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The map label for this gene is yniC [C]

Identifier: 71906268

GI number: 71906268

Start: 692858

End: 693496

Strand: Reverse

Name: yniC [C]

Synonym: Daro_0628

Alternate gene names: 71906268

Gene position: 693496-692858 (Counterclockwise)

Preceding gene: 71906269

Following gene: 71906267

Centisome position: 15.41

GC content: 52.27

Gene sequence:

>639_bases
ATGAAGAAACCTGTCTGGCTATTCGACCTCGACAATACGCTGCACAACGCAACGCCGCATATCTTCCCGCATATCAACCG
TTCGATGCGCGAATACATCGAGCGGCATCTGGGCGTAGACGAGCACGAGGCGACGCGTATCCGGCAAGATTACTGGGATC
GCTACGGCGCCACCCTGCTCGGACTGATGCGGCACCACGACACCGACCCGAATCACTTTCTCCGGGAAACCCATCAGTTC
ACCAATCTGAAGCAGATGGTCGTATTCGAGAAGCCACTGATTCATATGCTGAATCGCCTCCCTGGTCGGAAGATCATATT
TTCGAATGCACCGAGGCATTATACGGAAGCGATTCTCGCCATCACTGGACTAAAACCCTGCTTTGACGCCATATATTCGG
TAGAGAACCTCCATTTTCAGCCGAAGCCAATGCTGGCCGGATTCCGTGCATTACTAAAGGCGGAACACCTCAATCCGCGC
AACTGCATCATGGTCGAAGACAGCCTGGCCAATCTGGTCAGCGCCAAGAAACTCGGCATGAAAACCGTGTGGGTAAGCAC
TGGCTTACGTCAATCGCCCTTTGTAGACGTCAAAATTAGCTCTGCCCTACAGTTATCAAAACGCTGTAGCCGATTATAA

Upstream 100 bases:

>100_bases
GACCATGGCGTCGGCACAATGATCAAATCGCACTGACATCGGCACCAGGAATGAAAAGCCCGCAACTGCGGGCTTTTTCA
ATTGCACTTAGAGTATCGCG

Downstream 100 bases:

>100_bases
TTTTCGGGCAAAAACCAATAATCACAGAGGGGATATTCATGGCGAAAAAACCGGGCGAACGCCGCCTGCAAATCCTGCAG
ACGCTGGCGGAAATGCTGGA

Product: HAD family pyrimidine 5-nucleotidase

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKPVWLFDLDNTLHNATPHIFPHINRSMREYIERHLGVDEHEATRIRQDYWDRYGATLLGLMRHHDTDPNHFLRETHQF
TNLKQMVVFEKPLIHMLNRLPGRKIIFSNAPRHYTEAILAITGLKPCFDAIYSVENLHFQPKPMLAGFRALLKAEHLNPR
NCIMVEDSLANLVSAKKLGMKTVWVSTGLRQSPFVDVKISSALQLSKRCSRL

Sequences:

>Translated_212_residues
MKKPVWLFDLDNTLHNATPHIFPHINRSMREYIERHLGVDEHEATRIRQDYWDRYGATLLGLMRHHDTDPNHFLRETHQF
TNLKQMVVFEKPLIHMLNRLPGRKIIFSNAPRHYTEAILAITGLKPCFDAIYSVENLHFQPKPMLAGFRALLKAEHLNPR
NCIMVEDSLANLVSAKKLGMKTVWVSTGLRQSPFVDVKISSALQLSKRCSRL
>Mature_212_residues
MKKPVWLFDLDNTLHNATPHIFPHINRSMREYIERHLGVDEHEATRIRQDYWDRYGATLLGLMRHHDTDPNHFLRETHQF
TNLKQMVVFEKPLIHMLNRLPGRKIIFSNAPRHYTEAILAITGLKPCFDAIYSVENLHFQPKPMLAGFRALLKAEHLNPR
NCIMVEDSLANLVSAKKLGMKTVWVSTGLRQSPFVDVKISSALQLSKRCSRL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321214, Length=224, Percent_Identity=27.2321428571429, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24644; Mature: 24644

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPVWLFDLDNTLHNATPHIFPHINRSMREYIERHLGVDEHEATRIRQDYWDRYGATLL
CCCCEEEEECCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GLMRHHDTDPNHFLRETHQFTNLKQMVVFEKPLIHMLNRLPGRKIIFSNAPRHYTEAILA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
ITGLKPCFDAIYSVENLHFQPKPMLAGFRALLKAEHLNPRNCIMVEDSLANLVSAKKLGM
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCC
KTVWVSTGLRQSPFVDVKISSALQLSKRCSRL
HHEEECCCCCCCCEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKPVWLFDLDNTLHNATPHIFPHINRSMREYIERHLGVDEHEATRIRQDYWDRYGATLL
CCCCEEEEECCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
GLMRHHDTDPNHFLRETHQFTNLKQMVVFEKPLIHMLNRLPGRKIIFSNAPRHYTEAILA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
ITGLKPCFDAIYSVENLHFQPKPMLAGFRALLKAEHLNPRNCIMVEDSLANLVSAKKLGM
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCC
KTVWVSTGLRQSPFVDVKISSALQLSKRCSRL
HHEEECCCCCCCCEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA