| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906813
Identifier: 71906813
GI number: 71906813
Start: 1279026
End: 1279844
Strand: Reverse
Name: 71906813
Synonym: Daro_1174
Alternate gene names: NA
Gene position: 1279844-1279026 (Counterclockwise)
Preceding gene: 71906814
Following gene: 71906812
Centisome position: 28.43
GC content: 58.12
Gene sequence:
>819_bases ATGCAAGTGCAACCGACCTCTTCCCTTCCCTTGGCGTTGTTTCACGGCCTTCTTTCCTCCCCGCAGGAATTTGGCCTGAT CACCCATTGGTTGCGAAACAACGGCGTGACCCACCTTGCACCGACCGTCCCGGGCTACACGCTGGCGGTCGATGAGCAAT CGCCCGATTGGCGAAAGTGGCAGAGTGCGGCGGTAGATATCGTTGACACCTTCGGCAACGGCGACGAACCGATCATCCTG GGTGGCTTGTGCATGGGCGGTGTCCTTGCCGCCGCCGCAGCACTGAAAACCCGTCGCAAAATCGCTGGCCTGATCCTGAT GTCGCCAACGTTTGACTACGATGGCTGGGGCTTGTCTCCGACTCGCCATTTGCGTCACTTTGGCTATTGGACGGGACTGG ACCGCTTCTTTTCGGTGACCGAACGCGAGCCCTATGGCGTCAAGAGCCCGAAAATTCGTAAATGGGTGATTCGCGAAATG GCCGAACGCGCCAGCTCGGCCGTCGGTCCGTCGCGCATTCCGCTGCGGGCCTTGCGTGAAGGTGAGCGAATGATGGCCCA TGTGCGCGCCCATCTGGCCGACATCGATTGCCCCGTGCTGATCATGCACGCCAGAGAAGATGAAATCACCACGCTGGCCA GCGTGCAGCGATTGTTTGATGCGCTCCCCCAGCACGACAAGGAACTTGCAGTGCTTGAAAACAGCTACCACATGATCACG ATCGACAATGATCGTCACGAGGTTTCCAGACTCGTGGAACGCTTCATGAAAAGGGTTAGCACCGAATACCTAGCTTCGAA TTTCCCTGTCGCTGCCTGA
Upstream 100 bases:
>100_bases TTGGACGTACCCAAACCTGGCTACGAGAATAATCTGCATTTTTTCCTGACAGGATTTTGCAAGCTTCAGTGAGTAACCAT ACGGATTTGGCTGATCATAA
Downstream 100 bases:
>100_bases CGGGAAAATTCTGCCACCGGCTCAAGTCGCTCATTGAGCCAACCGAGTCCCACCCAATTGCTACGAGGTCACCATGAACA CACTTGAAGAACTCAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxylesterase; Esterase; Alpha/Beta Hydrolase Fold; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase; Thermostable Monoacylglycerol Lipase; Esterase/Lipase-Like; Esterase/Lipase/Thioesterase Protein; Lipase
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQVQPTSSLPLALFHGLLSSPQEFGLITHWLRNNGVTHLAPTVPGYTLAVDEQSPDWRKWQSAAVDIVDTFGNGDEPIIL GGLCMGGVLAAAAALKTRRKIAGLILMSPTFDYDGWGLSPTRHLRHFGYWTGLDRFFSVTEREPYGVKSPKIRKWVIREM AERASSAVGPSRIPLRALREGERMMAHVRAHLADIDCPVLIMHAREDEITTLASVQRLFDALPQHDKELAVLENSYHMIT IDNDRHEVSRLVERFMKRVSTEYLASNFPVAA
Sequences:
>Translated_272_residues MQVQPTSSLPLALFHGLLSSPQEFGLITHWLRNNGVTHLAPTVPGYTLAVDEQSPDWRKWQSAAVDIVDTFGNGDEPIIL GGLCMGGVLAAAAALKTRRKIAGLILMSPTFDYDGWGLSPTRHLRHFGYWTGLDRFFSVTEREPYGVKSPKIRKWVIREM AERASSAVGPSRIPLRALREGERMMAHVRAHLADIDCPVLIMHAREDEITTLASVQRLFDALPQHDKELAVLENSYHMIT IDNDRHEVSRLVERFMKRVSTEYLASNFPVAA >Mature_272_residues MQVQPTSSLPLALFHGLLSSPQEFGLITHWLRNNGVTHLAPTVPGYTLAVDEQSPDWRKWQSAAVDIVDTFGNGDEPIIL GGLCMGGVLAAAAALKTRRKIAGLILMSPTFDYDGWGLSPTRHLRHFGYWTGLDRFFSVTEREPYGVKSPKIRKWVIREM AERASSAVGPSRIPLRALREGERMMAHVRAHLADIDCPVLIMHAREDEITTLASVQRLFDALPQHDKELAVLENSYHMIT IDNDRHEVSRLVERFMKRVSTEYLASNFPVAA
Specific function: Unknown
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30508; Mature: 30508
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQPTSSLPLALFHGLLSSPQEFGLITHWLRNNGVTHLAPTVPGYTLAVDEQSPDWRKW CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHH QSAAVDIVDTFGNGDEPIILGGLCMGGVLAAAAALKTRRKIAGLILMSPTFDYDGWGLSP HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCH TRHLRHFGYWTGLDRFFSVTEREPYGVKSPKIRKWVIREMAERASSAVGPSRIPLRALRE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GERMMAHVRAHLADIDCPVLIMHAREDEITTLASVQRLFDALPQHDKELAVLENSYHMIT HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE IDNDRHEVSRLVERFMKRVSTEYLASNFPVAA ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQVQPTSSLPLALFHGLLSSPQEFGLITHWLRNNGVTHLAPTVPGYTLAVDEQSPDWRKW CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHH QSAAVDIVDTFGNGDEPIILGGLCMGGVLAAAAALKTRRKIAGLILMSPTFDYDGWGLSP HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCH TRHLRHFGYWTGLDRFFSVTEREPYGVKSPKIRKWVIREMAERASSAVGPSRIPLRALRE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GERMMAHVRAHLADIDCPVLIMHAREDEITTLASVQRLFDALPQHDKELAVLENSYHMIT HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE IDNDRHEVSRLVERFMKRVSTEYLASNFPVAA ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA