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The map label for this gene is yaeJ [C]

Identifier: 71906176

GI number: 71906176

Start: 594962

End: 595363

Strand: Reverse

Name: yaeJ [C]

Synonym: Daro_0536

Alternate gene names: 71906176

Gene position: 595363-594962 (Counterclockwise)

Preceding gene: 71906177

Following gene: 71906175

Centisome position: 13.23

GC content: 63.43

Gene sequence:

>402_bases
ATGCCACCGATTGCCCTCAACGAAAGCGAAGTCGAATTCATCGCCATCCGTGCCCAAGGGGCGGGCGGCCAGAACGTCAA
CAAGGTGTCGAATGCGGTGCATCTGCGCTTCGATATTGCCGCCTCCAGCCTGCCCGAGGAAATCAAGGCGAAGCTGCTGG
CCATGCGTGACCAGCGGATCAGCAGCGACGGCATCGTCGTCATCAAGGCGCAGAAGCATCGCAGCCTCGAACGCAACCGG
GAGGATGGTCTGGTCCGCCTGCGCGAACTGATTGCGGCGGCTGCCTTCGTGCCGACCGTGCGGCGGGCGACCAAGCCGAG
CCGCAGTTCGCAACGGAAGCGCGTCGACAGCAAGGTCAAGCGCGGCCAGGTCAAACTGCTGCGCAGCCGTATCGACGAAT
GA

Upstream 100 bases:

>100_bases
CACGCCGACATCTCGACCACCCAGATTTACACCCACGTCGCCCGGGAACGCCTGAAGACCCTGCACGCCGTGCATCATCC
TCGCGGCTGAAAGAATACGC

Downstream 100 bases:

>100_bases
CCAGTGGCATCAACCCGCCCGACACGCCATTGCCACGGTGCAACCAGTGCGCCCATTACTTCATCACCCATGAACTGCCG
TTCCGCTATGGCTGCCGGGC

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDIAASSLPEEIKAKLLAMRDQRISSDGIVVIKAQKHRSLERNR
EDGLVRLRELIAAAAFVPTVRRATKPSRSSQRKRVDSKVKRGQVKLLRSRIDE

Sequences:

>Translated_133_residues
MPPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDIAASSLPEEIKAKLLAMRDQRISSDGIVVIKAQKHRSLERNR
EDGLVRLRELIAAAAFVPTVRRATKPSRSSQRKRVDSKVKRGQVKLLRSRIDE
>Mature_132_residues
PPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDIAASSLPEEIKAKLLAMRDQRISSDGIVVIKAQKHRSLERNRE
DGLVRLRELIAAAAFVPTVRRATKPSRSSQRKRVDSKVKRGQVKLLRSRIDE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=128, Percent_Identity=51.5625, Blast_Score=129, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 14832; Mature: 14701

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDIAASSLPEEIKAKLLAMRDQRI
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCHHCCCHHHHHHHHHHHHCCC
SSDGIVVIKAQKHRSLERNREDGLVRLRELIAAAAFVPTVRRATKPSRSSQRKRVDSKVK
CCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RGQVKLLRSRIDE
HHHHHHHHHHCCC
>Mature Secondary Structure 
PPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDIAASSLPEEIKAKLLAMRDQRI
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCHHCCCHHHHHHHHHHHHCCC
SSDGIVVIKAQKHRSLERNREDGLVRLRELIAAAAFVPTVRRATKPSRSSQRKRVDSKVK
CCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RGQVKLLRSRIDE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]