| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907200
Identifier: 71907200
GI number: 71907200
Start: 1681034
End: 1682026
Strand: Reverse
Name: 71907200
Synonym: Daro_1568
Alternate gene names: NA
Gene position: 1682026-1681034 (Counterclockwise)
Preceding gene: 71907201
Following gene: 71907199
Centisome position: 37.37
GC content: 52.87
Gene sequence:
>993_bases ATGACAGAGAACAGCAAAATGGAAAAACAAAATAAAATTATCGGTGGCTTGACCCTGATTTCCCTGATCTGCCTGGTCGC CGCTTATTTCGCCCCGATCTGGTGGGTTTCGCTGACCGCCCCCAATTATCCCCCCGATGCCTTCCCTGATGGTATCCGCA TCCATTTCCATTTCGATGGCGTCTATAACGGCTGCAAAGCGGCCGGCAAAGGTAGCCGTATGGCTAGCGAGATCATCCAA AAGGATCTGGAGGATACCGACGAGCGCTACAACCCGATTACCGACGCAGCAAAAAATGTAGACAAAGGCGCTGAAGGGCT CGATTGCGTTCATGAGATGAACACCATCAACCACTATGTCGGCATGTTCCCGATCGCTACTGGTGCCCCCGTCGAAAAAC CGCTGGCCAAATTCTTCTTCGGCTTCTTCGCCGTCATGATGCTGGCCTTCACCATGGCCAAGAAAAAACCGCGTTTATTG ATTTTGACCGCTGGTTTCGCTGCTGTCGCCGCCTGGATGATTGTTGATCAATTCGTACTGGGCCATCTGGAAAGCCACGT TCAGGCGTACATGCAGGAATCCGGCACCTTCTTCAAGGATATGGAGCGAATCAGCGCCTGGGGCGACAACGTCCGCAACG TCTCGAAAATTGTCATCTTCGGCCTGATTGCGGTCATGGGAATCGTTATTGCAGGGACGGCCAAAATTCGCTCCTTCCAA CTACTGCTCGCACTGGTACCGGCCCTGTTGCCTGTCTTCTTTGTAATCACCTATGCTGGTTGGTTGTGGTTCTTTGGCCA CAACATGCACCCATGGGGCGCCTTTACCGTCAAGCCCTTCATGCCTACCGTATTCGGCGAAGGCAAAGTGGCCCAGTTCT CAACCTTCTCTTATCCCTACTGGGGCTATGGCCTGCTGGTGGCAATATTTGCTTGTATGATGCTAGCCCTGCTGATGCGC CGCAAACAACTGCGCGAAGGCACTGCTGAGTAA
Upstream 100 bases:
>100_bases GCAAGCCGAAGGCCGGAAAAAAGAAGTAATCTGAAGTAGGCTGAAAAGGTTGCCTGCAATCGCAGGCAACCACATCCCCG ACGCCAAGCCGGGGCAATTG
Downstream 100 bases:
>100_bases TCAGTGTGAGTTCCCTGCACAATCTGGCCAGGCTCGGCCTGGCCACCGCACTCCTACTGGTTCTGAGCACTGGCAACACT GAACAGCAATCTGAACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTENSKMEKQNKIIGGLTLISLICLVAAYFAPIWWVSLTAPNYPPDAFPDGIRIHFHFDGVYNGCKAAGKGSRMASEIIQ KDLEDTDERYNPITDAAKNVDKGAEGLDCVHEMNTINHYVGMFPIATGAPVEKPLAKFFFGFFAVMMLAFTMAKKKPRLL ILTAGFAAVAAWMIVDQFVLGHLESHVQAYMQESGTFFKDMERISAWGDNVRNVSKIVIFGLIAVMGIVIAGTAKIRSFQ LLLALVPALLPVFFVITYAGWLWFFGHNMHPWGAFTVKPFMPTVFGEGKVAQFSTFSYPYWGYGLLVAIFACMMLALLMR RKQLREGTAE
Sequences:
>Translated_330_residues MTENSKMEKQNKIIGGLTLISLICLVAAYFAPIWWVSLTAPNYPPDAFPDGIRIHFHFDGVYNGCKAAGKGSRMASEIIQ KDLEDTDERYNPITDAAKNVDKGAEGLDCVHEMNTINHYVGMFPIATGAPVEKPLAKFFFGFFAVMMLAFTMAKKKPRLL ILTAGFAAVAAWMIVDQFVLGHLESHVQAYMQESGTFFKDMERISAWGDNVRNVSKIVIFGLIAVMGIVIAGTAKIRSFQ LLLALVPALLPVFFVITYAGWLWFFGHNMHPWGAFTVKPFMPTVFGEGKVAQFSTFSYPYWGYGLLVAIFACMMLALLMR RKQLREGTAE >Mature_329_residues TENSKMEKQNKIIGGLTLISLICLVAAYFAPIWWVSLTAPNYPPDAFPDGIRIHFHFDGVYNGCKAAGKGSRMASEIIQK DLEDTDERYNPITDAAKNVDKGAEGLDCVHEMNTINHYVGMFPIATGAPVEKPLAKFFFGFFAVMMLAFTMAKKKPRLLI LTAGFAAVAAWMIVDQFVLGHLESHVQAYMQESGTFFKDMERISAWGDNVRNVSKIVIFGLIAVMGIVIAGTAKIRSFQL LLALVPALLPVFFVITYAGWLWFFGHNMHPWGAFTVKPFMPTVFGEGKVAQFSTFSYPYWGYGLLVAIFACMMLALLMRR KQLREGTAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36786; Mature: 36655
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENSKMEKQNKIIGGLTLISLICLVAAYFAPIWWVSLTAPNYPPDAFPDGIRIHFHFDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECC VYNGCKAAGKGSRMASEIIQKDLEDTDERYNPITDAAKNVDKGAEGLDCVHEMNTINHYV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH GMFPIATGAPVEKPLAKFFFGFFAVMMLAFTMAKKKPRLLILTAGFAAVAAWMIVDQFVL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH GHLESHVQAYMQESGTFFKDMERISAWGDNVRNVSKIVIFGLIAVMGIVIAGTAKIRSFQ HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LLLALVPALLPVFFVITYAGWLWFFGHNMHPWGAFTVKPFMPTVFGEGKVAQFSTFSYPY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHCCCCCEEEEECCCCCH WGYGLLVAIFACMMLALLMRRKQLREGTAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TENSKMEKQNKIIGGLTLISLICLVAAYFAPIWWVSLTAPNYPPDAFPDGIRIHFHFDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECC VYNGCKAAGKGSRMASEIIQKDLEDTDERYNPITDAAKNVDKGAEGLDCVHEMNTINHYV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH GMFPIATGAPVEKPLAKFFFGFFAVMMLAFTMAKKKPRLLILTAGFAAVAAWMIVDQFVL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH GHLESHVQAYMQESGTFFKDMERISAWGDNVRNVSKIVIFGLIAVMGIVIAGTAKIRSFQ HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LLLALVPALLPVFFVITYAGWLWFFGHNMHPWGAFTVKPFMPTVFGEGKVAQFSTFSYPY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHCCCCCEEEEECCCCCH WGYGLLVAIFACMMLALLMRRKQLREGTAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA