Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906758

Identifier: 71906758

GI number: 71906758

Start: 1222128

End: 1222922

Strand: Reverse

Name: 71906758

Synonym: Daro_1119

Alternate gene names: NA

Gene position: 1222922-1222128 (Counterclockwise)

Preceding gene: 71906759

Following gene: 71906757

Centisome position: 27.17

GC content: 61.26

Gene sequence:

>795_bases
ATGACCGAATCGCTGTTTCCACGCCTATCAAATGCCCTCGCGGCGACCGATATCGCCGAGAAGATCGAGTTGACGGCGAA
AATCGCTGCAGACTGGCGGGCCGGCAAACTGGATTGGCGCGATAGCACACCAGTCCCGCTGACCTGCGGCCGCCCCGCCA
AACCGGAACTGGTCACGCACAAAGAAGTCTTGCAGCGCAGCCCGCAAACTCCGGAAGGACGAGCCCACCTGCTACACGCC
ATCGTGCATATCGAATTCACGGCAATCAACCTCGCCCTCGATCACGCCGCCCGCTTCCGCAATATGCCTGAACAGTACTA
TGGCGACTGGATCGGCGTCGCAGCCGAGGAGGCCGAGCACTTTCAGCTGTTGCGTGAGCGCCTGCAGTCGCTGAACCACG
ACTACGGCGATTTCCCTGCCCACGCCGGCCTCTGGGAAATGGCCGAGAAGACTGAAAACGACGTTTTGGCCCGCATGGCG
TTGGTCCCCCGCCTGCTCGAAGCGCGGGGCCTTGATGCCACACCGCCTATCCAAAAAAAGCTGGAAGCCGCCGGCGATCA
TCAAAGCGCCCGGGCGCTGGACATCATCCTGCGTGACGAAATCGGTCATGTCGGGCTTGGCGACCGCTGGTTTCGCTACC
TTTGCGCCGAACGTAACCTGGCACCGGAAAGCACCTACCGCGAGCTCCTTACCCACTTCAAAGCGCCGTGGCCACAGGCC
CCGATGAACGAATCGGCGCGCCTTTCTGCCGGTTTCAGCGCGGATGAACTGGCGGGACTGACAAAAAAAAGGTAG

Upstream 100 bases:

>100_bases
AACAACTCAAGGAAACGCTACCGGCCACGCAGACGCCGATGTCGCAAGAAATACTGGCCGAGATCGACGCCATCCATTTG
CGCTACACCAATCCTGCGCC

Downstream 100 bases:

>100_bases
AATAATCAACTCAATGCGTTGATGCATCGCCCGCAGTAACTCCGAGCAGCCCCCGGTTTTGAAGGTTCTTGTGCAGGATT
CACCCCATTGATTCGTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHA
IVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMA
LVPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA
PMNESARLSAGFSADELAGLTKKR

Sequences:

>Translated_264_residues
MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHA
IVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMA
LVPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA
PMNESARLSAGFSADELAGLTKKR
>Mature_263_residues
TESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHAI
VHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMAL
VPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQAP
MNESARLSAGFSADELAGLTKKR

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 29649; Mature: 29518

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
KEVLQRSPQTPEGRAHLLHAIVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
FQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMALVPRLLEARGLDATPPIQKK
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA
HHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
PMNESARLSAGFSADELAGLTKKR
CCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
KEVLQRSPQTPEGRAHLLHAIVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEH
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
FQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMALVPRLLEARGLDATPPIQKK
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA
HHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
PMNESARLSAGFSADELAGLTKKR
CCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]