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The map label for this gene is yhbY [C]

Identifier: 71906581

GI number: 71906581

Start: 1022849

End: 1023211

Strand: Reverse

Name: yhbY [C]

Synonym: Daro_0942

Alternate gene names: 71906581

Gene position: 1023211-1022849 (Counterclockwise)

Preceding gene: 71906603

Following gene: 71906573

Centisome position: 22.73

GC content: 56.75

Gene sequence:

>363_bases
ATGCTGCAATTATCATCTGCCCAACGCTCTGAACTGCGTGCCCAGGCACATAATCTGAATCCCGTCGTGTCGATTGCCGA
AAACGGCCTCACCGAGGCCGTACTCAAGGAAATCGATCTCAACCTACGGGCCCACCAACTGATCAAGATCCGCGTTTATG
GCGACAGCCGGGAGAATCGGATCGCCTTCTACGAGCAGATTTGCGCCCAATTGGACGCCGCTCCGGTTCAACATATCGGC
AAGCTGCTGGTCGTTTTTCGCCCGGCTCCTATCGAAAAAGCAGCGGCTGAAGCCAAAAAAAGCCAGAACTCGCGCCGCCC
CGCTTCCGAACCACGCAAGACCAAACGCGCCCACCAAGGCTGA

Upstream 100 bases:

>100_bases
TGCGAGCTGAACATAGGTGTCGTTAATATGCTCACGCATCCAAGCTTTACTGGTTCTGGTTCTTTTCATTCGGTAAAATG
CCGTTTTTGAAAGGTTTACT

Downstream 100 bases:

>100_bases
TCACCGCAGCCCGCGACCACTCCAGACGACGAGCCACAGCCCCAGCAAACTCTGCACCAGATAGAGGATGCTGGAAATGC
CGTGCCAGGCGGCAAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRIAFYEQICAQLDAAPVQHIG
KLLVVFRPAPIEKAAAEAKKSQNSRRPASEPRKTKRAHQG

Sequences:

>Translated_120_residues
MLQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRIAFYEQICAQLDAAPVQHIG
KLLVVFRPAPIEKAAAEAKKSQNSRRPASEPRKTKRAHQG
>Mature_120_residues
MLQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRIAFYEQICAQLDAAPVQHIG
KLLVVFRPAPIEKAAAEAKKSQNSRRPASEPRKTKRAHQG

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=88, Percent_Identity=43.1818181818182, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 13386; Mature: 13386

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENR
CCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCH
IAFYEQICAQLDAAPVQHIGKLLVVFRPAPIEKAAAEAKKSQNSRRPASEPRKTKRAHQG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MLQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENR
CCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCH
IAFYEQICAQLDAAPVQHIGKLLVVFRPAPIEKAAAEAKKSQNSRRPASEPRKTKRAHQG
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]