| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ureG
Identifier: 71907056
GI number: 71907056
Start: 1551671
End: 1552276
Strand: Reverse
Name: ureG
Synonym: Daro_1424
Alternate gene names: 71907056
Gene position: 1552276-1551671 (Counterclockwise)
Preceding gene: 71907057
Following gene: 71907049
Centisome position: 34.49
GC content: 61.55
Gene sequence:
>606_bases ATGAGCAAACAAGCACTCCGCGTCGGTATCGGCGGCCCGGTCGGGTCCGGCAAGACTGCCCTCACCCTCGCCCTCTGCCA AGCCCTGCGCGAGCAAATCGACATGGCTGTCGTCACCAACGATATCTACACCGCCGAGGATGCCAAGTTTCTGGTCAATC ACTCGGCGCTCGCGCCGGAGCGCATCATCGGCGTTGAAACCGGCGGCTGCCCGCACACGGCCATCCGCGAGGATGCCTCG ATCAATCTTGAGGCCATCGACCGCCTGCAACGCGCTTTCCCCGCTGTCGAACTGATCCTCGTCGAATCCGGCGGCGACAA TCTGGCCGCCACTTTCTCGCCCGAGCTGTCAGACCTGACCATCTATGTGATCGACGTCGCCGCTGGCGAGAAGATCCCGC GCAAGGGCGGGCCAGGCATCACCAAGTCCGACCTGCTGGTCATCAACAAGATCGATCTGGCACCAATGGTTGGCGCCTCA CTGGAAGTCATGGCGCACGACGCCAAGGTTCAGCGTGGCGAGCGGCCTTTTGTCTTTACCAATCTGAAGACTGGCCACGG CCTGGAGACCATCATCGAATTCATCCGCGAGAAAGGGATGCTCTAG
Upstream 100 bases:
>100_bases ACCCTGCCGAAATCCCGGTGGTCCAACTTCACGCCGGCCTTCGCCATCGCCTGCGCCCGCCACGAAACCCAATATTCACG TCTCTTCAGATCGTAAAATC
Downstream 100 bases:
>100_bases CCGGTCGCATCAGGTTCAGGCACTCGAGCGAGGCCGCAAGGTCCAGGGCACTGAAGTCGTCAAAGTTCTTCAGGGTCGGG TTCGCCCCTTTTTCCAGCAG
Product: urease accessory protein UreG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPERIIGVETGGCPHTAIREDAS INLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGAS LEVMAHDAKVQRGERPFVFTNLKTGHGLETIIEFIREKGML
Sequences:
>Translated_201_residues MSKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPERIIGVETGGCPHTAIREDAS INLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGAS LEVMAHDAKVQRGERPFVFTNLKTGHGLETIIEFIREKGML >Mature_200_residues SKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPERIIGVETGGCPHTAIREDASI NLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGASL EVMAHDAKVQRGERPFVFTNLKTGHGLETIIEFIREKGML
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREG_DECAR (Q47G58)
Other databases:
- EMBL: CP000089 - RefSeq: YP_284643.1 - ProteinModelPortal: Q47G58 - SMR: Q47G58 - STRING: Q47G58 - GeneID: 3569070 - GenomeReviews: CP000089_GR - KEGG: dar:Daro_1424 - NMPDR: fig|159087.4.peg.1277 - eggNOG: COG0378 - HOGENOM: HBG364734 - OMA: LCKAMRE - BioCyc: DARO159087:DARO_1424-MONOMER - GO: GO:0005737 - HAMAP: MF_01389 - InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 - PIRSF: PIRSF005624 - TIGRFAMs: TIGR00101
Pfam domain/function: PF02492 cobW
EC number: NA
Molecular weight: Translated: 21429; Mature: 21298
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPE CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCEEECCCCEEEECCCCCCCC RIIGVETGGCPHTAIREDASINLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLT CEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCCEE IYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGASLEVMAHDAKVQRGERPFVFT EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCEEEE NLKTGHGLETIIEFIREKGML ECCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SKQALRVGIGGPVGSGKTALTLALCQALREQIDMAVVTNDIYTAEDAKFLVNHSALAPE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCEEECCCCEEEECCCCCCCC RIIGVETGGCPHTAIREDASINLEAIDRLQRAFPAVELILVESGGDNLAATFSPELSDLT CEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCCEE IYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGASLEVMAHDAKVQRGERPFVFT EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHCCCCCEEEE NLKTGHGLETIIEFIREKGML ECCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA