| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is fur [H]
Identifier: 71906573
GI number: 71906573
Start: 1012949
End: 1013392
Strand: Reverse
Name: fur [H]
Synonym: Daro_0934
Alternate gene names: 71906573
Gene position: 1013392-1012949 (Counterclockwise)
Preceding gene: 71906581
Following gene: 71906572
Centisome position: 22.51
GC content: 52.48
Gene sequence:
>444_bases ATGAGCGATCCGCAAAGCCTCAAGAACATGGGGCTGAAAGCCACTTTTCCCCGCCTGAAGATTCTGGAGCTTTTCGAAAA AAGCACCCTGCGTCACATGACGGCGGAAGACGTGTACCGGATGCTGATCAATGAAAACATGGATATCGGGCTGGCCACGG TTTACCGCGTACTGACCCAGTTTGAACAGGCCGGCTTGCTCGAACGTCATTTCTTCGAGTCAGGCAAAGCCGTTTTTGAA ATCAATCACGGCAAGCACCACGACCATCTGGTCTGCATCGACTGCGGCCGTGTTGAAGAATTTTACGATCCTGAAATTGA AAAACGCCAGAATGCCATTGCCAAAGAGCGCGGCTTCGCGATTCAGGATCACGCGCTCTACCTTTATGCCCAATGCACCA AGGCCGAGTGCCAGCACCGCAATAATCCGGACAGCAAGTCCTGA
Upstream 100 bases:
>100_bases GCGCATTCGGGTTTCCGGAGTTTCTCAATCGGCTTTGAAGCGGTATATCATACCCGAAATCAGCATTTTGCCTGCCCGAA CAATTTCTGGAATTTCCACG
Downstream 100 bases:
>100_bases TTCACTGAAACTTCTCCATGTCTGACATTGCTGTTGTTGCCCCGGGGGCTTGGCTATCCTCGGCGGGTGCCACATTCCTG TTGATTGCCCTGGCCGAATT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSDPQSLKNMGLKATFPRLKILELFEKSTLRHMTAEDVYRMLINENMDIGLATVYRVLTQFEQAGLLERHFFESGKAVFE INHGKHHDHLVCIDCGRVEEFYDPEIEKRQNAIAKERGFAIQDHALYLYAQCTKAECQHRNNPDSKS
Sequences:
>Translated_147_residues MSDPQSLKNMGLKATFPRLKILELFEKSTLRHMTAEDVYRMLINENMDIGLATVYRVLTQFEQAGLLERHFFESGKAVFE INHGKHHDHLVCIDCGRVEEFYDPEIEKRQNAIAKERGFAIQDHALYLYAQCTKAECQHRNNPDSKS >Mature_146_residues SDPQSLKNMGLKATFPRLKILELFEKSTLRHMTAEDVYRMLINENMDIGLATVYRVLTQFEQAGLLERHFFESGKAVFEI NHGKHHDHLVCIDCGRVEEFYDPEIEKRQNAIAKERGFAIQDHALYLYAQCTKAECQHRNNPDSKS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=139, Percent_Identity=51.7985611510791, Blast_Score=156, Evalue=6e-40,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17072; Mature: 16940
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPQSLKNMGLKATFPRLKILELFEKSTLRHMTAEDVYRMLINENMDIGLATVYRVLTQ CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FEQAGLLERHFFESGKAVFEINHGKHHDHLVCIDCGRVEEFYDPEIEKRQNAIAKERGFA HHHCCHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCE IQDHALYLYAQCTKAECQHRNNPDSKS EECCEEEEEEECCHHHHHCCCCCCCCC >Mature Secondary Structure SDPQSLKNMGLKATFPRLKILELFEKSTLRHMTAEDVYRMLINENMDIGLATVYRVLTQ CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FEQAGLLERHFFESGKAVFEINHGKHHDHLVCIDCGRVEEFYDPEIEKRQNAIAKERGFA HHHCCHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCE IQDHALYLYAQCTKAECQHRNNPDSKS EECCEEEEEEECCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA