| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is tas [H]
Identifier: 71906759
GI number: 71906759
Start: 1222919
End: 1223965
Strand: Reverse
Name: tas [H]
Synonym: Daro_1120
Alternate gene names: 71906759
Gene position: 1223965-1222919 (Counterclockwise)
Preceding gene: 71906760
Following gene: 71906758
Centisome position: 27.19
GC content: 59.69
Gene sequence:
>1047_bases ATGAATCCTTTCCAGAAAAATCCGCTAGGGCGCAACCACTTCGAAGTTCCCGAAGTCTGTCTTGGCACGATGACCTTCGG TGAGCAGACCAGCGAGAGTGACGCGCACGCCCAGCTCGACTTTGCGCTGGCCAATGGCATCAATTTCATCGACACCGCAG AGATGTATGCTGTCCCGCCACGCGCGGAAACCTGTGGCGCCTCGGAAACCATTGTCGGCCACTGGTTGAAGCGCCAGGCC CGCGACAAGGTCTTGATCGCGACCAAGGTCGCCGGCCCAAGCCGCAACCTGAACTGGATCCGCAACGGTCCGCCTGCCCT GGACAGAACAAATATCCGAGCAGCCATCGACGGTTCGTTGCAACGCCTGCAAACGGATTACGTCGACCTCTACCAACTTC ACTGGCCCGAGCGCAACCAGCCGATGTTCGGACAATGGCAATTCGATCCCGACAAGGAACGCGACGGCACTCCCATCCGT GAGCAGCTTGAAGCACTCGGCGAACTCGTTCGGGAGGGCAAGATCCGCCATATCGGCGTCTCCAACGAACACCCGTGGGG CATCATGCAATTCACCCGGCTGGCCGATGAATTGGGCCTGCCGCACATCGTGTCGACGCAAAATTCCTACAGCCTGCTGA ACCGCACTTTTGAAACGGGACTGGCTGAAGTCTGTCACCGCGAACGGGTCGGCCTGCTGGCCTACTCCCCCCTCGCTTTC GGGCACCTGACCGGCAAATATTTGAACCAACCGGATGCGCCGGGCCGCCTGACCCAATGGCCGAGCTTTGGACAACGCTA CACCAAACCCAACGTCATTCCCGCCGTTCAGGCTTACGCCGAGCTGGCCAGGAAACATGACCTGACACCAACTCAGCTGG CACTCGGTTTCGCCCGGTCGCGCTGGTTCGTCGCCAGTACCATCATCGGCGCCTCGTCGCTTGAACAACTCAAGGAAACG CTACCGGCCACGCAGACGCCGATGTCGCAAGAAATACTGGCCGAGATCGACGCCATCCATTTGCGCTACACCAATCCTGC GCCATGA
Upstream 100 bases:
>100_bases CTCGCTATCGTCCCGGCCGGCTACGACTCAATACTTGAGCGCCACATACTGATATATGGCGTTCTTGGCGGACAACCATG ATGCATATCGGAGACCTCTC
Downstream 100 bases:
>100_bases CCGAATCGCTGTTTCCACGCCTATCAAATGCCCTCGCGGCGACCGATATCGCCGAGAAGATCGAGTTGACGGCGAAAATC GCTGCAGACTGGCGGGCCGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNPFQKNPLGRNHFEVPEVCLGTMTFGEQTSESDAHAQLDFALANGINFIDTAEMYAVPPRAETCGASETIVGHWLKRQA RDKVLIATKVAGPSRNLNWIRNGPPALDRTNIRAAIDGSLQRLQTDYVDLYQLHWPERNQPMFGQWQFDPDKERDGTPIR EQLEALGELVREGKIRHIGVSNEHPWGIMQFTRLADELGLPHIVSTQNSYSLLNRTFETGLAEVCHRERVGLLAYSPLAF GHLTGKYLNQPDAPGRLTQWPSFGQRYTKPNVIPAVQAYAELARKHDLTPTQLALGFARSRWFVASTIIGASSLEQLKET LPATQTPMSQEILAEIDAIHLRYTNPAP
Sequences:
>Translated_348_residues MNPFQKNPLGRNHFEVPEVCLGTMTFGEQTSESDAHAQLDFALANGINFIDTAEMYAVPPRAETCGASETIVGHWLKRQA RDKVLIATKVAGPSRNLNWIRNGPPALDRTNIRAAIDGSLQRLQTDYVDLYQLHWPERNQPMFGQWQFDPDKERDGTPIR EQLEALGELVREGKIRHIGVSNEHPWGIMQFTRLADELGLPHIVSTQNSYSLLNRTFETGLAEVCHRERVGLLAYSPLAF GHLTGKYLNQPDAPGRLTQWPSFGQRYTKPNVIPAVQAYAELARKHDLTPTQLALGFARSRWFVASTIIGASSLEQLKET LPATQTPMSQEILAEIDAIHLRYTNPAP >Mature_348_residues MNPFQKNPLGRNHFEVPEVCLGTMTFGEQTSESDAHAQLDFALANGINFIDTAEMYAVPPRAETCGASETIVGHWLKRQA RDKVLIATKVAGPSRNLNWIRNGPPALDRTNIRAAIDGSLQRLQTDYVDLYQLHWPERNQPMFGQWQFDPDKERDGTPIR EQLEALGELVREGKIRHIGVSNEHPWGIMQFTRLADELGLPHIVSTQNSYSLLNRTFETGLAEVCHRERVGLLAYSPLAF GHLTGKYLNQPDAPGRLTQWPSFGQRYTKPNVIPAVQAYAELARKHDLTPTQLALGFARSRWFVASTIIGASSLEQLKET LPATQTPMSQEILAEIDAIHLRYTNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436962, Length=352, Percent_Identity=29.5454545454545, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI27436964, Length=352, Percent_Identity=29.5454545454545, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI27436966, Length=352, Percent_Identity=29.5454545454545, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4504825, Length=352, Percent_Identity=28.125, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI27436969, Length=347, Percent_Identity=27.9538904899135, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI27436971, Length=344, Percent_Identity=29.0697674418605, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI223718702, Length=328, Percent_Identity=29.8780487804878, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI41327764, Length=324, Percent_Identity=29.9382716049383, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI41152114, Length=328, Percent_Identity=28.0487804878049, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=51.7341040462428, Blast_Score=343, Evalue=1e-95, Organism=Escherichia coli, GI87081735, Length=345, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788070, Length=343, Percent_Identity=30.0291545189504, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1789375, Length=344, Percent_Identity=29.3604651162791, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1788081, Length=337, Percent_Identity=27.5964391691395, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6325169, Length=353, Percent_Identity=24.929178470255, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=308, Percent_Identity=24.3506493506494, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=338, Percent_Identity=23.6686390532544, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=326, Percent_Identity=23.3128834355828, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=271, Percent_Identity=21.4022140221402, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324694, Length=237, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39041; Mature: 39041
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFQKNPLGRNHFEVPEVCLGTMTFGEQTSESDAHAQLDFALANGINFIDTAEMYAVPP CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEHHHHHCCCCCEECHHHEECCC RAETCGASETIVGHWLKRQARDKVLIATKVAGPSRNLNWIRNGPPALDRTNIRAAIDGSL CHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QRLQTDYVDLYQLHWPERNQPMFGQWQFDPDKERDGTPIREQLEALGELVREGKIRHIGV HHHHHHHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC SNEHPWGIMQFTRLADELGLPHIVSTQNSYSLLNRTFETGLAEVCHRERVGLLAYSPLAF CCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH GHLTGKYLNQPDAPGRLTQWPSFGQRYTKPNVIPAVQAYAELARKHDLTPTQLALGFARS HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH RWFVASTIIGASSLEQLKETLPATQTPMSQEILAEIDAIHLRYTNPAP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MNPFQKNPLGRNHFEVPEVCLGTMTFGEQTSESDAHAQLDFALANGINFIDTAEMYAVPP CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHEEHHHHHCCCCCEECHHHEECCC RAETCGASETIVGHWLKRQARDKVLIATKVAGPSRNLNWIRNGPPALDRTNIRAAIDGSL CHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QRLQTDYVDLYQLHWPERNQPMFGQWQFDPDKERDGTPIREQLEALGELVREGKIRHIGV HHHHHHHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC SNEHPWGIMQFTRLADELGLPHIVSTQNSYSLLNRTFETGLAEVCHRERVGLLAYSPLAF CCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH GHLTGKYLNQPDAPGRLTQWPSFGQRYTKPNVIPAVQAYAELARKHDLTPTQLALGFARS HHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH RWFVASTIIGASSLEQLKETLPATQTPMSQEILAEIDAIHLRYTNPAP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]