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The map label for this gene is fdxC [H]

Identifier: 71907082

GI number: 71907082

Start: 1578987

End: 1579274

Strand: Reverse

Name: fdxC [H]

Synonym: Daro_1450

Alternate gene names: 71907082

Gene position: 1579274-1578987 (Counterclockwise)

Preceding gene: 71907083

Following gene: 71907081

Centisome position: 35.09

GC content: 63.54

Gene sequence:

>288_bases
ATGCCAAAAGCCAAAGTCACCTTTCAGGATATCGGCGTCTCGGTCACCGTGCCAGCCGGCACCCGCCTCATTGAAGTCTC
CGAAAAAGTCGGCGCCGGGATCACCTACGGCTGCCGTGAAGGCGAGTGCTGCACCTGCCTGACCAAGATCGTTTCGGGCG
GCGAGAACCTCGCCACGCCAAGCATTCTGGAAGACCAGGTCCTCAAGGACAACCTGGCCCCGCGCGGCCACCGGCTGGCC
TGCCAGGCGCAGATTCTCGGCGGCGAACTGGTCGTCAAGCCAGCCTGA

Upstream 100 bases:

>100_bases
TGCCGCCTTCTCGGCGAAAACCTGGCCCGTCACCTGACCGGCCGGATCGAACACCGCGAGATCGACATGGCGGCTCTTGC
GTAGATAAAGGGAGAAAACA

Downstream 100 bases:

>100_bases
ACGCTACCGCGACAGAACAAGATTAAAAGCAATCACCCAACCCCAACAGAGAAATTCAAACAACCCGCTTTCCGGAGAAA
CAAGAAATGGCCCTCATTAC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin IV; FdIV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPKAKVTFQDIGVSVTVPAGTRLIEVSEKVGAGITYGCREGECCTCLTKIVSGGENLATPSILEDQVLKDNLAPRGHRLA
CQAQILGGELVVKPA

Sequences:

>Translated_95_residues
MPKAKVTFQDIGVSVTVPAGTRLIEVSEKVGAGITYGCREGECCTCLTKIVSGGENLATPSILEDQVLKDNLAPRGHRLA
CQAQILGGELVVKPA
>Mature_94_residues
PKAKVTFQDIGVSVTVPAGTRLIEVSEKVGAGITYGCREGECCTCLTKIVSGGENLATPSILEDQVLKDNLAPRGHRLAC
QAQILGGELVVKPA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin is required for nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 9923; Mature: 9791

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAKVTFQDIGVSVTVPAGTRLIEVSEKVGAGITYGCREGECCTCLTKIVSGGENLATP
CCCCEEEHHHCCEEEECCCCCEEEEECHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCC
SILEDQVLKDNLAPRGHRLACQAQILGGELVVKPA
CHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECC
>Mature Secondary Structure 
PKAKVTFQDIGVSVTVPAGTRLIEVSEKVGAGITYGCREGECCTCLTKIVSGGENLATP
CCCEEEHHHCCEEEECCCCCEEEEECHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCC
SILEDQVLKDNLAPRGHRLACQAQILGGELVVKPA
CHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2315024; 1847145; 8264535; 2071578 [H]