| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906814
Identifier: 71906814
GI number: 71906814
Start: 1279913
End: 1280359
Strand: Reverse
Name: 71906814
Synonym: Daro_1175
Alternate gene names: NA
Gene position: 1280359-1279913 (Counterclockwise)
Preceding gene: 71906821
Following gene: 71906813
Centisome position: 28.45
GC content: 55.93
Gene sequence:
>447_bases TTGAATCGCTTTTTCGTATGCCTGTTCGCGCTGTCCACCTGGGCGGGCTGTGTTATCGCCGATGGCGAAGGCCCGACACC GCTCGGCATCTGGCGCGTCATCGGCGACAAGAGCGGTGAGGTTGAAGCGCTGGTTCGCATATCCGAACGCAACGGAGTTT ACGAAGGGCGAATTACGACCGTCTTTCCTCGCCCCGATGTTAATCCGGAGGCCCGTTGTGAACTGTGTCCGGGCGCACGG AAGGATCAACCGATAAAAGGTCTGATCATATTGACCGGCTTGCGGCGCGTCGGTACTGATTTCAAGGATGGGGAAATCCT TGATCCCGATAGCGGCGATCTTTATCGATGCAACCTGCAGGTCTCCGACGACAACCGGAAATTGTTCGTGCGCGGCTTTG TCGGATTTTCCCTGTTTGGACGTACCCAAACCTGGCTACGAGAATAA
Upstream 100 bases:
>100_bases CCGGGTGACAAGACACGCAGTTGCCCGCCTTCAGCAAACCACTTGCTCGATATCAGCTAGACTGGATGCACCAACCGCCC CATTGCCTTGGAGTCACACG
Downstream 100 bases:
>100_bases TCTGCATTTTTTCCTGACAGGATTTTGCAAGCTTCAGTGAGTAACCATACGGATTTGGCTGATCATAAATGCAAGTGCAA CCGACCTCTTCCCTTCCCTT
Product: putative signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNRFFVCLFALSTWAGCVIADGEGPTPLGIWRVIGDKSGEVEALVRISERNGVYEGRITTVFPRPDVNPEARCELCPGAR KDQPIKGLIILTGLRRVGTDFKDGEILDPDSGDLYRCNLQVSDDNRKLFVRGFVGFSLFGRTQTWLRE
Sequences:
>Translated_148_residues MNRFFVCLFALSTWAGCVIADGEGPTPLGIWRVIGDKSGEVEALVRISERNGVYEGRITTVFPRPDVNPEARCELCPGAR KDQPIKGLIILTGLRRVGTDFKDGEILDPDSGDLYRCNLQVSDDNRKLFVRGFVGFSLFGRTQTWLRE >Mature_148_residues MNRFFVCLFALSTWAGCVIADGEGPTPLGIWRVIGDKSGEVEALVRISERNGVYEGRITTVFPRPDVNPEARCELCPGAR KDQPIKGLIILTGLRRVGTDFKDGEILDPDSGDLYRCNLQVSDDNRKLFVRGFVGFSLFGRTQTWLRE
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16538; Mature: 16538
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFFVCLFALSTWAGCVIADGEGPTPLGIWRVIGDKSGEVEALVRISERNGVYEGRITT CCEEEEEEEEHHHCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCEEEE VFPRPDVNPEARCELCPGARKDQPIKGLIILTGLRRVGTDFKDGEILDPDSGDLYRCNLQ EECCCCCCCCCEEEECCCCCCCCCCEEEEEEECHHHHCCCCCCCEEECCCCCCEEEEEEE VSDDNRKLFVRGFVGFSLFGRTQTWLRE ECCCCCEEEEEEEECEEEECCCHHHHCC >Mature Secondary Structure MNRFFVCLFALSTWAGCVIADGEGPTPLGIWRVIGDKSGEVEALVRISERNGVYEGRITT CCEEEEEEEEHHHCCCEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCEEEE VFPRPDVNPEARCELCPGARKDQPIKGLIILTGLRRVGTDFKDGEILDPDSGDLYRCNLQ EECCCCCCCCCEEEECCCCCCCCCCEEEEEEECHHHHCCCCCCCEEECCCCCCEEEEEEE VSDDNRKLFVRGFVGFSLFGRTQTWLRE ECCCCCEEEEEEEECEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA