| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906758
Identifier: 71906758
GI number: 71906758
Start: 1222128
End: 1222922
Strand: Reverse
Name: 71906758
Synonym: Daro_1119
Alternate gene names: NA
Gene position: 1222922-1222128 (Counterclockwise)
Preceding gene: 71906759
Following gene: 71906757
Centisome position: 27.17
GC content: 61.26
Gene sequence:
>795_bases ATGACCGAATCGCTGTTTCCACGCCTATCAAATGCCCTCGCGGCGACCGATATCGCCGAGAAGATCGAGTTGACGGCGAA AATCGCTGCAGACTGGCGGGCCGGCAAACTGGATTGGCGCGATAGCACACCAGTCCCGCTGACCTGCGGCCGCCCCGCCA AACCGGAACTGGTCACGCACAAAGAAGTCTTGCAGCGCAGCCCGCAAACTCCGGAAGGACGAGCCCACCTGCTACACGCC ATCGTGCATATCGAATTCACGGCAATCAACCTCGCCCTCGATCACGCCGCCCGCTTCCGCAATATGCCTGAACAGTACTA TGGCGACTGGATCGGCGTCGCAGCCGAGGAGGCCGAGCACTTTCAGCTGTTGCGTGAGCGCCTGCAGTCGCTGAACCACG ACTACGGCGATTTCCCTGCCCACGCCGGCCTCTGGGAAATGGCCGAGAAGACTGAAAACGACGTTTTGGCCCGCATGGCG TTGGTCCCCCGCCTGCTCGAAGCGCGGGGCCTTGATGCCACACCGCCTATCCAAAAAAAGCTGGAAGCCGCCGGCGATCA TCAAAGCGCCCGGGCGCTGGACATCATCCTGCGTGACGAAATCGGTCATGTCGGGCTTGGCGACCGCTGGTTTCGCTACC TTTGCGCCGAACGTAACCTGGCACCGGAAAGCACCTACCGCGAGCTCCTTACCCACTTCAAAGCGCCGTGGCCACAGGCC CCGATGAACGAATCGGCGCGCCTTTCTGCCGGTTTCAGCGCGGATGAACTGGCGGGACTGACAAAAAAAAGGTAG
Upstream 100 bases:
>100_bases AACAACTCAAGGAAACGCTACCGGCCACGCAGACGCCGATGTCGCAAGAAATACTGGCCGAGATCGACGCCATCCATTTG CGCTACACCAATCCTGCGCC
Downstream 100 bases:
>100_bases AATAATCAACTCAATGCGTTGATGCATCGCCCGCAGTAACTCCGAGCAGCCCCCGGTTTTGAAGGTTCTTGTGCAGGATT CACCCCATTGATTCGTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHA IVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMA LVPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA PMNESARLSAGFSADELAGLTKKR
Sequences:
>Translated_264_residues MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHA IVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMA LVPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA PMNESARLSAGFSADELAGLTKKR >Mature_263_residues TESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTHKEVLQRSPQTPEGRAHLLHAI VHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEHFQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMAL VPRLLEARGLDATPPIQKKLEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQAP MNESARLSAGFSADELAGLTKKR
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 29649; Mature: 29518
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHH KEVLQRSPQTPEGRAHLLHAIVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEH HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH FQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMALVPRLLEARGLDATPPIQKK HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA HHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC PMNESARLSAGFSADELAGLTKKR CCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TESLFPRLSNALAATDIAEKIELTAKIAADWRAGKLDWRDSTPVPLTCGRPAKPELVTH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHH KEVLQRSPQTPEGRAHLLHAIVHIEFTAINLALDHAARFRNMPEQYYGDWIGVAAEEAEH HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH FQLLRERLQSLNHDYGDFPAHAGLWEMAEKTENDVLARMALVPRLLEARGLDATPPIQKK HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LEAAGDHQSARALDIILRDEIGHVGLGDRWFRYLCAERNLAPESTYRELLTHFKAPWPQA HHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC PMNESARLSAGFSADELAGLTKKR CCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]