| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906763
Identifier: 71906763
GI number: 71906763
Start: 1226228
End: 1226449
Strand: Reverse
Name: 71906763
Synonym: Daro_1124
Alternate gene names: NA
Gene position: 1226449-1226228 (Counterclockwise)
Preceding gene: 71906769
Following gene: 71906760
Centisome position: 27.25
GC content: 50.45
Gene sequence:
>222_bases ATGTCACTGCACCCGCTGAGCGAACCAGAAATCAGCGATATCCGCGCCCAACTTCATGAGTTGCAAATTGAACACCGCGA CCTTGACCTGGTAATCACCCATCTGATCGACAATCCGCCACCGGATGACTTACTGATTCGGCGCCTGAAGAAACGTAAAT TGCTATTGAAAGACCGGATTCTGCAGCTAGAGGAATTGCTGGTTCCGGATATCCCTGCCTAA
Upstream 100 bases:
>100_bases TTTGCCGAACGAGACGATTACATGGTGCTGCATTTCTCTCTCCTCCGTTGATCTGTTCAAGGTATTCTAGCAAAACAAAA GAAGCCGTCAGGAGTTGTAA
Downstream 100 bases:
>100_bases CGACTGCTTGGCGGAATACGAAAGAAAACCCAGTAGACGCCGCCAATCACGCCGGCGATGGCCAGCTCCCAGAGAAAGGG GAACCTCCATACAAGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSLHPLSEPEISDIRAQLHELQIEHRDLDLVITHLIDNPPPDDLLIRRLKKRKLLLKDRILQLEELLVPDIPA
Sequences:
>Translated_73_residues MSLHPLSEPEISDIRAQLHELQIEHRDLDLVITHLIDNPPPDDLLIRRLKKRKLLLKDRILQLEELLVPDIPA >Mature_72_residues SLHPLSEPEISDIRAQLHELQIEHRDLDLVITHLIDNPPPDDLLIRRLKKRKLLLKDRILQLEELLVPDIPA
Specific function: Unknown
COG id: COG5481
COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8553; Mature: 8422
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHPLSEPEISDIRAQLHELQIEHRDLDLVITHLIDNPPPDDLLIRRLKKRKLLLKDRI CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LQLEELLVPDIPA HHHHHHHCCCCCC >Mature Secondary Structure SLHPLSEPEISDIRAQLHELQIEHRDLDLVITHLIDNPPPDDLLIRRLKKRKLLLKDRI CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LQLEELLVPDIPA HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA