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The map label for this gene is tonB2 [H]

Identifier: 71906755

GI number: 71906755

Start: 1218503

End: 1219141

Strand: Reverse

Name: tonB2 [H]

Synonym: Daro_1116

Alternate gene names: 71906755

Gene position: 1219141-1218503 (Counterclockwise)

Preceding gene: 71906756

Following gene: 71906754

Centisome position: 27.09

GC content: 60.88

Gene sequence:

>639_bases
ATGAGCTACGTCCTTTCCCGACCTTCTTCAGCCCAGCGCAGCGGCTTGCTCGGCATTGTGATCGGTGCTCACATTGCGGT
CTTCCTGCTGGTTATCGCGGCCAGAACGGTCGTGCCACAGATCATGGAAATACCGCTGGTTGTCGATCTGCTTGAACCGG
CTCCGGTCGCCCAGAAACAACCTGAAGCAAAAGCGCCGCCCATTGCCAAGCCACAGCCGATCCGTCAGTCAGCGCCAAAG
ATACCGGCACCAGTGATCGAAGCCACCCAGAGCAATGCTCCAGCCCCGTCGGCCCCTGTAGCAACGCTGCCCGACGTCAA
ACCAGCCCCGCCAGTCGCACCGGTTGCCGAGGCAATCAGCCAGGCACGTTTCGATGCCGACTACCTGCGCAACCCTGCCC
CACCCTACCCGCCACTCTCCCGCCGCATGGGCGAAGAAGGCAAGGTCATCTTGCGCGTCTCGGTCAATCCGCAAGGTGCC
GCCGACAGCGTTGAGGTCAAGACCTCCTCCGGCAGCCAGCGCCTTGACGATTCGGCCCAGAAGACCGTGCGCAACTGGAA
ATTTGTGCCAGCCAAACGAGGCGACACCGCCATCCAGAGCTGGGTACTGGTGCCCATCATTTTCAAATTGGAGCAATAA

Upstream 100 bases:

>100_bases
TCCCTCCGTTGTAAATCTCTCGTTCCCATAGCCAGCCAGTGAAACGCCAGCCAGCCAAGGTTTTTTTGCCGAACGTTCGG
AAGAAACTGAATATAAATTG

Downstream 100 bases:

>100_bases
CAAATGCAGGAAACAGCACAAAATGCCTTCGGCTTTGCCCACCTTTGGGCCAGCGGTGACCTGATCTCCCATGCCATTGC
CTGCATTCTTGCCGTCATGT

Product: TonB, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSYVLSRPSSAQRSGLLGIVIGAHIAVFLLVIAARTVVPQIMEIPLVVDLLEPAPVAQKQPEAKAPPIAKPQPIRQSAPK
IPAPVIEATQSNAPAPSAPVATLPDVKPAPPVAPVAEAISQARFDADYLRNPAPPYPPLSRRMGEEGKVILRVSVNPQGA
ADSVEVKTSSGSQRLDDSAQKTVRNWKFVPAKRGDTAIQSWVLVPIIFKLEQ

Sequences:

>Translated_212_residues
MSYVLSRPSSAQRSGLLGIVIGAHIAVFLLVIAARTVVPQIMEIPLVVDLLEPAPVAQKQPEAKAPPIAKPQPIRQSAPK
IPAPVIEATQSNAPAPSAPVATLPDVKPAPPVAPVAEAISQARFDADYLRNPAPPYPPLSRRMGEEGKVILRVSVNPQGA
ADSVEVKTSSGSQRLDDSAQKTVRNWKFVPAKRGDTAIQSWVLVPIIFKLEQ
>Mature_211_residues
SYVLSRPSSAQRSGLLGIVIGAHIAVFLLVIAARTVVPQIMEIPLVVDLLEPAPVAQKQPEAKAPPIAKPQPIRQSAPKI
PAPVIEATQSNAPAPSAPVATLPDVKPAPPVAPVAEAISQARFDADYLRNPAPPYPPLSRRMGEEGKVILRVSVNPQGAA
DSVEVKTSSGSQRLDDSAQKTVRNWKFVPAKRGDTAIQSWVLVPIIFKLEQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 22584; Mature: 22453

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVLSRPSSAQRSGLLGIVIGAHIAVFLLVIAARTVVPQIMEIPLVVDLLEPAPVAQKQ
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
PEAKAPPIAKPQPIRQSAPKIPAPVIEATQSNAPAPSAPVATLPDVKPAPPVAPVAEAIS
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QARFDADYLRNPAPPYPPLSRRMGEEGKVILRVSVNPQGAADSVEVKTSSGSQRLDDSAQ
HHHCCHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH
KTVRNWKFVPAKRGDTAIQSWVLVPIIFKLEQ
HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SYVLSRPSSAQRSGLLGIVIGAHIAVFLLVIAARTVVPQIMEIPLVVDLLEPAPVAQKQ
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
PEAKAPPIAKPQPIRQSAPKIPAPVIEATQSNAPAPSAPVATLPDVKPAPPVAPVAEAIS
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QARFDADYLRNPAPPYPPLSRRMGEEGKVILRVSVNPQGAADSVEVKTSSGSQRLDDSAQ
HHHCCHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHH
KTVRNWKFVPAKRGDTAIQSWVLVPIIFKLEQ
HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]