| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is mviN [H]
Identifier: 71906347
GI number: 71906347
Start: 776425
End: 777975
Strand: Reverse
Name: mviN [H]
Synonym: Daro_0708
Alternate gene names: 71906347
Gene position: 777975-776425 (Counterclockwise)
Preceding gene: 71906348
Following gene: 71906346
Centisome position: 17.28
GC content: 60.28
Gene sequence:
>1551_bases ATGAATCTGCTTCGCGCGCTGGCCACAGTCAGCGGAATGACCCTTCTGTCGAGAATCCTCGGTTTCGTTCGGGATTTTGT CATTGCTCGCGCCTTTGGCGCAGGACTGGCCACAGACGCTTTTTTTGTCGCCTTCAAACTGCCCAACCTGCTGCGGCGGA TGTTTGCCGAAGGGGCTTTTTCCCAGGCATTCGTACCCATCCTGGGCGAATACAAGAACAAGCGCAGTGAAGAAGACACC CGCACACTGGTCGATCACGTCGCCAGCCTGCTGTCGATCATCCTGTTTGCCGTAACTGCCATCGGCATTGCCGCGGCGCC GCTGCTGGTCTGGATCTCCGCTCCGGGTTTTGCCGCAGATGCCGGCAAGTTCGAACTGACAATCACGCTGACCCGCATCG CCTTCCCTTATATATTCTTCATGTCGCTGGTCGCCCTGGCCGGCGGTTTGCTGAACAGCTGGAGCCGCTTCGCGCTGCCG GCCTTTACCCCGGTCCTGCTCAACCTGTCCTTTATCGGCATGGCCTTGTTTGCCGCACCATATTTCGACCCGCCGGTATT GGCACTGGGCTGGGCCGTTTTTCTCGGCGGCCTGTTGCAACTGGCGATCCAGATTCCCGCACTGAAGAAAATTTCGATGC TGCCCCGCCCCTCCCTGAATTGGCGGGCTGCCTGGGCTGACCCCGGGGTGCGCCGGATATTGACGCTGATGGGCCCGGCC GTGGTCGGCGTTTCGGTTTCCCAGGTCAGCTTGCTGATCAACACGATTTTTGCCTCTTTTCTGAAGACCGGCAGCGTTTC CTGGCTCTACTATGCAGACCGTCTGATGGAGTTTCCGTCGGGCATGCTGGGTGCCGCACTGGGCACCATCCTGCTGCCAT CGCTGTCGCGTTATCACGCCAGCAACGAACATATCGAATACTCCCGCCTACTCGACTGGGGCTTGCGACTGACCTTGCTG CTCGCCGCGCCGGCAGCGCTCGGACTGGCAATTCTGGCCGTCCCCCTGATCGCCACGCTGTTTTTCCATGGCGCCTTTTC GCCAGACGATGTCTTCCGTACCCGCGAGGCGCTGGTCGCCTACACCGTCGGCCTGACCGGCATGATTCTGGTCAAGGTGC TGGCTCCTGGCTTCTATGCCCGGCAGAACGTGCGAACGCCAGTTCGCATCGCCCTGATCTCGCTGACCGCGACCCAACTG ATGAACCTCGCCTTCATTGGCTGGATCGGCCATGCCGGCCTGGCCCTGTCGATCGGGCTGGCGGCGTGCCTGAATGCATT CATGCTCTATCGCGGCCTGCGCCGGCTCGACATCTACGAACCACAGGCTGGCTGGGGCAGTTTTGTGGCGAAACTGGGCG TGGCGCTGGTCGCCATGGGCGGTGTCCTGTGGTTCGGGATGGGTAGGGAAAACAGCTGGCTGCAACTCAGTTTCATCGAC CGGATAATTCACCTTGCATGGCTTGTACCACTTGGCGCCATCGTCTATTTCGCTACACTATGGATTCTTGGCTTCCGCCT CGGCGACTTCAAGCGCCGCACAGCCCCATAA
Upstream 100 bases:
>100_bases GCTGAAAAGCCGGACAGCATTTGACTTTCGCTGTTTCCGTGGAAAGCAGAGCGTAGAATTGGCGCTTTTTTCAAACCATT TCAGGCAACGCCAAGACCCA
Downstream 100 bases:
>100_bases TCAGGAGAGACTACGATGAAATTGACCAGTGGCAGTTTTGCCGACGGACAAACAATCCCGGGGGATTACTCCTTCTGCAT TCCGGACCCGGCTCATCACG
Product: virulence factor MVIN-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNLLRALATVSGMTLLSRILGFVRDFVIARAFGAGLATDAFFVAFKLPNLLRRMFAEGAFSQAFVPILGEYKNKRSEEDT RTLVDHVASLLSIILFAVTAIGIAAAPLLVWISAPGFAADAGKFELTITLTRIAFPYIFFMSLVALAGGLLNSWSRFALP AFTPVLLNLSFIGMALFAAPYFDPPVLALGWAVFLGGLLQLAIQIPALKKISMLPRPSLNWRAAWADPGVRRILTLMGPA VVGVSVSQVSLLINTIFASFLKTGSVSWLYYADRLMEFPSGMLGAALGTILLPSLSRYHASNEHIEYSRLLDWGLRLTLL LAAPAALGLAILAVPLIATLFFHGAFSPDDVFRTREALVAYTVGLTGMILVKVLAPGFYARQNVRTPVRIALISLTATQL MNLAFIGWIGHAGLALSIGLAACLNAFMLYRGLRRLDIYEPQAGWGSFVAKLGVALVAMGGVLWFGMGRENSWLQLSFID RIIHLAWLVPLGAIVYFATLWILGFRLGDFKRRTAP
Sequences:
