| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906150
Identifier: 71906150
GI number: 71906150
Start: 570349
End: 571230
Strand: Reverse
Name: 71906150
Synonym: Daro_0510
Alternate gene names: NA
Gene position: 571230-570349 (Counterclockwise)
Preceding gene: 71906151
Following gene: 71906149
Centisome position: 12.69
GC content: 64.4
Gene sequence:
>882_bases ATGGTCCGCATCCAGTTCGCAATCGATCTGCATTATGAACTGAACTATCCGGGCGCCGATTTCGTTTTCAACATCCACGC GGCACAGACCGCCAGCCAGGCCATCATCAGCGAAAACCTGGTGGTCAGCCAGCAGGTACCGACGGTCATCCAGACCGCCC CGGCCACGCACGCCCGCTTCCTGCGCCTGACCGGTGCCCCCGGCCCACTGCACATCAGCTATCAGGCGCTGGTCGATATC GACCACCATATCGGCAACCCGGACCTGATTCCGGAAACGCCGATCGGCCAATTGCCGCTCTCGGTACTGAACTACATCTA CCCCAGCCGCTACTGCCAGTCCGACCGCCTCGCCAATCTTTCGATGAGCGAATTCGGCCATCTGCCCAAGGGCTATCGGC GCGTCGAAGCCATCCGCAACTGGGTGAACAAGCACGTCGCCTTCCGCAGCAACACCACGAGCTCGACCACATCAGCGCTC GATACGGTGACCGATCGCGTCGGCGTCTGCCGCGACTTCGCGCACCTGATGATCGCCATCTGCCGCGCGCTGAGCATTCC GGCCCGCTTCACGACCGGGATCGACTACGGCGCCGATCCGGCCCTCGGCCCGACCGACTTCCATGCCTACGTCGAGGTCT TCCTCGGCGGTCGCTGGTACATGTTCGACCCGTCCGGCACCGCCATTCCGATGGGCTTCGTCCGCCTGGGTACCGGGCGC GACGCGGCCGATGTGTCCTACGCCACCATCTTCGGCAGCGTCTCCTCGCCGCCGCCGTTGATTTCCGTCACTGCCATCAC CGAACCCGGCCGCCCGTGGGAATTACCCCGCCACCGGCCGGAGGCGATTTCGACCGATGCTTCACCGGTCGACGCCGGCT AA
Upstream 100 bases:
>100_bases GCCGTACTGATCATTTCCCCGTCGCAAAGCGCCGTTTTATTGCTCGCTTGAGCGCTTCCGGCTTTTCCGGACTTCCGGAT GCCGTCACTTTGGGGAATAC
Downstream 100 bases:
>100_bases ACCCCATTTTTCAATTACTGGAGAAAACACTTGGCTAAAGAAGAACTACTTGAAATGCAAGGCGTCGTGAACGACGTCCT CCCCGACACCCGCTTCCGCG
Product: transglutaminase-like
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase; Transglutaminase/Protease-Like Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Transglutaminase/Protease; Transglutaminase-Like Cysteine Protease; IMP Dehydrogenase; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase-Like S Cysteine Protease; Cystein Protease
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG
Sequences:
>Translated_293_residues MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG >Mature_293_residues MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARFLRLTGAPGPLHISYQALVDI DHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANLSMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSAL DTVTDRVGVCRDFAHLMIAICRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31986; Mature: 31986
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARF CEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEE LRLTGAPGPLHISYQALVDIDHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANL EEEECCCCCEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSALDTVTDRVGVCRDFAHLMIAI CHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR HHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCEEEEEEEEECCCC DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVRIQFAIDLHYELNYPGADFVFNIHAAQTASQAIISENLVVSQQVPTVIQTAPATHARF CEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCCEEE LRLTGAPGPLHISYQALVDIDHHIGNPDLIPETPIGQLPLSVLNYIYPSRYCQSDRLANL EEEECCCCCEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SMSEFGHLPKGYRRVEAIRNWVNKHVAFRSNTTSSTTSALDTVTDRVGVCRDFAHLMIAI CHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRALSIPARFTTGIDYGADPALGPTDFHAYVEVFLGGRWYMFDPSGTAIPMGFVRLGTGR HHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHEECCEEEEECCCCCEEEEEEEEECCCC DAADVSYATIFGSVSSPPPLISVTAITEPGRPWELPRHRPEAISTDASPVDAG CCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA