| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is glgP [H]
Identifier: 71906222
GI number: 71906222
Start: 650315
End: 652885
Strand: Reverse
Name: glgP [H]
Synonym: Daro_0582
Alternate gene names: 71906222
Gene position: 652885-650315 (Counterclockwise)
Preceding gene: 71906223
Following gene: 71906221
Centisome position: 14.5
GC content: 63.48
Gene sequence:
>2571_bases ATGACCGGAACTGTTTACAACCTCGAAGTCAATCCGCTGCTGCCGGAACGTCTGGAACGCCTCGAAGAACTGGCCAACAA CCTCTGGTACAGCTGGGACCGCCCGACCCAGGGCCTGTTCGCCAGCCTGTCGCACTCACTGTGGAAGGCGACTAACCACA ATCCCAAGGCCTTCCTGAAGCGGGCCGACCAGAAGCGCCTGGAAGCGATTGCCGAAGACCCGGTCTTTCTCGGCGCCCTG AATCGCGTCGTCTCGTCCTACGACACCTACCACGAGATGCCGAACATGGCCCACGTGCACGGCCAGCCCTTCGCCGACGA CGACCTGATTGCCTACTTCTGCGCCGAATTCGGTTTCCACGAAAGCCTGCCGATCTATTCCGGCGGTCTCGGCATCCTGG CCGGCGACCACTGCAAGGCGGCCAGCGACATGGGCCTGCCCTTCATCGGCGTCGGCCTGCTCTACCGCCAAGGCTATTTC CAGCAGACACTGACCGCCGACGGCCATCAGCAGGCCACCTACAACGATTCGGATTTCGATGACCTGCCGGTCACTCCCCT GCTCGATGCCGACGGCCGGGAAGTTCTGGTCGCGGTCGACTTCCCCGGCCGGACCATCCAGGCCAAGGTCTGGGAAGTGA CTGTCGGCCATGTCCGATTGATCCTGCTCGACACCTGGCTGCCGATCAATAGCGCGCGCGACCGGGAAATCACCCACCGC CTGTACGGCGGCGACAAAACGACGCGCATCGAACAGGAAATCCTGCTCGGTGTCGGCGGCACCCGCGCCCTGGCCGCCCT TGGCCTGAAACCAACGGTCTGGCACGTCAACGAAGGCCATGCCGCCTTCCTGATCCTCGAACGCATCCGCGGCCTGATCA AGGGCGGCCTGCCCTATGCCGCCGCCCTCGAAGCGGTCGCCTCGAATGTCGTATTCACGACGCACACGCCGGTGCCGGCC GGGCACGATCATTTCCCGGAAGAAATGATCCGCAACTATTTCAGCGCCTGGTGCCATGATCTCGATCTGAGTTGCGAACA TCTGATGAACCTCGGCGCCGAACCGGGCAAGACAGACTTCAACATGACTGCCCTGGCCCTGCGCGGCTCGCGTCACCACA ACGGCGTATCGCGCATCCATGGCGACGTTTCGGCCGACATCTGCCGCTACCTTTGGCCGCAAATCCTGCCGGAAGAGAAT CCGATGGACTACGTGACCAACGGCGTCCACCTGCCCACCTTCCTGGCGCCGGAGTGGTTCGAAACCTTCGAGCACTATCT TGGTATCGGCTGGCAGGAAAGACAGACCCAGCCGGGCAACTGGCACGGCATCGACGACATCCCCGATGCCACCTACTGGA GCATCCGCCAGCAGTTGAAGTCCAAGCTGCTCAAGCTGGTCCGCGAACGCATCCGCGAACAACACCACCGCAATCAGGGC TCGCCGTCACACCTTGATCGCCTGCTCAAATACGCCGACCCGGACAACCCGAACATCCTGACCATCGGCTTCGCCCGCCG CTTCGCCACCTACAAGCGGGCCGCGCTGCTCTTCCAGGACCCGACCTGGTTACGCGAGATCATCACCCAGGCCAACCGGC CGGTGCTCTTCCTGTTCGCCGGCAAGGCCCATCCGGCCGACCTGCCGGGCCAGGAGATCATCCGCAAGATCGCCGAAATG GCCAAGCTGCCGGAGTTCGAAGGGCGCATCCTGCTCGTCGAAGGCTATGACCTGCACCTGTCGCGCTCTTTGGTCGCCGG CGTCGATGTCTGGCTGAACAATCCGATCTACCCGCTGGAAGCGTCCGGCACCTCGGGCATGAAGGCCGCGATGAACGGCG CACTCAACCTCTCGGTCCTCGATGGCTGGTGGGGTGAAGGCTATGACGAAGGCGACGGCGGCATCGCCAACGGCTGGGCC ATCAAGCCGGTGCCCGGCCACCTCAGCGATGTACAACGCGACGCCGAAGAGGCCCGCACGCTGTACGAACTGCTGCAGGA TCAGGTCATCCCGACCTATTACCGGACCGGCCCGATGGGCTATTCGCCGGAATGGGTAGCGATGTCGAAGCGCTCGATTT CGACCATCTCGCCCCGCTTCAATGTGACCCGCATGGTCAGTGAGTACGTCAAGAAGTTCTACTCGCCGGCCGCCGTCCAC GGTCGCCACTTCGCGCAGGCCGACTTTGCCGTCGCCCGCAATGTGGCCGACTGGAAAGCCAAGGTCCGTGCCGCCTGGTC GGGCGTCCGACTGCAGCGCATCGACACGCCGGAGCGCCGCCTGAAGTTCGGCGGCTCGGTCCGCATCGAACTGGCCGTGC AACTGAACGGCCTGCGCCCGGAAGACGTGACGCTTGAAGCCCTGTTCGGCCGACCCGGCCGCGACGGAGGCATCGGCCGC GTCCGCCATTACCCGCTGACCTGCGACGGCCAGAACGATCACGGCGAAATGCGCTACCAACTGGAACTGACGCCGGAACT GTGCGGCAAGCTGGAATACCGCATCCGTATCTTCCCGACCCATGCGTCACTGACCCACCCTCTTGAAACCGGATTGATGA TCTGGCTATGA
Upstream 100 bases:
>100_bases GCTTTGAGAAAATCATGCAGGCGGTCGAACTCCGGCTCGGCTGGACCATCCCCGACAATTGCCAGACCCTGCAACTCCAA CTGAACATAGAACCCAGACC
Downstream 100 bases:
>100_bases ACCCTATCGACTCCCCGGCCTGGCGGGCGCTCGCCGCCCACGCCGAGGCTATCCGCCCGCTGCATCTGCGCGACCTGTTC GCGACCGATCCGCAGCGCTT
Product: Alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MTGTVYNLEVNPLLPERLERLEELANNLWYSWDRPTQGLFASLSHSLWKATNHNPKAFLKRADQKRLEAIAEDPVFLGAL NRVVSSYDTYHEMPNMAHVHGQPFADDDLIAYFCAEFGFHESLPIYSGGLGILAGDHCKAASDMGLPFIGVGLLYRQGYF QQTLTADGHQQATYNDSDFDDLPVTPLLDADGREVLVAVDFPGRTIQAKVWEVTVGHVRLILLDTWLPINSARDREITHR LYGGDKTTRIEQEILLGVGGTRALAALGLKPTVWHVNEGHAAFLILERIRGLIKGGLPYAAALEAVASNVVFTTHTPVPA GHDHFPEEMIRNYFSAWCHDLDLSCEHLMNLGAEPGKTDFNMTALALRGSRHHNGVSRIHGDVSADICRYLWPQILPEEN PMDYVTNGVHLPTFLAPEWFETFEHYLGIGWQERQTQPGNWHGIDDIPDATYWSIRQQLKSKLLKLVRERIREQHHRNQG SPSHLDRLLKYADPDNPNILTIGFARRFATYKRAALLFQDPTWLREIITQANRPVLFLFAGKAHPADLPGQEIIRKIAEM AKLPEFEGRILLVEGYDLHLSRSLVAGVDVWLNNPIYPLEASGTSGMKAAMNGALNLSVLDGWWGEGYDEGDGGIANGWA IKPVPGHLSDVQRDAEEARTLYELLQDQVIPTYYRTGPMGYSPEWVAMSKRSISTISPRFNVTRMVSEYVKKFYSPAAVH GRHFAQADFAVARNVADWKAKVRAAWSGVRLQRIDTPERRLKFGGSVRIELAVQLNGLRPEDVTLEALFGRPGRDGGIGR VRHYPLTCDGQNDHGEMRYQLELTPELCGKLEYRIRIFPTHASLTHPLETGLMIWL
Sequences:
>Translated_856_residues MTGTVYNLEVNPLLPERLERLEELANNLWYSWDRPTQGLFASLSHSLWKATNHNPKAFLKRADQKRLEAIAEDPVFLGAL NRVVSSYDTYHEMPNMAHVHGQPFADDDLIAYFCAEFGFHESLPIYSGGLGILAGDHCKAASDMGLPFIGVGLLYRQGYF QQTLTADGHQQATYNDSDFDDLPVTPLLDADGREVLVAVDFPGRTIQAKVWEVTVGHVRLILLDTWLPINSARDREITHR LYGGDKTTRIEQEILLGVGGTRALAALGLKPTVWHVNEGHAAFLILERIRGLIKGGLPYAAALEAVASNVVFTTHTPVPA GHDHFPEEMIRNYFSAWCHDLDLSCEHLMNLGAEPGKTDFNMTALALRGSRHHNGVSRIHGDVSADICRYLWPQILPEEN PMDYVTNGVHLPTFLAPEWFETFEHYLGIGWQERQTQPGNWHGIDDIPDATYWSIRQQLKSKLLKLVRERIREQHHRNQG SPSHLDRLLKYADPDNPNILTIGFARRFATYKRAALLFQDPTWLREIITQANRPVLFLFAGKAHPADLPGQEIIRKIAEM AKLPEFEGRILLVEGYDLHLSRSLVAGVDVWLNNPIYPLEASGTSGMKAAMNGALNLSVLDGWWGEGYDEGDGGIANGWA IKPVPGHLSDVQRDAEEARTLYELLQDQVIPTYYRTGPMGYSPEWVAMSKRSISTISPRFNVTRMVSEYVKKFYSPAAVH GRHFAQADFAVARNVADWKAKVRAAWSGVRLQRIDTPERRLKFGGSVRIELAVQLNGLRPEDVTLEALFGRPGRDGGIGR VRHYPLTCDGQNDHGEMRYQLELTPELCGKLEYRIRIFPTHASLTHPLETGLMIWL >Mature_855_residues TGTVYNLEVNPLLPERLERLEELANNLWYSWDRPTQGLFASLSHSLWKATNHNPKAFLKRADQKRLEAIAEDPVFLGALN RVVSSYDTYHEMPNMAHVHGQPFADDDLIAYFCAEFGFHESLPIYSGGLGILAGDHCKAASDMGLPFIGVGLLYRQGYFQ QTLTADGHQQATYNDSDFDDLPVTPLLDADGREVLVAVDFPGRTIQAKVWEVTVGHVRLILLDTWLPINSARDREITHRL YGGDKTTRIEQEILLGVGGTRALAALGLKPTVWHVNEGHAAFLILERIRGLIKGGLPYAAALEAVASNVVFTTHTPVPAG HDHFPEEMIRNYFSAWCHDLDLSCEHLMNLGAEPGKTDFNMTALALRGSRHHNGVSRIHGDVSADICRYLWPQILPEENP MDYVTNGVHLPTFLAPEWFETFEHYLGIGWQERQTQPGNWHGIDDIPDATYWSIRQQLKSKLLKLVRERIREQHHRNQGS PSHLDRLLKYADPDNPNILTIGFARRFATYKRAALLFQDPTWLREIITQANRPVLFLFAGKAHPADLPGQEIIRKIAEMA KLPEFEGRILLVEGYDLHLSRSLVAGVDVWLNNPIYPLEASGTSGMKAAMNGALNLSVLDGWWGEGYDEGDGGIANGWAI KPVPGHLSDVQRDAEEARTLYELLQDQVIPTYYRTGPMGYSPEWVAMSKRSISTISPRFNVTRMVSEYVKKFYSPAAVHG RHFAQADFAVARNVADWKAKVRAAWSGVRLQRIDTPERRLKFGGSVRIELAVQLNGLRPEDVTLEALFGRPGRDGGIGRV RHYPLTCDGQNDHGEMRYQLELTPELCGKLEYRIRIFPTHASLTHPLETGLMIWL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=449, Percent_Identity=23.8307349665924, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96319; Mature: 96187
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTVYNLEVNPLLPERLERLEELANNLWYSWDRPTQGLFASLSHSLWKATNHNPKAFLK CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RADQKRLEAIAEDPVFLGALNRVVSSYDTYHEMPNMAHVHGQPFADDDLIAYFCAEFGFH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCC ESLPIYSGGLGILAGDHCKAASDMGLPFIGVGLLYRQGYFQQTLTADGHQQATYNDSDFD CCCCEECCCEEEEECCCCCCHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC DLPVTPLLDADGREVLVAVDFPGRTIQAKVWEVTVGHVRLILLDTWLPINSARDREITHR CCCCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECEEEEEEEECCCCCCCCCCHHHHHH LYGGDKTTRIEQEILLGVGGTRALAALGLKPTVWHVNEGHAAFLILERIRGLIKGGLPYA HHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHH AALEAVASNVVFTTHTPVPAGHDHFPEEMIRNYFSAWCHDLDLSCEHLMNLGAEPGKTDF HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC NMTALALRGSRHHNGVSRIHGDVSADICRYLWPQILPEENPMDYVTNGVHLPTFLAPEWF CEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHCCHHHH ETFEHYLGIGWQERQTQPGNWHGIDDIPDATYWSIRQQLKSKLLKLVRERIREQHHRNQG HHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPSHLDRLLKYADPDNPNILTIGFARRFATYKRAALLFQDPTWLREIITQANRPVLFLFA CHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCEEEEEE GKAHPADLPGQEIIRKIAEMAKLPEFEGRILLVEGYDLHLSRSLVAGVDVWLNNPIYPLE CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEE ASGTSGMKAAMNGALNLSVLDGWWGEGYDEGDGGIANGWAIKPVPGHLSDVQRDAEEART CCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH LYELLQDQVIPTYYRTGPMGYSPEWVAMSKRSISTISPRFNVTRMVSEYVKKFYSPAAVH HHHHHHHCCCCHHEECCCCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCHHHC GRHFAQADFAVARNVADWKAKVRAAWSGVRLQRIDTPERRLKFGGSVRIELAVQLNGLRP CCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEEEEECCCCC EDVTLEALFGRPGRDGGIGRVRHYPLTCDGQNDHGEMRYQLELTPELCGKLEYRIRIFPT CCEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCEEEEEEECHHHCCCEEEEEEEEEC HASLTHPLETGLMIWL CCCCCCHHHCCCEEEC >Mature Secondary Structure TGTVYNLEVNPLLPERLERLEELANNLWYSWDRPTQGLFASLSHSLWKATNHNPKAFLK CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH RADQKRLEAIAEDPVFLGALNRVVSSYDTYHEMPNMAHVHGQPFADDDLIAYFCAEFGFH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCC ESLPIYSGGLGILAGDHCKAASDMGLPFIGVGLLYRQGYFQQTLTADGHQQATYNDSDFD CCCCEECCCEEEEECCCCCCHHCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC DLPVTPLLDADGREVLVAVDFPGRTIQAKVWEVTVGHVRLILLDTWLPINSARDREITHR CCCCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECEEEEEEEECCCCCCCCCCHHHHHH LYGGDKTTRIEQEILLGVGGTRALAALGLKPTVWHVNEGHAAFLILERIRGLIKGGLPYA HHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHH AALEAVASNVVFTTHTPVPAGHDHFPEEMIRNYFSAWCHDLDLSCEHLMNLGAEPGKTDF HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC NMTALALRGSRHHNGVSRIHGDVSADICRYLWPQILPEENPMDYVTNGVHLPTFLAPEWF CEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHCCHHHH ETFEHYLGIGWQERQTQPGNWHGIDDIPDATYWSIRQQLKSKLLKLVRERIREQHHRNQG HHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPSHLDRLLKYADPDNPNILTIGFARRFATYKRAALLFQDPTWLREIITQANRPVLFLFA CHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCEEEEEE GKAHPADLPGQEIIRKIAEMAKLPEFEGRILLVEGYDLHLSRSLVAGVDVWLNNPIYPLE CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEE ASGTSGMKAAMNGALNLSVLDGWWGEGYDEGDGGIANGWAIKPVPGHLSDVQRDAEEART CCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH LYELLQDQVIPTYYRTGPMGYSPEWVAMSKRSISTISPRFNVTRMVSEYVKKFYSPAAVH HHHHHHHCCCCHHEECCCCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHHHHHCCCHHHC GRHFAQADFAVARNVADWKAKVRAAWSGVRLQRIDTPERRLKFGGSVRIELAVQLNGLRP CCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEEEEECCCCC EDVTLEALFGRPGRDGGIGRVRHYPLTCDGQNDHGEMRYQLELTPELCGKLEYRIRIFPT CCEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCEEEEEEECHHHCCCEEEEEEEEEC HASLTHPLETGLMIWL CCCCCCHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]