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The map label for this gene is yoaH [H]

Identifier: 71906565

GI number: 71906565

Start: 1004289

End: 1005908

Strand: Reverse

Name: yoaH [H]

Synonym: Daro_0926

Alternate gene names: 71906565

Gene position: 1005908-1004289 (Counterclockwise)

Preceding gene: 71906566

Following gene: 71906563

Centisome position: 22.35

GC content: 60.43

Gene sequence:

>1620_bases
ATGCCGCGCTTTGCCGATTTGAAAATATGGGTGCGCCTCACCGCCGCCATTTGGGTTGTTCTGGCCATCATCTGGGCAGG
CGCCATCGCCTGGACCACCCAGGTTAACCGAGAGACGGCAATCCGTCAGGCCCAGGATTTTTCGAAGAGCATCCACGAAA
TGACCATGGCCGGCCTGACCGGCATGATGATCACCGGCACCGTTGGCCAGCGCGAAGTCTTCCTGGACCAGATCAAGCAG
CTATCGATCATCAAGGATCTGCACGTTGCCCGTAGCGACGCCGTCGTCAAGCTGTTCGGCCCCGACACCAAGAGCCAGCG
CGAGCTCGATGTGCTAGAAAAACAGGTCATGGCCTCCGGCACGCCCTACATGTCGGTTGAATCTGCCAACGGCAGCTCCT
TCCTGCAAGTCATCAACCCGACCAAGGCCTCGAAAAACTATCTTGGCAAGGACTGCATCGCCTGCCACCAAGTCCCTGAA
GGCACGGTGCTCGGCGTCGTCAGCATGAAGGTCTCGCTTGACTCGGTCGAAGCCGAGGTTTCAGCCTTTCGCGTGAAAAT
CGCCGGCGTCGCGCTAGGCGCGCTGGGTGCGCTGTTGCTCATCATCTATCTGATTACCCATCATTTTGTGACCCGACCGC
TCGACGAACTCCGCAAGGGTCTCAGCGACATCGCCCGTGGCGAAGGCGACCTGACCCGTCGCCTGCCGATCAAGGGGCGC
GATGAGGTCGGGCAATCGGCGCTTGTTTTCAACGAGATGATGGAAAACTTCAATCAACTGGTTCGCCAGGTCCGCGACTC
GGCCAGCCAGGTTTCCTCACGAGTGGCGGCATTGTCGGAAAGTGCCGACCGTGTCACGCAAAGCTCGCATCAGCAGAACG
AAAGATCAAACCATGCCGCCACTGCGGTCGAGCAACTGGTTTCGAGTATTTCGTCGATTGCCCAGAGCGCCGAGCATGTC
CAGCACCAGTCTCAGGAAAGCCTGGCCCGTGCCAACGAGGGTAGCCGCAACCTGAACGTGTTGCTCAACGAGATGACGGT
CGTCGAAAGTGCCGTCAAGGAAATGGCCGAGTCGGTCAACAACTTCGTCCGCAATACCGAATCGATCACGCTGATGACGC
GCGAGGTCAAGGATATTGCCGAGCAGACCAATCTGCTGGCCCTGAATGCTGCCATTGAAGCAGCCCGAGCTGGCGAGCAG
GGGCGCGGGTTTGCGGTGGTGGCCGATGAAGTACGCAAGCTGGCCGAAAAGTCCTCCCGTTCAGCCAGCGAAATCGATGC
CATCACGGCCAACCTCAGCGCCCAGTCGGTCGCCGTCCGGCGCAGCATCGAAGAGGGGCTGGAACATCTGGAGTCCAGCC
AGTCGGCCGTCGCCTCGGTCTCCAACATCCTGCAGGCAACGAACGGCTCGGTCACCGAAGTCGGCCATGGACTGGACGCC
ATCGCCACGGCCACCGATCAACAGCGTCGCTTCTCGGGCGATGTCGAGCACAGCATTGAAGCCATCGCCGGCATGGCCCG
CGAAAACTCCGGCACGGTTGAACAGACCGCTGGCGCGGCGCACGACCTGAAGCGACTGGCCGAAGGACTGGCCAGCCTGG
TTGGCCGCTTCAAGGTCTAA

Upstream 100 bases:

>100_bases
CTTCTGGAATACTTTTGCAGGAGAGCGGCGCGGCTGGCACAATTCAACAAATCGACCTGACCGCTTGACAACAAGAGCGG
CAGTTACTTGAGGGAATTTC

Downstream 100 bases:

>100_bases
ATCAGGAAATCGACTTCAATAAAACCGCCTCTTCGGAGGCGGTTTTCACATGGGTGACAGTGAGAGGTCCATGCCGCCGC
CCGAACGCGACCCGCCGGTC

Product: histidine kinase, HAMP region: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MPRFADLKIWVRLTAAIWVVLAIIWAGAIAWTTQVNRETAIRQAQDFSKSIHEMTMAGLTGMMITGTVGQREVFLDQIKQ
LSIIKDLHVARSDAVVKLFGPDTKSQRELDVLEKQVMASGTPYMSVESANGSSFLQVINPTKASKNYLGKDCIACHQVPE
GTVLGVVSMKVSLDSVEAEVSAFRVKIAGVALGALGALLLIIYLITHHFVTRPLDELRKGLSDIARGEGDLTRRLPIKGR
DEVGQSALVFNEMMENFNQLVRQVRDSASQVSSRVAALSESADRVTQSSHQQNERSNHAATAVEQLVSSISSIAQSAEHV
QHQSQESLARANEGSRNLNVLLNEMTVVESAVKEMAESVNNFVRNTESITLMTREVKDIAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRKLAEKSSRSASEIDAITANLSAQSVAVRRSIEEGLEHLESSQSAVASVSNILQATNGSVTEVGHGLDA
IATATDQQRRFSGDVEHSIEAIAGMARENSGTVEQTAGAAHDLKRLAEGLASLVGRFKV

Sequences:

>Translated_539_residues
MPRFADLKIWVRLTAAIWVVLAIIWAGAIAWTTQVNRETAIRQAQDFSKSIHEMTMAGLTGMMITGTVGQREVFLDQIKQ
LSIIKDLHVARSDAVVKLFGPDTKSQRELDVLEKQVMASGTPYMSVESANGSSFLQVINPTKASKNYLGKDCIACHQVPE
GTVLGVVSMKVSLDSVEAEVSAFRVKIAGVALGALGALLLIIYLITHHFVTRPLDELRKGLSDIARGEGDLTRRLPIKGR
DEVGQSALVFNEMMENFNQLVRQVRDSASQVSSRVAALSESADRVTQSSHQQNERSNHAATAVEQLVSSISSIAQSAEHV
QHQSQESLARANEGSRNLNVLLNEMTVVESAVKEMAESVNNFVRNTESITLMTREVKDIAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRKLAEKSSRSASEIDAITANLSAQSVAVRRSIEEGLEHLESSQSAVASVSNILQATNGSVTEVGHGLDA
IATATDQQRRFSGDVEHSIEAIAGMARENSGTVEQTAGAAHDLKRLAEGLASLVGRFKV
>Mature_538_residues
PRFADLKIWVRLTAAIWVVLAIIWAGAIAWTTQVNRETAIRQAQDFSKSIHEMTMAGLTGMMITGTVGQREVFLDQIKQL
SIIKDLHVARSDAVVKLFGPDTKSQRELDVLEKQVMASGTPYMSVESANGSSFLQVINPTKASKNYLGKDCIACHQVPEG
TVLGVVSMKVSLDSVEAEVSAFRVKIAGVALGALGALLLIIYLITHHFVTRPLDELRKGLSDIARGEGDLTRRLPIKGRD
EVGQSALVFNEMMENFNQLVRQVRDSASQVSSRVAALSESADRVTQSSHQQNERSNHAATAVEQLVSSISSIAQSAEHVQ
HQSQESLARANEGSRNLNVLLNEMTVVESAVKEMAESVNNFVRNTESITLMTREVKDIAEQTNLLALNAAIEAARAGEQG
RGFAVVADEVRKLAEKSSRSASEIDAITANLSAQSVAVRRSIEEGLEHLESSQSAVASVSNILQATNGSVTEVGHGLDAI
ATATDQQRRFSGDVEHSIEAIAGMARENSGTVEQTAGAAHDLKRLAEGLASLVGRFKV

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=368, Percent_Identity=28.5326086956522, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI2367378, Length=304, Percent_Identity=28.9473684210526, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788194, Length=334, Percent_Identity=27.5449101796407, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788195, Length=288, Percent_Identity=30.5555555555556, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789453, Length=301, Percent_Identity=29.5681063122924, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58144; Mature: 58012

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFADLKIWVRLTAAIWVVLAIIWAGAIAWTTQVNRETAIRQAQDFSKSIHEMTMAGLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMMITGTVGQREVFLDQIKQLSIIKDLHVARSDAVVKLFGPDTKSQRELDVLEKQVMASG
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
TPYMSVESANGSSFLQVINPTKASKNYLGKDCIACHQVPEGTVLGVVSMKVSLDSVEAEV
CCCEEEECCCCCCHHEEECCCHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEHHHHHHHHH
SAFRVKIAGVALGALGALLLIIYLITHHFVTRPLDELRKGLSDIARGEGDLTRRLPIKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECCCCCCC
DEVGQSALVFNEMMENFNQLVRQVRDSASQVSSRVAALSESADRVTQSSHQQNERSNHAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVEQLVSSISSIAQSAEHVQHQSQESLARANEGSRNLNVLLNEMTVVESAVKEMAESVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NFVRNTESITLMTREVKDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSSR
HHHHCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC
SASEIDAITANLSAQSVAVRRSIEEGLEHLESSQSAVASVSNILQATNGSVTEVGHGLDA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH
IATATDQQRRFSGDVEHSIEAIAGMARENSGTVEQTAGAAHDLKRLAEGLASLVGRFKV
HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRFADLKIWVRLTAAIWVVLAIIWAGAIAWTTQVNRETAIRQAQDFSKSIHEMTMAGLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMMITGTVGQREVFLDQIKQLSIIKDLHVARSDAVVKLFGPDTKSQRELDVLEKQVMASG
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
TPYMSVESANGSSFLQVINPTKASKNYLGKDCIACHQVPEGTVLGVVSMKVSLDSVEAEV
CCCEEEECCCCCCHHEEECCCHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEHHHHHHHHH
SAFRVKIAGVALGALGALLLIIYLITHHFVTRPLDELRKGLSDIARGEGDLTRRLPIKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECCCCCCC
DEVGQSALVFNEMMENFNQLVRQVRDSASQVSSRVAALSESADRVTQSSHQQNERSNHAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVEQLVSSISSIAQSAEHVQHQSQESLARANEGSRNLNVLLNEMTVVESAVKEMAESVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NFVRNTESITLMTREVKDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAEKSSR
HHHHCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC
SASEIDAITANLSAQSVAVRRSIEEGLEHLESSQSAVASVSNILQATNGSVTEVGHGLDA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH
IATATDQQRRFSGDVEHSIEAIAGMARENSGTVEQTAGAAHDLKRLAEGLASLVGRFKV
HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]