>Translated_516_residues MNLLRALATVSGMTLLSRILGFVRDFVIARAFGAGLATDAFFVAFKLPNLLRRMFAEGAFSQAFVPILGEYKNKRSEEDT RTLVDHVASLLSIILFAVTAIGIAAAPLLVWISAPGFAADAGKFELTITLTRIAFPYIFFMSLVALAGGLLNSWSRFALP AFTPVLLNLSFIGMALFAAPYFDPPVLALGWAVFLGGLLQLAIQIPALKKISMLPRPSLNWRAAWADPGVRRILTLMGPA VVGVSVSQVSLLINTIFASFLKTGSVSWLYYADRLMEFPSGMLGAALGTILLPSLSRYHASNEHIEYSRLLDWGLRLTLL LAAPAALGLAILAVPLIATLFFHGAFSPDDVFRTREALVAYTVGLTGMILVKVLAPGFYARQNVRTPVRIALISLTATQL MNLAFIGWIGHAGLALSIGLAACLNAFMLYRGLRRLDIYEPQAGWGSFVAKLGVALVAMGGVLWFGMGRENSWLQLSFID RIIHLAWLVPLGAIVYFATLWILGFRLGDFKRRTAP >Mature_516_residues MNLLRALATVSGMTLLSRILGFVRDFVIARAFGAGLATDAFFVAFKLPNLLRRMFAEGAFSQAFVPILGEYKNKRSEEDT RTLVDHVASLLSIILFAVTAIGIAAAPLLVWISAPGFAADAGKFELTITLTRIAFPYIFFMSLVALAGGLLNSWSRFALP AFTPVLLNLSFIGMALFAAPYFDPPVLALGWAVFLGGLLQLAIQIPALKKISMLPRPSLNWRAAWADPGVRRILTLMGPA VVGVSVSQVSLLINTIFASFLKTGSVSWLYYADRLMEFPSGMLGAALGTILLPSLSRYHASNEHIEYSRLLDWGLRLTLL LAAPAALGLAILAVPLIATLFFHGAFSPDDVFRTREALVAYTVGLTGMILVKVLAPGFYARQNVRTPVRIALISLTATQL MNLAFIGWIGHAGLALSIGLAACLNAFMLYRGLRRLDIYEPQAGWGSFVAKLGVALVAMGGVLWFGMGRENSWLQLSFID RIIHLAWLVPLGAIVYFATLWILGFRLGDFKRRTAP
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=514, Percent_Identity=59.5330739299611, Blast_Score=591, Evalue=1e-170,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56114; Mature: 56114
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLRALATVSGMTLLSRILGFVRDFVIARAFGAGLATDAFFVAFKLPNLLRRMFAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILGEYKNKRSEEDTRTLVDHVASLLSIILFAVTAIGIAAAPLLVWISAPGFAAD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC AGKFELTITLTRIAFPYIFFMSLVALAGGLLNSWSRFALPAFTPVLLNLSFIGMALFAAP CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YFDPPVLALGWAVFLGGLLQLAIQIPALKKISMLPRPSLNWRAAWADPGVRRILTLMGPA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHH VVGVSVSQVSLLINTIFASFLKTGSVSWLYYADRLMEFPSGMLGAALGTILLPSLSRYHA HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC SNEHIEYSRLLDWGLRLTLLLAAPAALGLAILAVPLIATLFFHGAFSPDDVFRTREALVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTVGLTGMILVKVLAPGFYARQNVRTPVRIALISLTATQLMNLAFIGWIGHAGLALSIGL HHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACLNAFMLYRGLRRLDIYEPQAGWGSFVAKLGVALVAMGGVLWFGMGRENSWLQLSFID HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHHHH RIIHLAWLVPLGAIVYFATLWILGFRLGDFKRRTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MNLLRALATVSGMTLLSRILGFVRDFVIARAFGAGLATDAFFVAFKLPNLLRRMFAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH SQAFVPILGEYKNKRSEEDTRTLVDHVASLLSIILFAVTAIGIAAAPLLVWISAPGFAAD HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC AGKFELTITLTRIAFPYIFFMSLVALAGGLLNSWSRFALPAFTPVLLNLSFIGMALFAAP CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YFDPPVLALGWAVFLGGLLQLAIQIPALKKISMLPRPSLNWRAAWADPGVRRILTLMGPA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHH VVGVSVSQVSLLINTIFASFLKTGSVSWLYYADRLMEFPSGMLGAALGTILLPSLSRYHA HHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC SNEHIEYSRLLDWGLRLTLLLAAPAALGLAILAVPLIATLFFHGAFSPDDVFRTREALVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTVGLTGMILVKVLAPGFYARQNVRTPVRIALISLTATQLMNLAFIGWIGHAGLALSIGL HHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACLNAFMLYRGLRRLDIYEPQAGWGSFVAKLGVALVAMGGVLWFGMGRENSWLQLSFID HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEHHHHH RIIHLAWLVPLGAIVYFATLWILGFRLGDFKRRTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]