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The map label for this gene is cycA [H]

Identifier: 71907201

GI number: 71907201

Start: 1682098

End: 1682823

Strand: Reverse

Name: cycA [H]

Synonym: Daro_1569

Alternate gene names: 71907201

Gene position: 1682823-1682098 (Counterclockwise)

Preceding gene: 71907202

Following gene: 71907200

Centisome position: 37.39

GC content: 56.34

Gene sequence:

>726_bases
ATGAAAGCATCACTTCTGCTGATCGGTCTGCTCAGCGCAGGCGTCGCCTTCGCCGGCCCACCGGCACCACACAAGGAAGG
CATCGAGAGCAAGGACTACAAGTGGAACGCCGAAGGTGGCGAAAAGATGGAAGCCCTGCACAAGAAGGGTAACGTCAAGA
ATGGCGAGGAAGTCTATGAGATTTGCGGCGCCTGCCACCTGCCCTCCGGCGCAGGCCGAGCTGATGGCACCTTCCCGCAA
CTGGCTGGTCAACATTCTACGGTGCTGATCAAGCAGATGGCCGACATCCGCTCCGGCGAGCGCGACAATCCGACCATGTA
TCCGTTTGCCTCCACCCTGACCGATCCACAGGAACTGGCTGATGCAGCCGCTTACATCAACAGCCTGTGCATTCCACTCG
AGCATGGCAAGTATGAAGGTGCTGATGCAGCCATGCAGATCGCCAAGGGCAAGGAATTGTATGAAAAGGAATGCCTGGAA
TGCCACGGCAAGACCGGCGAAGGTAACAAGGAAAAGTTCTACCCGGTAATCGCCGGCCAGCACTACAAGTACCTGTTGCG
TCAGATGACTGAAATCCGTGATGGCAAGCGCCGCAACGCCAATCCGGACATGGTCAAGATCATCAAGAAGTACGATAACC
AGCAGTTGATCGCCATCTCCGCCTACCAGTCGAGCATGGTGATGCCGGGTGCGATGTGCAAGCCGAAGGCCGGAAAAAAG
AAGTAA

Upstream 100 bases:

>100_bases
CGTATTTACGGGCTTATGACCCACATCAAGGAACGCTGATATAGGTCGTTTGAGAATACGTTCAGCGTTCCGAACAACTT
GCCACATAAGGAAACCAAAC

Downstream 100 bases:

>100_bases
TCTGAAGTAGGCTGAAAAGGTTGCCTGCAATCGCAGGCAACCACATCCCCGACGCCAAGCCGGGGCAATTGATGACAGAG
AACAGCAAAATGGAAAAACA

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKASLLLIGLLSAGVAFAGPPAPHKEGIESKDYKWNAEGGEKMEALHKKGNVKNGEEVYEICGACHLPSGAGRADGTFPQ
LAGQHSTVLIKQMADIRSGERDNPTMYPFASTLTDPQELADAAAYINSLCIPLEHGKYEGADAAMQIAKGKELYEKECLE
CHGKTGEGNKEKFYPVIAGQHYKYLLRQMTEIRDGKRRNANPDMVKIIKKYDNQQLIAISAYQSSMVMPGAMCKPKAGKK
K

Sequences:

>Translated_241_residues
MKASLLLIGLLSAGVAFAGPPAPHKEGIESKDYKWNAEGGEKMEALHKKGNVKNGEEVYEICGACHLPSGAGRADGTFPQ
LAGQHSTVLIKQMADIRSGERDNPTMYPFASTLTDPQELADAAAYINSLCIPLEHGKYEGADAAMQIAKGKELYEKECLE
CHGKTGEGNKEKFYPVIAGQHYKYLLRQMTEIRDGKRRNANPDMVKIIKKYDNQQLIAISAYQSSMVMPGAMCKPKAGKK
K
>Mature_241_residues
MKASLLLIGLLSAGVAFAGPPAPHKEGIESKDYKWNAEGGEKMEALHKKGNVKNGEEVYEICGACHLPSGAGRADGTFPQ
LAGQHSTVLIKQMADIRSGERDNPTMYPFASTLTDPQELADAAAYINSLCIPLEHGKYEGADAAMQIAKGKELYEKECLE
CHGKTGEGNKEKFYPVIAGQHYKYLLRQMTEIRDGKRRNANPDMVKIIKKYDNQQLIAISAYQSSMVMPGAMCKPKAGKK
K

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 26349; Mature: 26349

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLLLIGLLSAGVAFAGPPAPHKEGIESKDYKWNAEGGEKMEALHKKGNVKNGEEVYE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHH
ICGACHLPSGAGRADGTFPQLAGQHSTVLIKQMADIRSGERDNPTMYPFASTLTDPQELA
HHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHCCCHHHHH
DAAAYINSLCIPLEHGKYEGADAAMQIAKGKELYEKECLECHGKTGEGNKEKFYPVIAGQ
HHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
HYKYLLRQMTEIRDGKRRNANPDMVKIIKKYDNQQLIAISAYQSSMVMPGAMCKPKAGKK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure
MKASLLLIGLLSAGVAFAGPPAPHKEGIESKDYKWNAEGGEKMEALHKKGNVKNGEEVYE
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHH
ICGACHLPSGAGRADGTFPQLAGQHSTVLIKQMADIRSGERDNPTMYPFASTLTDPQELA
HHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHCCCHHHHH
DAAAYINSLCIPLEHGKYEGADAAMQIAKGKELYEKECLECHGKTGEGNKEKFYPVIAGQ
HHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
HYKYLLRQMTEIRDGKRRNANPDMVKIIKKYDNQQLIAISAYQSSMVMPGAMCKPKAGKK
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7619830; 6089759 [H]