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The map label for this gene is ybhB [C]

Identifier: 71906346

GI number: 71906346

Start: 775780

End: 776409

Strand: Reverse

Name: ybhB [C]

Synonym: Daro_0707

Alternate gene names: 71906346

Gene position: 776409-775780 (Counterclockwise)

Preceding gene: 71906347

Following gene: 71906342

Centisome position: 17.25

GC content: 59.21

Gene sequence:

>630_bases
ATGAAATTGACCAGTGGCAGTTTTGCCGACGGACAAACAATCCCGGGGGATTACTCCTTCTGCATTCCGGACCCGGCTCA
TCACGTCTGCCTGGGAAGCAACAAGAATCCCCAGCTATCCTGGAGCGACGTTCCGGCCGGGACCAAATCATTTGCTGTCA
TCTGCCATGATCCGGATGTTCCCAGCCAGGGAGACGACGTTAATCAGGAGGGGCGAAGCGTCCCTGCTTCTTTGCCGCGT
GTCGACTTTTTCCACTGGGTTCTGATTGATCTGCCTGCCTCGATCACCAGCCTGAAAGAAGGCGAATTCAGCGGCGAAGT
CACACCGCGTGGCAAGCCGGGGCCACAGGCCGCTTACGGCGCCCGCCAGGGCATCAACAACTACACGGACTGGTTTGCCG
GCGACAACGACATGCGGGGCGACTACTACGGCTACGACGGCCCGTGCCCGCCCTGGAACGATGAAATCATCCATCGCTAC
GTTTTCACGGTCTATGCGCTGGATATCGAGCAATTGCCGCTTGCCGGCAAATTTGGCGGCCCGGAAGCCCGCGCCGCCAT
TCAGGGGCACATCCTGGCCGAAGCCTGCCTGATCGGAACCTATACCCTGAACCGCAAGCTGCTGGGTTAA

Upstream 100 bases:

>100_bases
ACCACTTGGCGCCATCGTCTATTTCGCTACACTATGGATTCTTGGCTTCCGCCTCGGCGACTTCAAGCGCCGCACAGCCC
CATAATCAGGAGAGACTACG

Downstream 100 bases:

>100_bases
ACCCGGCTAGCAGCAAAAAGGCCATGCTCGGTAGCATGGCCTTTTTATTTGTCCAGTCACCGGTCTTTAGCCGGCCGGAA
GCTCGGATTAGCGAATTAGC

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLTSGSFADGQTIPGDYSFCIPDPAHHVCLGSNKNPQLSWSDVPAGTKSFAVICHDPDVPSQGDDVNQEGRSVPASLPR
VDFFHWVLIDLPASITSLKEGEFSGEVTPRGKPGPQAAYGARQGINNYTDWFAGDNDMRGDYYGYDGPCPPWNDEIIHRY
VFTVYALDIEQLPLAGKFGGPEARAAIQGHILAEACLIGTYTLNRKLLG

Sequences:

>Translated_209_residues
MKLTSGSFADGQTIPGDYSFCIPDPAHHVCLGSNKNPQLSWSDVPAGTKSFAVICHDPDVPSQGDDVNQEGRSVPASLPR
VDFFHWVLIDLPASITSLKEGEFSGEVTPRGKPGPQAAYGARQGINNYTDWFAGDNDMRGDYYGYDGPCPPWNDEIIHRY
VFTVYALDIEQLPLAGKFGGPEARAAIQGHILAEACLIGTYTLNRKLLG
>Mature_209_residues
MKLTSGSFADGQTIPGDYSFCIPDPAHHVCLGSNKNPQLSWSDVPAGTKSFAVICHDPDVPSQGDDVNQEGRSVPASLPR
VDFFHWVLIDLPASITSLKEGEFSGEVTPRGKPGPQAAYGARQGINNYTDWFAGDNDMRGDYYGYDGPCPPWNDEIIHRY
VFTVYALDIEQLPLAGKFGGPEARAAIQGHILAEACLIGTYTLNRKLLG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=203, Percent_Identity=31.5270935960591, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786757, Length=204, Percent_Identity=27.4509803921569, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22687; Mature: 22687

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSGSFADGQTIPGDYSFCIPDPAHHVCLGSNKNPQLSWSDVPAGTKSFAVICHDPDV
CCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEECCCCC
PSQGDDVNQEGRSVPASLPRVDFFHWVLIDLPASITSLKEGEFSGEVTPRGKPGPQAAYG
CCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHH
ARQGINNYTDWFAGDNDMRGDYYGYDGPCPPWNDEIIHRYVFTVYALDIEQLPLAGKFGG
HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECHHHCCCCCCCCC
PEARAAIQGHILAEACLIGTYTLNRKLLG
CHHHHHHHHHHHHHHHHHEEEECCEECCC
>Mature Secondary Structure
MKLTSGSFADGQTIPGDYSFCIPDPAHHVCLGSNKNPQLSWSDVPAGTKSFAVICHDPDV
CCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEECCCCC
PSQGDDVNQEGRSVPASLPRVDFFHWVLIDLPASITSLKEGEFSGEVTPRGKPGPQAAYG
CCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHH
ARQGINNYTDWFAGDNDMRGDYYGYDGPCPPWNDEIIHRYVFTVYALDIEQLPLAGKFGG
HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECHHHCCCCCCCCC
PEARAAIQGHILAEACLIGTYTLNRKLLG
CHHHHHHHHHHHHHHHHHEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]