCTTCAACTGGCTAACGCCCAGCA
AGCAAGGCGCCTGGACGACCGTCCGCACGCCATTGAAACCGGCCCCGAAACGCCTGCGCGATCTGCTGAAGGACAAGGCA
TGA

Upstream 100 bases:

>100_bases
TCATTTCCGGCCCTTCAAAAACCGCCGACATCCAGCAAACGCTGGCCTACGGCGCCCATGGTCCGAAGGAACTGGTCGTC
CTGCTCATCGGAGACGAACA

Downstream 100 bases:

>100_bases
GCATGATTATCGACGCTCTGAAGAAAACACTACCCGCCAGCCAGGTCATCACTGACGAGCTGCGTCGCCTGGCTTACGGC
ACCGACGCCAGCTTCTACCG

Product: Iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTTPQTPHTLHFMPSAGFRARAKDVVENPFLRQSFRGAMDFLMSKRAAQFPDQEELESLRSLGERIRQYNLAKLPTLLEQ
LEAKLTANGIQVHWAETPDEANAIILGICQKHSAKLMVKGKSMVSEEIELNHAAEAAGIGALESDMGEYIVQLAHEKPSH
IIMPAIHKTKQEIAQLFADNVPGVDYTDNVDALIQIGRNVLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTA
PPVHIAITGIEKIVEKLEHVPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHLVLLDNGRSQAYADEQLRKTL
QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHMLGLEATATMATASSLCGACGEVCPVKIPIPELLMRLREESF
SKPHANPAMRGQGAGYKPLISAIWRGWSTVYASPALYRLVSWLGSRFNWLTPSKQGAWTTVRTPLKPAPKRLRDLLKDKA

Sequences:

>Translated_480_residues
MTTPQTPHTLHFMPSAGFRARAKDVVENPFLRQSFRGAMDFLMSKRAAQFPDQEELESLRSLGERIRQYNLAKLPTLLEQ
LEAKLTANGIQVHWAETPDEANAIILGICQKHSAKLMVKGKSMVSEEIELNHAAEAAGIGALESDMGEYIVQLAHEKPSH
IIMPAIHKTKQEIAQLFADNVPGVDYTDNVDALIQIGRNVLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTA
PPVHIAITGIEKIVEKLEHVPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHLVLLDNGRSQAYADEQLRKTL
QCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHMLGLEATATMATASSLCGACGEVCPVKIPIPELLMRLREESF
SKPHANPAMRGQGAGYKPLISAIWRGWSTVYASPALYRLVSWLGSRFNWLTPSKQGAWTTVRTPLKPAPKRLRDLLKDKA
>Mature_479_residues
TTPQTPHTLHFMPSAGFRARAKDVVENPFLRQSFRGAMDFLMSKRAAQFPDQEELESLRSLGERIRQYNLAKLPTLLEQL
EAKLTANGIQVHWAETPDEANAIILGICQKHSAKLMVKGKSMVSEEIELNHAAEAAGIGALESDMGEYIVQLAHEKPSHI
IMPAIHKTKQEIAQLFADNVPGVDYTDNVDALIQIGRNVLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTAP
PVHIAITGIEKIVEKLEHVPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHLVLLDNGRSQAYADEQLRKTLQ
CIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHMLGLEATATMATASSLCGACGEVCPVKIPIPELLMRLREESFS
KPHANPAMRGQGAGYKPLISAIWRGWSTVYASPALYRLVSWLGSRFNWLTPSKQGAWTTVRTPLKPAPKRLRDLLKDKA

Specific function: Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. May also allow cells to utilize an alternative carbon source during biofi

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=379, Percent_Identity=43.7994722955145, Blast_Score=347, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52646; Mature: 52515

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPQTPHTLHFMPSAGFRARAKDVVENPFLRQSFRGAMDFLMSKRAAQFPDQEELESLR
CCCCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SLGERIRQYNLAKLPTLLEQLEAKLTANGIQVHWAETPDEANAIILGICQKHSAKLMVKG
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEC
KSMVSEEIELNHAAEAAGIGALESDMGEYIVQLAHEKPSHIIMPAIHKTKQEIAQLFADN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
VPGVDYTDNVDALIQIGRNVLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCEEEECC
PPVHIAITGIEKIVEKLEHVPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHL
CCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCCEEE
VLLDNGRSQAYADEQLRKTLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHML
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHC
GLEATATMATASSLCGACGEVCPVKIPIPELLMRLREESFSKPHANPAMRGQGAGYKPLI
CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
SAIWRGWSTVYASPALYRLVSWLGSRFNWLTPSKQGAWTTVRTPLKPAPKRLRDLLKDKA
HHHHCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TTPQTPHTLHFMPSAGFRARAKDVVENPFLRQSFRGAMDFLMSKRAAQFPDQEELESLR
CCCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SLGERIRQYNLAKLPTLLEQLEAKLTANGIQVHWAETPDEANAIILGICQKHSAKLMVKG
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEC
KSMVSEEIELNHAAEAAGIGALESDMGEYIVQLAHEKPSHIIMPAIHKTKQEIAQLFADN
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
VPGVDYTDNVDALIQIGRNVLRQKFQEADIGLSGVNFAVAETGTLCLVENEGNGRMCTTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCEEEECC
PPVHIAITGIEKIVEKLEHVPPLLSLLTRSATGQNISTYFNMISSPRKAGEKDGPSEVHL
CCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCCEEE
VLLDNGRSQAYADEQLRKTLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGKIISPHML
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCCHHC
GLEATATMATASSLCGACGEVCPVKIPIPELLMRLREESFSKPHANPAMRGQGAGYKPLI
CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
SAIWRGWSTVYASPALYRLVSWLGSRFNWLTPSKQGAWTTVRTPLKPAPKRLRDLLKDKA
HHHHCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]