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The map label for this gene is glgA

Identifier: 71906220

GI number: 71906220

Start: 647278

End: 648735

Strand: Reverse

Name: glgA

Synonym: Daro_0580

Alternate gene names: 71906220

Gene position: 648735-647278 (Counterclockwise)

Preceding gene: 71906221

Following gene: 71906219

Centisome position: 14.41

GC content: 65.16

Gene sequence:

>1458_bases
ATGAGCTCGCTCTCGATTCTCTTTGCCACCTCCGAAATGGCCCCCTGGGTCAAGACCGGTGGTCTCGGCGATGTCGCCGC
CGCCCTGCCTGCCGCCTTGCGCAAGGCCGGCCACGACATCCGCGTCCTGCTGCCGGCCTACCCGGCGCTGAAACAGGCTT
TCCCGACAGCGACGACGGTCGCTGAACTGCCCGCCTTCGCCCCGGGACTGCCGGCCTCCCGGCTGCTTGCCGCCCAGACC
GGCAAGCTGGAATTGCTGCTGCTCGACTGCCCGGAACTCTACGACCGCCCGGGCAACCCCTATCTCGATGCCACTGGCCG
CGACTGGCCCGACAATGCGCTGCGCTTCGGCCTGCTGTCGCGGGTTGCCGCCCGCCTCGGCCAGCCGGATTCACCGCTGA
GCTGGCAGCCCGACATCGTCCACGCCAACGACTGGCAAACCGCCCTCGCACCAGCTTACCTGCATTACCAGGGCGGTGCG
GCCAGCGTCGTCACCGTGCACAACATCGCCTTCCAGGGCTGCTTCGGTCGCGAAATGCTGGCCGCCCTTGGCCTGCCGGA
ACACGCCTGGCGTTTCGATGGGGTCGAATATCACGACCAGCTATCGTTCCTGAAAGCCGGCCTGCAACTCGCCTCACAGA
TTTCCACGGTCAGCCCGACCTATGCCCGGGAAATCCAGGACGAGCATTTCGGCTATGGCCTGGCCCCGCTGCTGCGCCAC
CGCAGCGCGGAACTGCGCGGCATTTTGAACGGCGTTGATACCGACCTCTGGAATCCGGCCACCGACCCGGTACTGGCGAC
CGGCTATGCGGCCAACCGCCTGGCTGCCAAGCGGACCAACAAAGCGGCACTGCAAACCGAAATGGGGCTGGAGGTCACCG
CTGACCGCCCGCTGTTCGGTGTGATCAGCCGTCTGACCAGCCAGAAAGGCCTCGACCTGCTGCTCACCGTCGCCGAAGGC
CTGCCCGAGCTACCGGCCCAACTGGTCGTACTGGGCAGCGGTGACAAGCTTATGGAGGCGGGTTTCGTTGAGCTGGCCAA
GCGCTTCCCGGCGCAGATTGTCGTCAAGATCGGCTTTGATGAAGGCCTTGCCCATCGTATCGAAGCCGGCGCCGACTGCT
TCGTGATGCCATCGCGCTTCGAACCCTGCGGCCTGAACCAGATGTACAGCCTGCGTTACGGCACGCCGCCCATCGTTCGC
GCCACCGGCGGCCTGGCCGATACGGTCGTCGATGTCTGTGAAGACACGCTGGCCGACAAGTCGGCCAACGGATTTGTGCT
CGACGGCGACACGCCGCATGCACTCTGGCTGACCATCGAGCATGTATGCCGCACCTGGCAGGACAAGAAACTGTGGCAGC
GCATCCAGCAGAACGGCATGCGCCGGGATTTTTCCTGGACGCACGCCGCCAACGAATACGTTGCGCTCTATCGCGACGCC
ATCGCTACCCGAGCTTAA

Upstream 100 bases:

>100_bases
AACTGGCCGGCCAGCTGACCCCGCTGATCGAGGGCAACGGCGATCTGTCAGCCTTCGACAGCTCGACACGCGGCCTGATC
ACGGCCCTGAAAGGATAATC

Downstream 100 bases:

>100_bases
GCACCAGCATGCCCGAAATCATTCTCATCGCCGCCGTCGCCAAAAACCGGGTGATCGGCAAGGACAACACGCTGATCTGG
AACCTTCCAGAGGACATGGC

Product: glycogen/starch synthase, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSSLSILFATSEMAPWVKTGGLGDVAAALPAALRKAGHDIRVLLPAYPALKQAFPTATTVAELPAFAPGLPASRLLAAQT
GKLELLLLDCPELYDRPGNPYLDATGRDWPDNALRFGLLSRVAARLGQPDSPLSWQPDIVHANDWQTALAPAYLHYQGGA
ASVVTVHNIAFQGCFGREMLAALGLPEHAWRFDGVEYHDQLSFLKAGLQLASQISTVSPTYAREIQDEHFGYGLAPLLRH
RSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFGVISRLTSQKGLDLLLTVAEG
LPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFDEGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVR
ATGGLADTVVDVCEDTLADKSANGFVLDGDTPHALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEYVALYRDA
IATRA

Sequences:

>Translated_485_residues
MSSLSILFATSEMAPWVKTGGLGDVAAALPAALRKAGHDIRVLLPAYPALKQAFPTATTVAELPAFAPGLPASRLLAAQT
GKLELLLLDCPELYDRPGNPYLDATGRDWPDNALRFGLLSRVAARLGQPDSPLSWQPDIVHANDWQTALAPAYLHYQGGA
ASVVTVHNIAFQGCFGREMLAALGLPEHAWRFDGVEYHDQLSFLKAGLQLASQISTVSPTYAREIQDEHFGYGLAPLLRH
RSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFGVISRLTSQKGLDLLLTVAEG
LPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFDEGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVR
ATGGLADTVVDVCEDTLADKSANGFVLDGDTPHALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEYVALYRDA
IATRA
>Mature_484_residues
SSLSILFATSEMAPWVKTGGLGDVAAALPAALRKAGHDIRVLLPAYPALKQAFPTATTVAELPAFAPGLPASRLLAAQTG
KLELLLLDCPELYDRPGNPYLDATGRDWPDNALRFGLLSRVAARLGQPDSPLSWQPDIVHANDWQTALAPAYLHYQGGAA
SVVTVHNIAFQGCFGREMLAALGLPEHAWRFDGVEYHDQLSFLKAGLQLASQISTVSPTYAREIQDEHFGYGLAPLLRHR
SAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFGVISRLTSQKGLDLLLTVAEGL
PELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFDEGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVRA
TGGLADTVVDVCEDTLADKSANGFVLDGDTPHALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEYVALYRDAI
ATRA

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=477, Percent_Identity=47.1698113207547, Blast_Score=417, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_DECAR (Q47IJ4)

Other databases:

- EMBL:   CP000089
- RefSeq:   YP_283807.1
- STRING:   Q47IJ4
- GeneID:   3568806
- GenomeReviews:   CP000089_GR
- KEGG:   dar:Daro_0580
- NMPDR:   fig|159087.4.peg.429
- eggNOG:   COG0297
- HOGENOM:   HBG596384
- OMA:   GLTQLCA
- BioCyc:   DARO159087:DARO_0580-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 52713; Mature: 52582

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: BINDING 18-18

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSILFATSEMAPWVKTGGLGDVAAALPAALRKAGHDIRVLLPAYPALKQAFPTATTV
CCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHH
AELPAFAPGLPASRLLAAQTGKLELLLLDCPELYDRPGNPYLDATGRDWPDNALRFGLLS
HHCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
RVAARLGQPDSPLSWQPDIVHANDWQTALAPAYLHYQGGAASVVTVHNIAFQGCFGREML
HHHHHCCCCCCCCCCCCCEEECCCCCHHHCCEEEEECCCCEEEEEEEHHHHCCCCHHHHH
AALGLPEHAWRFDGVEYHDQLSFLKAGLQLASQISTVSPTYAREIQDEHFGYGLAPLLRH
HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
RSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFG
HHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHCCCEEECCCCHHH
VISRLTSQKGLDLLLTVAEGLPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFD
HHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCC
EGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVRATGGLADTVVDVCEDTLADK
CCHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHCC
SANGFVLDGDTPHALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEYVALYRDA
CCCCEEEECCCCCCHHEEHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IATRA
HHCCC
>Mature Secondary Structure 
SSLSILFATSEMAPWVKTGGLGDVAAALPAALRKAGHDIRVLLPAYPALKQAFPTATTV
CCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHH
AELPAFAPGLPASRLLAAQTGKLELLLLDCPELYDRPGNPYLDATGRDWPDNALRFGLLS
HHCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
RVAARLGQPDSPLSWQPDIVHANDWQTALAPAYLHYQGGAASVVTVHNIAFQGCFGREML
HHHHHCCCCCCCCCCCCCEEECCCCCHHHCCEEEEECCCCEEEEEEEHHHHCCCCHHHHH
AALGLPEHAWRFDGVEYHDQLSFLKAGLQLASQISTVSPTYAREIQDEHFGYGLAPLLRH
HHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
RSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFG
HHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHCCCEEECCCCHHH
VISRLTSQKGLDLLLTVAEGLPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFD
HHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCC
EGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVRATGGLADTVVDVCEDTLADK
CCHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHCC
SANGFVLDGDTPHALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEYVALYRDA
CCCCEEEECCCCCCHHEEHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IATRA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA