| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ykgG [C]
Identifier: 71907395
GI number: 71907395
Start: 1899296
End: 1899964
Strand: Reverse
Name: ykgG [C]
Synonym: Daro_1765
Alternate gene names: 71907395
Gene position: 1899964-1899296 (Counterclockwise)
Preceding gene: 71907396
Following gene: 71907394
Centisome position: 42.21
GC content: 61.88
Gene sequence:
>669_bases ATGAGCGCCCGTGATCGCATCCTGGCCAAATTGAAGGCCAATTCGCCGGCGACCGCAGGCGAGCTGCCCGATGTTGCCGG CTGGTACACCACGCATCGCAGCACCGAAAGCCCGGCCGACAAGGCCAAGCGTTTCCGCCACTTCATCGAACTCGCCCACG CCGAGGTTTATGCCGCCTCGCGCGGTGGCTGGCTGCAAAAGCTTTATGAAGTCCTGAGCGCCAAGCAGATCGACAAGCTG CTGGTCGCCCCCGGCACACCGCACGGTGCACGGGCCCAAAGCGACTTGCCACCACTCGGCATCGCTTGCCCAGGCTACGA AACGGCCATCGAAAACTGGAAGCCGGCGATGTTCAATGAAACACCAGCCAGCTTTACGGCTGCCCGGGCGGCCATCGCCG AAACCGGCACGCTGATCCTGTGGCCCACCGCCGACGAGCCACGCCTGATGTCGTTGGTGCCGCCGGTCCATATCGTCCTG CTCGACGCCAATACGATCTACAACACCTTCCATGAAGCCATGCTGAGCGAAGGCTGGAAAGACGGCCTGCCAACCAATTC CCTTCTCATTTCCGGCCCTTCAAAAACCGCCGACATCCAGCAAACGCTGGCCTACGGCGCCCATGGTCCGAAGGAACTGG TCGTCCTGCTCATCGGAGACGAACAATGA
Upstream 100 bases:
>100_bases TTCTCGGCCACGCCGCCTGGAAAGACGAACAGGAAGGCCGCAAGACACCGAGCCTGCCAGGCGAACACATCGCCACTTTC CTGCTGCGGAGGACTGCCCA
Downstream 100 bases:
>100_bases CCACCCCGCAGACCCCACACACGCTTCATTTCATGCCGTCCGCCGGCTTCCGCGCCCGGGCCAAGGATGTGGTCGAGAAT CCCTTCCTGCGCCAGAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSARDRILAKLKANSPATAGELPDVAGWYTTHRSTESPADKAKRFRHFIELAHAEVYAASRGGWLQKLYEVLSAKQIDKL LVAPGTPHGARAQSDLPPLGIACPGYETAIENWKPAMFNETPASFTAARAAIAETGTLILWPTADEPRLMSLVPPVHIVL LDANTIYNTFHEAMLSEGWKDGLPTNSLLISGPSKTADIQQTLAYGAHGPKELVVLLIGDEQ
Sequences:
>Translated_222_residues MSARDRILAKLKANSPATAGELPDVAGWYTTHRSTESPADKAKRFRHFIELAHAEVYAASRGGWLQKLYEVLSAKQIDKL LVAPGTPHGARAQSDLPPLGIACPGYETAIENWKPAMFNETPASFTAARAAIAETGTLILWPTADEPRLMSLVPPVHIVL LDANTIYNTFHEAMLSEGWKDGLPTNSLLISGPSKTADIQQTLAYGAHGPKELVVLLIGDEQ >Mature_221_residues SARDRILAKLKANSPATAGELPDVAGWYTTHRSTESPADKAKRFRHFIELAHAEVYAASRGGWLQKLYEVLSAKQIDKLL VAPGTPHGARAQSDLPPLGIACPGYETAIENWKPAMFNETPASFTAARAAIAETGTLILWPTADEPRLMSLVPPVHIVLL DANTIYNTFHEAMLSEGWKDGLPTNSLLISGPSKTADIQQTLAYGAHGPKELVVLLIGDEQ
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 24019; Mature: 23887
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARDRILAKLKANSPATAGELPDVAGWYTTHRSTESPADKAKRFRHFIELAHAEVYAAS CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RGGWLQKLYEVLSAKQIDKLLVAPGTPHGARAQSDLPPLGIACPGYETAIENWKPAMFNE CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCC TPASFTAARAAIAETGTLILWPTADEPRLMSLVPPVHIVLLDANTIYNTFHEAMLSEGWK CCCHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHCCCC DGLPTNSLLISGPSKTADIQQTLAYGAHGPKELVVLLIGDEQ CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCC >Mature Secondary Structure SARDRILAKLKANSPATAGELPDVAGWYTTHRSTESPADKAKRFRHFIELAHAEVYAAS CHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RGGWLQKLYEVLSAKQIDKLLVAPGTPHGARAQSDLPPLGIACPGYETAIENWKPAMFNE CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCC TPASFTAARAAIAETGTLILWPTADEPRLMSLVPPVHIVLLDANTIYNTFHEAMLSEGWK CCCHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHCCCC DGLPTNSLLISGPSKTADIQQTLAYGAHGPKELVVLLIGDEQ CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]