| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is nemA [H]
Identifier: 71906738
GI number: 71906738
Start: 1201948
End: 1203030
Strand: Reverse
Name: nemA [H]
Synonym: Daro_1099
Alternate gene names: 71906738
Gene position: 1203030-1201948 (Counterclockwise)
Preceding gene: 71906739
Following gene: 71906737
Centisome position: 26.73
GC content: 66.94
Gene sequence:
>1083_bases ATGACTACCTTGTTCGATCCAATCCAGATGGGCGACATCGCCCTTGCCAACCGTATCGTGATGGCTCCGCTGACGCGCAA CCGCGCCATCGAGGGCAACAAGCCCGGCCCGCTGACCGTCGAGTACTACCGCCAGCGCGCCACGGCCGGCCTGATCGTCG CCGAAGCCAGCCCGATCAGCCCGACCGCCCAGGGGTACCTCGACACCCCGGGCATCTGGTCGGCCGAGCAGGTCGTGGCC TGGCAGGCCGTAACCAAGGCCGTGCATGCCGAAGGCGGCAAGATCGTGCTGCAGCTCTGGCACGTCGGCCGCATTTCGCA CATCTCGCTGCTGCCGGCTGGCGAAGTGCCGGTGTCGTCCACCGACAAGGTGGCCGATGCATCGACCTTTACCAGCGAAG GCTTCATCCCCGTGTCCAAGCCGCGCGCCCTGCACGACGACGAAATCCCGGCGCTGATCGAGGACTACCGCAAGGCCGCC CGCAATGCGATCGCCGCCGGCTTCGACGGTGTCGAGATCCACGCCGCCAACACCTACCTGATCGAGCAGTTCCTGCGCGA CAGCGTCAATGACCGCAGCGGCCCGTACGGCGGCAGCATCGAGAACCGCACCCGCCTGTTGCTCGAAGTCACCCGCGCTG TTGCCGGCGAAATCGGTGCTGGCCGCACCGGCATCCGCCTGAGCCCGATGACCACCTTCACGGCACCGCTCGACAGCAAC CCGCAGGCGCTCTACGGCTATGTCGTCGAGCAACTGGCCCCGCTCGGCCTGGCTTACCTGCATGTAATCGAAGGCGAAAC CGGCGGCACCCGCACGCCGGAGGGCAAGCCTTTCGACTACGCGGCCCTGCACCGCGCCTACCCCGGCGTCTGGATGCTCA ATAATGGCTACGACCGCGACCTGGCGCTGCAAACCGTCGCCGACGGCAAGGCCGACCTGATCGCCTTTGGCCGTCCGTTC ATCAGCACGCCCGACCTCGTCCGCCGTCTGCGCGACGGTGCGCCGTTGAACGAATTGCGCGCCGACAAGCTCTATGGTGG TGGCGCCGAGGGTTACACCGACTACCCGACGCTGGCCGGCTAA
Upstream 100 bases:
>100_bases GCACATGCAAACGTCAATGGCCGCCTCCATAGCGGCCATTTTTTGAACCCTATCACTAGACGACTGGTCTATTTAGCCAA CCACTTCAGAGGAGCACCGT
Downstream 100 bases:
>100_bases CAACAACAAACCCCAACCCCAGGCCGCGCACCGGAAAATCCGGGCGCGGCCCACAGAGAACCGCATGAATTCCTACCGCC GCTGGCTTCCAGCCATCGCC
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTTLFDPIQMGDIALANRIVMAPLTRNRAIEGNKPGPLTVEYYRQRATAGLIVAEASPISPTAQGYLDTPGIWSAEQVVA WQAVTKAVHAEGGKIVLQLWHVGRISHISLLPAGEVPVSSTDKVADASTFTSEGFIPVSKPRALHDDEIPALIEDYRKAA RNAIAAGFDGVEIHAANTYLIEQFLRDSVNDRSGPYGGSIENRTRLLLEVTRAVAGEIGAGRTGIRLSPMTTFTAPLDSN PQALYGYVVEQLAPLGLAYLHVIEGETGGTRTPEGKPFDYAALHRAYPGVWMLNNGYDRDLALQTVADGKADLIAFGRPF ISTPDLVRRLRDGAPLNELRADKLYGGGAEGYTDYPTLAG
Sequences:
>Translated_360_residues MTTLFDPIQMGDIALANRIVMAPLTRNRAIEGNKPGPLTVEYYRQRATAGLIVAEASPISPTAQGYLDTPGIWSAEQVVA WQAVTKAVHAEGGKIVLQLWHVGRISHISLLPAGEVPVSSTDKVADASTFTSEGFIPVSKPRALHDDEIPALIEDYRKAA RNAIAAGFDGVEIHAANTYLIEQFLRDSVNDRSGPYGGSIENRTRLLLEVTRAVAGEIGAGRTGIRLSPMTTFTAPLDSN PQALYGYVVEQLAPLGLAYLHVIEGETGGTRTPEGKPFDYAALHRAYPGVWMLNNGYDRDLALQTVADGKADLIAFGRPF ISTPDLVRRLRDGAPLNELRADKLYGGGAEGYTDYPTLAG >Mature_359_residues TTLFDPIQMGDIALANRIVMAPLTRNRAIEGNKPGPLTVEYYRQRATAGLIVAEASPISPTAQGYLDTPGIWSAEQVVAW QAVTKAVHAEGGKIVLQLWHVGRISHISLLPAGEVPVSSTDKVADASTFTSEGFIPVSKPRALHDDEIPALIEDYRKAAR NAIAAGFDGVEIHAANTYLIEQFLRDSVNDRSGPYGGSIENRTRLLLEVTRAVAGEIGAGRTGIRLSPMTTFTAPLDSNP QALYGYVVEQLAPLGLAYLHVIEGETGGTRTPEGKPFDYAALHRAYPGVWMLNNGYDRDLALQTVADGKADLIAFGRPFI STPDLVRRLRDGAPLNELRADKLYGGGAEGYTDYPTLAG
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=365, Percent_Identity=47.6712328767123, Blast_Score=307, Evalue=7e-85, Organism=Escherichia coli, GI1789463, Length=361, Percent_Identity=29.0858725761773, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17559802, Length=266, Percent_Identity=29.6992481203008, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17559804, Length=272, Percent_Identity=27.2058823529412, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17565138, Length=269, Percent_Identity=29.368029739777, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17564188, Length=137, Percent_Identity=33.5766423357664, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72001454, Length=277, Percent_Identity=27.0758122743682, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17540738, Length=134, Percent_Identity=34.3283582089552, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6325086, Length=375, Percent_Identity=40, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321973, Length=375, Percent_Identity=38.4, Blast_Score=213, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38752; Mature: 38621
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLFDPIQMGDIALANRIVMAPLTRNRAIEGNKPGPLTVEYYRQRATAGLIVAEASPIS CCCCCCCHHHCCHHHHCEEEEEECCCCCCCCCCCCCCEEHHHHHHHCCCEEEEECCCCCC PTAQGYLDTPGIWSAEQVVAWQAVTKAVHAEGGKIVLQLWHVGRISHISLLPAGEVPVSS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCC TDKVADASTFTSEGFIPVSKPRALHDDEIPALIEDYRKAARNAIAAGFDGVEIHAANTYL CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH IEQFLRDSVNDRSGPYGGSIENRTRLLLEVTRAVAGEIGAGRTGIRLSPMTTFTAPLDSN HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCCC PQALYGYVVEQLAPLGLAYLHVIEGETGGTRTPEGKPFDYAALHRAYPGVWMLNNGYDRD CHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCC LALQTVADGKADLIAFGRPFISTPDLVRRLRDGAPLNELRADKLYGGGAEGYTDYPTLAG EEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTLFDPIQMGDIALANRIVMAPLTRNRAIEGNKPGPLTVEYYRQRATAGLIVAEASPIS CCCCCCHHHCCHHHHCEEEEEECCCCCCCCCCCCCCEEHHHHHHHCCCEEEEECCCCCC PTAQGYLDTPGIWSAEQVVAWQAVTKAVHAEGGKIVLQLWHVGRISHISLLPAGEVPVSS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCC TDKVADASTFTSEGFIPVSKPRALHDDEIPALIEDYRKAARNAIAAGFDGVEIHAANTYL CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH IEQFLRDSVNDRSGPYGGSIENRTRLLLEVTRAVAGEIGAGRTGIRLSPMTTFTAPLDSN HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCCC PQALYGYVVEQLAPLGLAYLHVIEGETGGTRTPEGKPFDYAALHRAYPGVWMLNNGYDRD CHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCC LALQTVADGKADLIAFGRPFISTPDLVRRLRDGAPLNELRADKLYGGGAEGYTDYPTLAG EEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]