| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is argB
Identifier: 71906269
GI number: 71906269
Start: 693561
End: 694448
Strand: Reverse
Name: argB
Synonym: Daro_0629
Alternate gene names: 71906269
Gene position: 694448-693561 (Counterclockwise)
Preceding gene: 71906270
Following gene: 71906268
Centisome position: 15.43
GC content: 58.78
Gene sequence:
>888_bases ATGAGCATTGAAGACCTTTCCCCCGGCACCAAGGCCGCCGTTCTGGCCGAAGCCCTCCCCTACATCAAGCGTTTCCACGG CAAGACCATCGTTGTCAAATACGGCGGCAACGCGATGACCGACGAGCATCTGAAAAGCTGTTTTGCCCGCGATGTCGTGC TGCTTGAACTGGTCGGCTTCAACATTGTTGTCGTTCATGGCGGCGGCCCCCAGATCGAAAGCCTGCTTGCCCGTGTCGGC AAGAAGGGGGAATTCATCCAAGGCATGCGCGTCACCGATGCCGAGACCATGGAAGTTGTCGAAATGGTCTTGGGCGGGCA GGTCAACAAGGACATCGTCAATCTGATCAACCAGCACGGTGGCAAGGCCGTCGGCCTGACCGGCAAGGATGGCAATTTCA TCCGCGCCAAGAAGTTGATGCTGGAGGACAAGGACAACCCGGGTGACCTGATCGACGTGGGCCAGGTCGGCGAGATCGTC TCCATTGATCCGACACTGATCGACCACCTCGACAAGGGGGCCTTCATCCCCGTGATCGCCCCGATCGGGGTCGGCAAGGA TGGCGAGACCTACAATATCAACGCCGACGTCGTCGCTGGCAAGATCGCCGAAGTCCTCAAGGCCGAGAAGCTGGTCCTGC TGACCAACACGCCGGGCGTACTCGACAAGAATGGCGATCTGATTACCGGCATCACGCCCAAGCAGATCGACGAAATGGTC GATGATGGCACACTGTCCGGCGGCATGCTGCCCAAAATCGGCTCCGCGCTTGATGCCGCCCGCAACGGCGTCAAAGGGGT TCACATCATTGATGGCCGTGTCGAGCATGCGCTACTCCTGGAAATTCTGACCGACCATGGCGTCGGCACAATGATCAAAT CGCACTGA
Upstream 100 bases:
>100_bases CTGAATATCGAGTAAGCCAAGCGATTCCAAGCATCAAGGCCGGACCCCGTTCCGGCCTTTTTCTTTGTACAATCCGCGGC GATTCTACTTGGAGCCCGCC
Downstream 100 bases:
>100_bases CATCGGCACCAGGAATGAAAAGCCCGCAACTGCGGGCTTTTTCAATTGCACTTAGAGTATCGCGATGAAGAAACCTGTCT GGCTATTCGACCTCGACAAT
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSIEDLSPGTKAAVLAEALPYIKRFHGKTIVVKYGGNAMTDEHLKSCFARDVVLLELVGFNIVVVHGGGPQIESLLARVG KKGEFIQGMRVTDAETMEVVEMVLGGQVNKDIVNLINQHGGKAVGLTGKDGNFIRAKKLMLEDKDNPGDLIDVGQVGEIV SIDPTLIDHLDKGAFIPVIAPIGVGKDGETYNINADVVAGKIAEVLKAEKLVLLTNTPGVLDKNGDLITGITPKQIDEMV DDGTLSGGMLPKIGSALDAARNGVKGVHIIDGRVEHALLLEILTDHGVGTMIKSH
Sequences:
>Translated_295_residues MSIEDLSPGTKAAVLAEALPYIKRFHGKTIVVKYGGNAMTDEHLKSCFARDVVLLELVGFNIVVVHGGGPQIESLLARVG KKGEFIQGMRVTDAETMEVVEMVLGGQVNKDIVNLINQHGGKAVGLTGKDGNFIRAKKLMLEDKDNPGDLIDVGQVGEIV SIDPTLIDHLDKGAFIPVIAPIGVGKDGETYNINADVVAGKIAEVLKAEKLVLLTNTPGVLDKNGDLITGITPKQIDEMV DDGTLSGGMLPKIGSALDAARNGVKGVHIIDGRVEHALLLEILTDHGVGTMIKSH >Mature_294_residues SIEDLSPGTKAAVLAEALPYIKRFHGKTIVVKYGGNAMTDEHLKSCFARDVVLLELVGFNIVVVHGGGPQIESLLARVGK KGEFIQGMRVTDAETMEVVEMVLGGQVNKDIVNLINQHGGKAVGLTGKDGNFIRAKKLMLEDKDNPGDLIDVGQVGEIVS IDPTLIDHLDKGAFIPVIAPIGVGKDGETYNINADVVAGKIAEVLKAEKLVLLTNTPGVLDKNGDLITGITPKQIDEMVD DGTLSGGMLPKIGSALDAARNGVKGVHIIDGRVEHALLLEILTDHGVGTMIKSH
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=283, Percent_Identity=30.3886925795053, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI145693208, Length=245, Percent_Identity=31.0204081632653, Blast_Score=102, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320913, Length=294, Percent_Identity=30.6122448979592, Blast_Score=86, Evalue=8e-18,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_DECAR (Q47IE5)
Other databases:
- EMBL: CP000089 - RefSeq: YP_283856.1 - HSSP: Q9HTN2 - ProteinModelPortal: Q47IE5 - SMR: Q47IE5 - STRING: Q47IE5 - GeneID: 3568896 - GenomeReviews: CP000089_GR - KEGG: dar:Daro_0629 - NMPDR: fig|159087.4.peg.518 - eggNOG: COG0548 - HOGENOM: HBG497643 - OMA: MDIVEMV - ProtClustDB: PRK00942 - BioCyc: DARO159087:DARO_0629-MONOMER - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - InterPro: IPR001057 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - PRINTS: PR00474 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 31214; Mature: 31083
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: BINDING 90-90 BINDING 192-192
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEDLSPGTKAAVLAEALPYIKRFHGKTIVVKYGGNAMTDEHLKSCFARDVVLLELVGF CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECC NIVVVHGGGPQIESLLARVGKKGEFIQGMRVTDAETMEVVEMVLGGQVNKDIVNLINQHG EEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC GKAVGLTGKDGNFIRAKKLMLEDKDNPGDLIDVGQVGEIVSIDPTLIDHLDKGAFIPVIA CEEEEEECCCCCEEEEEHHHCCCCCCCCCEEECCCCCCEEECCHHHHHHCCCCCEEEEEE PIGVGKDGETYNINADVVAGKIAEVLKAEKLVLLTNTPGVLDKNGDLITGITPKQIDEMV ECCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCEEECCCHHHHHHHH DDGTLSGGMLPKIGSALDAARNGVKGVHIIDGRVEHALLLEILTDHGVGTMIKSH CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIEDLSPGTKAAVLAEALPYIKRFHGKTIVVKYGGNAMTDEHLKSCFARDVVLLELVGF CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECC NIVVVHGGGPQIESLLARVGKKGEFIQGMRVTDAETMEVVEMVLGGQVNKDIVNLINQHG EEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC GKAVGLTGKDGNFIRAKKLMLEDKDNPGDLIDVGQVGEIVSIDPTLIDHLDKGAFIPVIA CEEEEEECCCCCEEEEEHHHCCCCCCCCCEEECCCCCCEEECCHHHHHHCCCCCEEEEEE PIGVGKDGETYNINADVVAGKIAEVLKAEKLVLLTNTPGVLDKNGDLITGITPKQIDEMV ECCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCEEECCCHHHHHHHH DDGTLSGGMLPKIGSALDAARNGVKGVHIIDGRVEHALLLEILTDHGVGTMIKSH CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA