| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is folA [H]
Identifier: 71906219
GI number: 71906219
Start: 646778
End: 647269
Strand: Reverse
Name: folA [H]
Synonym: Daro_0579
Alternate gene names: 71906219
Gene position: 647269-646778 (Counterclockwise)
Preceding gene: 71906220
Following gene: 71906214
Centisome position: 14.38
GC content: 60.77
Gene sequence:
>492_bases ATGCCCGAAATCATTCTCATCGCCGCCGTCGCCAAAAACCGGGTGATCGGCAAGGACAACACGCTGATCTGGAACCTTCC AGAGGACATGGCGCACTTCAAGGCGCTGACCGCCGGCCAGACCGTGGTCATGGGTCGCAAGACCTGGGAGTCGCTGCCGC CACGTTTCCGCCCCCTACCGGGTCGCCGCAACGTCGTGATCAGCCGCCAGGCCGATTACGCCGCCCCCGGCGCCGAAGTT GCCAACTCGCTGGAAAACGCCCTGCAACTGGCGTCGACGGCTGAAAGCGTTTTTATCATTGGCGGCGAGCAGATTTACAA ACAGGCGATGGCAGTCGCCGACCGCCTTGAAATCACCGACGTCGACCTCGAACCGGCAGGCGATGCCTGGTTCCCGGAAA TCGCAGCAACCGACTGGTCAGTCACACAAAAAAACACCCCGCCCAGCCAAAGCGGAACGGGGTTTTCTTTTGTGACCTAT CGCCGCAAATAG
Upstream 100 bases:
>100_bases AGCAGAACGGCATGCGCCGGGATTTTTCCTGGACGCACGCCGCCAACGAATACGTTGCGCTCTATCGCGACGCCATCGCT ACCCGAGCTTAAGCACCAGC
Downstream 100 bases:
>100_bases CGGCCGGGTTCAGCGCACGCAATCGACGTAGTAGCTGCCGTCCCCGCCCTTGACCAGACCGTGCACGTCGGTCTCGAAGC CGGGGAAGCGGGCGTTGAAC
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPEIILIAAVAKNRVIGKDNTLIWNLPEDMAHFKALTAGQTVVMGRKTWESLPPRFRPLPGRRNVVISRQADYAAPGAEV ANSLENALQLASTAESVFIIGGEQIYKQAMAVADRLEITDVDLEPAGDAWFPEIAATDWSVTQKNTPPSQSGTGFSFVTY RRK
Sequences:
>Translated_163_residues MPEIILIAAVAKNRVIGKDNTLIWNLPEDMAHFKALTAGQTVVMGRKTWESLPPRFRPLPGRRNVVISRQADYAAPGAEV ANSLENALQLASTAESVFIIGGEQIYKQAMAVADRLEITDVDLEPAGDAWFPEIAATDWSVTQKNTPPSQSGTGFSFVTY RRK >Mature_162_residues PEIILIAAVAKNRVIGKDNTLIWNLPEDMAHFKALTAGQTVVMGRKTWESLPPRFRPLPGRRNVVISRQADYAAPGAEVA NSLENALQLASTAESVFIIGGEQIYKQAMAVADRLEITDVDLEPAGDAWFPEIAATDWSVTQKNTPPSQSGTGFSFVTYR RK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=152, Percent_Identity=34.2105263157895, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI28827793, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1786233, Length=166, Percent_Identity=36.144578313253, Blast_Score=109, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17505899, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6324810, Length=139, Percent_Identity=33.8129496402878, Blast_Score=87, Evalue=1e-18, Organism=Drosophila melanogaster, GI116008026, Length=143, Percent_Identity=33.5664335664336, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24647458, Length=143, Percent_Identity=33.5664335664336, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 17871; Mature: 17739
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIILIAAVAKNRVIGKDNTLIWNLPEDMAHFKALTAGQTVVMGRKTWESLPPRFRPLP CCCEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCC GRRNVVISRQADYAAPGAEVANSLENALQLASTAESVFIIGGEQIYKQAMAVADRLEITD CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCEEEE VDLEPAGDAWFPEIAATDWSVTQKNTPPSQSGTGFSFVTYRRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure PEIILIAAVAKNRVIGKDNTLIWNLPEDMAHFKALTAGQTVVMGRKTWESLPPRFRPLP CCEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCC GRRNVVISRQADYAAPGAEVANSLENALQLASTAESVFIIGGEQIYKQAMAVADRLEITD CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCEEEE VDLEPAGDAWFPEIAATDWSVTQKNTPPSQSGTGFSFVTYRRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6434541 [H]