| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is jgt [H]
Identifier: 71906223
GI number: 71906223
Start: 652882
End: 654855
Strand: Reverse
Name: jgt [H]
Synonym: Daro_0583
Alternate gene names: 71906223
Gene position: 654855-652882 (Counterclockwise)
Preceding gene: 71906224
Following gene: 71906222
Centisome position: 14.55
GC content: 61.96
Gene sequence:
>1974_bases ATGACTCACGCAGTTACCCTGCTCCTTGGCGTGCATGCCCACCAGCCGGTCGGCAACTTTCCGGAAGTCATTGAAGACGC CCACCAGCGCTGCTACAGGCCTTTTCTGGAAACCCTGCACGCCTATCCCGACTTCCGCTTCGCTGTCCATTTCTCCGGCT GGCTGCTCGACTGGCTGCGCGAACGCCACCCGGCCGACATGGCTCTATTGGCCGACATGGTCAAGCGCGGCCAGGTCGAA CTGTTCAGCTCCGGCGACACCGAACCGGTGCTGGCGGCCATTCCGCATCGTGACCGCGTCGGGCAACTGAAAACCCTGAA CGACAAGCTGACCGGATGGACCGATGTCAAACCGACCGGTGCCTGGCTGACCGAACGCGTCTGGGAGTCCTCCGTCGTGC CAGCGCTGGCCGAGACCGGCATCCGCTATGTCACGGTCGATGATTACCATTTTTTCTGCACCGGCAAAGCGGCCGATGAG CTCGACAGCTTCTTCAGCACCGAGGAAGATGGCACCCGGCTCGACCTTTTCCCGATTTCCGAAGCGCTGCGTTATCGCCT GCCTTTCTCGCCTGCGCACGAAGTGATCGCTTACCTCGAAAGCCTGGCCGACCGTAACCAAGCCGCCGCCATCTACTTCG ACGACATCGAGAAATTCGGCATCTGGCCGGAAACCTACGACTGGGTCTACAACCGTGGCTGGCTGAAGGCGCTGATCGAA GGCGTGCTGGCCAGCCCGAAAATCCGCACGGGCACCTACGCCGATTTTCACGCCAACAACGTGACACGCGGCATCGTCTA TTTGCCAACCACGTCGTACAGCGAGATGAACGAATGGACGTTGCCGATGCCTGCCGCCGGCATCTACTCATCCTTCCTCG CCACCGAAAAAGCCGCCGGGCGCGGCGATCTGCACCGGCCTTTCCTGCGCGGCGGAATCTGGCGCAACTTCCTGACCCGT TATCCGGAAGCCAACTGGATGCACAAACGCATGCAGGGCCTGTCGGCACGCCTCGGCGAAATCGCCAATCCGCCGCAGGC ACTGGTCGACGAGCTTTACCGCGCCCAGGCCAACGACGCCTACTGGCACGGCCTGTTTGGCGGGCTCTACCTGCCCCACC TGCGGCGCGCCGTGTGGAACAACATCATTGCCCTCGAAGCCGAACTCGACGCCCAGCATCTCCGCCCGGCCCTTGCCTCG GTCGACCTCGATTTCGACGGTAAAACGGAAACCATCGCTCATACGGCCGCCCTGCAAGTCGTCATCCGCAACGATGGCCT GGCGACTGCCCACGAGTTGAGCAGCTACCCGCTGAAGCACAATTTCGGCGATACGCTGCGCCGCTACCACGAGCACTATC ACGACAAGATCGCCCACGGCCCGAGCGAGCATAGCGGCGAAGGCATCGCCTCGGCCCACGACATCGTCCGCTTCAAACAT CCGATCAGCGCTGAAGACATCGTGCCGGATGCCCTGCCGCGCGCTCTCTGGCTGGACAAACTGGATGGCGCCACACTGGG CGATTACGTCCAGGCCGAAGGCTCGCTCAGCTTTGCCCGCCCGCACATCACCAAGACGTACACGCTGGAGGATTCAACAG TGGCCATTACCTGGCAACTGAACGGTCTGGCCGGACACCACTTTGAAACCGCACTCAACCTGGCCATGCCCAGTTGCGAT GGCTTCCTCGGCCGCTACATGCTGGCCGACGGCAGCATCCCCAGCGGCTTTGGGCTGCCCCTGCACCTGCCGGCAGCCAC CACGCTCAGCCTAGACGACGGGGTACTGGGTGGTCGATTGATGCTACAAACCTCCCTGGCTGGCGAAATTCACGGCCAAC CACACCAAACCGTCTCCCAATCGGAAGCCGGCTTTGAGAAAATCATGCAGGCGGTCGAACTCCGGCTCGGCTGGACCATC CCCGACAATTGCCAGACCCTGCAACTCCAACTGAACATAGAACCCAGACCATGA
Upstream 100 bases:
>100_bases CAACCTGCCCCTGGCAGCCAGCCTTGATCACCCGATCAGCAAAGGCGGCGGCGAGCCAGAAAGTGGCGGCACCATGCGCC GCGCCACCTAAGAAATCACC
Downstream 100 bases:
>100_bases CCGGAACTGTTTACAACCTCGAAGTCAATCCGCTGCTGCCGGAACGTCTGGAACGCCTCGAAGAACTGGCCAACAACCTC TGGTACAGCTGGGACCGCCC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTHAVTLLLGVHAHQPVGNFPEVIEDAHQRCYRPFLETLHAYPDFRFAVHFSGWLLDWLRERHPADMALLADMVKRGQVE LFSSGDTEPVLAAIPHRDRVGQLKTLNDKLTGWTDVKPTGAWLTERVWESSVVPALAETGIRYVTVDDYHFFCTGKAADE LDSFFSTEEDGTRLDLFPISEALRYRLPFSPAHEVIAYLESLADRNQAAAIYFDDIEKFGIWPETYDWVYNRGWLKALIE GVLASPKIRTGTYADFHANNVTRGIVYLPTTSYSEMNEWTLPMPAAGIYSSFLATEKAAGRGDLHRPFLRGGIWRNFLTR YPEANWMHKRMQGLSARLGEIANPPQALVDELYRAQANDAYWHGLFGGLYLPHLRRAVWNNIIALEAELDAQHLRPALAS VDLDFDGKTETIAHTAALQVVIRNDGLATAHELSSYPLKHNFGDTLRRYHEHYHDKIAHGPSEHSGEGIASAHDIVRFKH PISAEDIVPDALPRALWLDKLDGATLGDYVQAEGSLSFARPHITKTYTLEDSTVAITWQLNGLAGHHFETALNLAMPSCD GFLGRYMLADGSIPSGFGLPLHLPAATTLSLDDGVLGGRLMLQTSLAGEIHGQPHQTVSQSEAGFEKIMQAVELRLGWTI PDNCQTLQLQLNIEPRP
Sequences:
>Translated_657_residues MTHAVTLLLGVHAHQPVGNFPEVIEDAHQRCYRPFLETLHAYPDFRFAVHFSGWLLDWLRERHPADMALLADMVKRGQVE LFSSGDTEPVLAAIPHRDRVGQLKTLNDKLTGWTDVKPTGAWLTERVWESSVVPALAETGIRYVTVDDYHFFCTGKAADE LDSFFSTEEDGTRLDLFPISEALRYRLPFSPAHEVIAYLESLADRNQAAAIYFDDIEKFGIWPETYDWVYNRGWLKALIE GVLASPKIRTGTYADFHANNVTRGIVYLPTTSYSEMNEWTLPMPAAGIYSSFLATEKAAGRGDLHRPFLRGGIWRNFLTR YPEANWMHKRMQGLSARLGEIANPPQALVDELYRAQANDAYWHGLFGGLYLPHLRRAVWNNIIALEAELDAQHLRPALAS VDLDFDGKTETIAHTAALQVVIRNDGLATAHELSSYPLKHNFGDTLRRYHEHYHDKIAHGPSEHSGEGIASAHDIVRFKH PISAEDIVPDALPRALWLDKLDGATLGDYVQAEGSLSFARPHITKTYTLEDSTVAITWQLNGLAGHHFETALNLAMPSCD GFLGRYMLADGSIPSGFGLPLHLPAATTLSLDDGVLGGRLMLQTSLAGEIHGQPHQTVSQSEAGFEKIMQAVELRLGWTI PDNCQTLQLQLNIEPRP >Mature_656_residues THAVTLLLGVHAHQPVGNFPEVIEDAHQRCYRPFLETLHAYPDFRFAVHFSGWLLDWLRERHPADMALLADMVKRGQVEL FSSGDTEPVLAAIPHRDRVGQLKTLNDKLTGWTDVKPTGAWLTERVWESSVVPALAETGIRYVTVDDYHFFCTGKAADEL DSFFSTEEDGTRLDLFPISEALRYRLPFSPAHEVIAYLESLADRNQAAAIYFDDIEKFGIWPETYDWVYNRGWLKALIEG VLASPKIRTGTYADFHANNVTRGIVYLPTTSYSEMNEWTLPMPAAGIYSSFLATEKAAGRGDLHRPFLRGGIWRNFLTRY PEANWMHKRMQGLSARLGEIANPPQALVDELYRAQANDAYWHGLFGGLYLPHLRRAVWNNIIALEAELDAQHLRPALASV DLDFDGKTETIAHTAALQVVIRNDGLATAHELSSYPLKHNFGDTLRRYHEHYHDKIAHGPSEHSGEGIASAHDIVRFKHP ISAEDIVPDALPRALWLDKLDGATLGDYVQAEGSLSFARPHITKTYTLEDSTVAITWQLNGLAGHHFETALNLAMPSCDG FLGRYMLADGSIPSGFGLPLHLPAATTLSLDDGVLGGRLMLQTSLAGEIHGQPHQTVSQSEAGFEKIMQAVELRLGWTIP DNCQTLQLQLNIEPRP
Specific function: Catalyzes the transglycosylation of maltooligosaccharides, yielding maltooligosaccharides of various lengths and glucose [H]
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 57 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015179 - InterPro: IPR015178 - InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR000602 - InterPro: IPR004300 - ProDom: PD014405 [H]
Pfam domain/function: PF09094 DUF1925; PF09095 DUF1926; PF03065 Glyco_hydro_57 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 73447; Mature: 73315
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAVTLLLGVHAHQPVGNFPEVIEDAHQRCYRPFLETLHAYPDFRFAVHFSGWLLDWLR CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH ERHPADMALLADMVKRGQVELFSSGDTEPVLAAIPHRDRVGQLKTLNDKLTGWTDVKPTG HCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCH AWLTERVWESSVVPALAETGIRYVTVDDYHFFCTGKAADELDSFFSTEEDGTRLDLFPIS HHHHHHHHHHHCCHHHHHCCCEEEEEECEEEEEECCCHHHHHHHHCCCCCCCEEEEEEHH EALRYRLPFSPAHEVIAYLESLADRNQAAAIYFDDIEKFGIWPETYDWVYNRGWLKALIE HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCHHHHHHCCHHHHHHHH GVLASPKIRTGTYADFHANNVTRGIVYLPTTSYSEMNEWTLPMPAAGIYSSFLATEKAAG HHHCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RGDLHRPFLRGGIWRNFLTRYPEANWMHKRMQGLSARLGEIANPPQALVDELYRAQANDA CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC YWHGLFGGLYLPHLRRAVWNNIIALEAELDAQHLRPALASVDLDFDGKTETIAHTAALQV HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHEEEEE VIRNDGLATAHELSSYPLKHNFGDTLRRYHEHYHDKIAHGPSEHSGEGIASAHDIVRFKH EEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC PISAEDIVPDALPRALWLDKLDGATLGDYVQAEGSLSFARPHITKTYTLEDSTVAITWQL CCCHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCEECCCCCEEEEEECCCEEEEEEEE NGLAGHHFETALNLAMPSCDGFLGRYMLADGSIPSGFGLPLHLPAATTLSLDDGVLGGRL CCCCCCHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCEEECCCCEEEECCCCCCCCEE MLQTSLAGEIHGQPHQTVSQSEAGFEKIMQAVELRLGWTIPDNCQTLQLQLNIEPRP EEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure THAVTLLLGVHAHQPVGNFPEVIEDAHQRCYRPFLETLHAYPDFRFAVHFSGWLLDWLR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH ERHPADMALLADMVKRGQVELFSSGDTEPVLAAIPHRDRVGQLKTLNDKLTGWTDVKPTG HCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCCH AWLTERVWESSVVPALAETGIRYVTVDDYHFFCTGKAADELDSFFSTEEDGTRLDLFPIS HHHHHHHHHHHCCHHHHHCCCEEEEEECEEEEEECCCHHHHHHHHCCCCCCCEEEEEEHH EALRYRLPFSPAHEVIAYLESLADRNQAAAIYFDDIEKFGIWPETYDWVYNRGWLKALIE HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCHHHHHHCCHHHHHHHH GVLASPKIRTGTYADFHANNVTRGIVYLPTTSYSEMNEWTLPMPAAGIYSSFLATEKAAG HHHCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RGDLHRPFLRGGIWRNFLTRYPEANWMHKRMQGLSARLGEIANPPQALVDELYRAQANDA CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC YWHGLFGGLYLPHLRRAVWNNIIALEAELDAQHLRPALASVDLDFDGKTETIAHTAALQV HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHEEEEE VIRNDGLATAHELSSYPLKHNFGDTLRRYHEHYHDKIAHGPSEHSGEGIASAHDIVRFKH EEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC PISAEDIVPDALPRALWLDKLDGATLGDYVQAEGSLSFARPHITKTYTLEDSTVAITWQL CCCHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCEECCCCCEEEEEECCCEEEEEEEE NGLAGHHFETALNLAMPSCDGFLGRYMLADGSIPSGFGLPLHLPAATTLSLDDGVLGGRL CCCCCCHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCEEECCCCEEEECCCCCCCCEE MLQTSLAGEIHGQPHQTVSQSEAGFEKIMQAVELRLGWTIPDNCQTLQLQLNIEPRP EEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9310375; 12618437 [H]