Click here to switch to the map view.

The map label for this gene is kch [C]

Identifier: 71906138

GI number: 71906138

Start: 559689

End: 561380

Strand: Reverse

Name: kch [C]

Synonym: Daro_0498

Alternate gene names: 71906138

Gene position: 561380-559689 (Counterclockwise)

Preceding gene: 71906139

Following gene: 71906127

Centisome position: 12.47

GC content: 62.71

Gene sequence:

>1692_bases
GTGAACAGCGCTTTCTTCCTTGTCCTCCGGCGCATGCGGGCGCCGATCATTGTGCTGATCGTCATCTATGCGATCTCGGT
GGTCGGTCTGACGCTGGTGCCCGGCGTCGATGCCGAAAGCAGGATGACGGCACCGCTCAGCTTCTTCCACGCCTTCTATT
TCATCAGCTACACCGCAACCACCATCGGCTTCGGCGAGATTCCCGCTGCCTTTTCCGATGCCCAGCGCCTGTGGGTCACC
GTCTGCATCTACCTGACCGTCGTCGGCTGGTCCTATTCGGTGGTCACGCTGATTGCCCTGCTGCAGGACAAGGGTTTCCA
GAACACGCTGACCGCCAACCGCTTCACGCGTCGGGTTCGGCAGATCAAGCAGGACTTCTACCTGATTTGCGGTTGCGGCG
AGACGGGCAGCCTGATCGCCCGGACCTTCGACCAGATCGGCCAGGCTTTCGTCGTCATCGAGAAAGACGAACTGCGGGTC
GAAGAACTCGACCTGCTGGATTTCAAGACCGACACCCCCGCCTTTGCCGCCGATGCCCGCCAGCCCGACAACTTGCAACT
GGCCGGTCTGATGCACCCGAAATGCCGCGGCGTACTGGCCATCACCAACGACGAGCAGGCCAATCTGGCCATCGCCATTG
CCGTTCGCCTGCTCAACCCGGACATTCCGGTCATCGCCCGCGCCGAACAGGGCAGCATCGCCGCCAACATGGCCTCCTTC
GGCACCGACTTCATCATCAATCCCTATGAACGTTTTGCTGACCGGCTGGCGCTGGCGGTTTCCTCCCCCGAACGTTTTCG
CCTGATCGAGTTGCTGACCAGCCTGCCCGAATCGCCGATCCCGGAAACCCTGCGCCCGCCGCGCGGCCACTGGATACTCT
GCGGCTACGGCCGTTTCGGGCATGCCGTCGCCGAGCGACTGCGCGGCACCGGCATCACGCTGACCATCATCGACCCAAGC
GCCCCCGATGCCAACCGCGAGATTGCCGGCGACGGCACGGAAGCCAGCACCCTCCACCAGGCCGGCATCGAGCACGCGAC
GGGGATCGTCGCCGGCAGCCGCAACGACATCAACAATCTCTCGACCGCCATCACCGCCAGCGAGATCAAGCCCGATCTGT
TTGTCGTCGCCCGCCAGAACCATGCCGCCAATAGCGCGCTATTCACCGCCTTTGACGCGGATTTCACCGTCTTGCCCAGT
CGCATCATCGCCCAGGAATGCATTGCCATCCTGACGGCGCCACTGCTGGCCCGTTTTCTCGATCACGTCAGCCAACTGGC
GGAGAGCCACTGCGAACAACTGGTCAAACGCCTGCAAGAAGCCAGCGGCGGCCTGACGCCAGTCATCTGGGACATTCGTC
TCAATGCCGCCGAAGCCCCGGCCACCTGGCAGGCGCTGATGCACGACCGGAAAATCCGCCTCGGCGAAATCCTGATCGAT
GGCGCTGACCGCGACAGTCGCCTGCCCGCGGTCCCATTGCTGATCGAACGCGGCCGCGACTACGTTCTGCTTCCGGCCGA
TGACTTCCGGCTCGAAGCGGGTGACCAACTACTGTTCGCCAGTGCCTTATCCTCCCAACGCAAGCTTGAGCTGACCCTGA
AAAATGCCAATGAACTCGACTACGTGCTCAGCGGCCAGGAAAACTCCGGCAGCCTGCTCGGCAAGCTACTGAAAGCCAAC
TCGCAGCCCTGA

Upstream 100 bases:

>100_bases
TTCCCTTTCTGGCGGTGCGCTATTCGCCAATATCGTCTCGGTCATCATCCTGATCGTCGAAACGGTCATGCTGCGCCGCT
AGGCCAGCCGGGAGCCGCGC

Downstream 100 bases:

>100_bases
ATCGGGAAGCGCACTTTGAGCTCCTTCAAGCAGCCAGCACCCGGCGCAAGCCGCGCATCAGGGTGCCAAGTCCGGGCAGC
TTCATGTATAGCTCTTCGCC

Product: TrkA-N

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK1 [H]

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MNSAFFLVLRRMRAPIIVLIVIYAISVVGLTLVPGVDAESRMTAPLSFFHAFYFISYTATTIGFGEIPAAFSDAQRLWVT
VCIYLTVVGWSYSVVTLIALLQDKGFQNTLTANRFTRRVRQIKQDFYLICGCGETGSLIARTFDQIGQAFVVIEKDELRV
EELDLLDFKTDTPAFAADARQPDNLQLAGLMHPKCRGVLAITNDEQANLAIAIAVRLLNPDIPVIARAEQGSIAANMASF
GTDFIINPYERFADRLALAVSSPERFRLIELLTSLPESPIPETLRPPRGHWILCGYGRFGHAVAERLRGTGITLTIIDPS
APDANREIAGDGTEASTLHQAGIEHATGIVAGSRNDINNLSTAITASEIKPDLFVVARQNHAANSALFTAFDADFTVLPS
RIIAQECIAILTAPLLARFLDHVSQLAESHCEQLVKRLQEASGGLTPVIWDIRLNAAEAPATWQALMHDRKIRLGEILID
GADRDSRLPAVPLLIERGRDYVLLPADDFRLEAGDQLLFASALSSQRKLELTLKNANELDYVLSGQENSGSLLGKLLKAN
SQP

Sequences:

>Translated_563_residues
MNSAFFLVLRRMRAPIIVLIVIYAISVVGLTLVPGVDAESRMTAPLSFFHAFYFISYTATTIGFGEIPAAFSDAQRLWVT
VCIYLTVVGWSYSVVTLIALLQDKGFQNTLTANRFTRRVRQIKQDFYLICGCGETGSLIARTFDQIGQAFVVIEKDELRV
EELDLLDFKTDTPAFAADARQPDNLQLAGLMHPKCRGVLAITNDEQANLAIAIAVRLLNPDIPVIARAEQGSIAANMASF
GTDFIINPYERFADRLALAVSSPERFRLIELLTSLPESPIPETLRPPRGHWILCGYGRFGHAVAERLRGTGITLTIIDPS
APDANREIAGDGTEASTLHQAGIEHATGIVAGSRNDINNLSTAITASEIKPDLFVVARQNHAANSALFTAFDADFTVLPS
RIIAQECIAILTAPLLARFLDHVSQLAESHCEQLVKRLQEASGGLTPVIWDIRLNAAEAPATWQALMHDRKIRLGEILID
GADRDSRLPAVPLLIERGRDYVLLPADDFRLEAGDQLLFASALSSQRKLELTLKNANELDYVLSGQENSGSLLGKLLKAN
SQP
>Mature_563_residues
MNSAFFLVLRRMRAPIIVLIVIYAISVVGLTLVPGVDAESRMTAPLSFFHAFYFISYTATTIGFGEIPAAFSDAQRLWVT
VCIYLTVVGWSYSVVTLIALLQDKGFQNTLTANRFTRRVRQIKQDFYLICGCGETGSLIARTFDQIGQAFVVIEKDELRV
EELDLLDFKTDTPAFAADARQPDNLQLAGLMHPKCRGVLAITNDEQANLAIAIAVRLLNPDIPVIARAEQGSIAANMASF
GTDFIINPYERFADRLALAVSSPERFRLIELLTSLPESPIPETLRPPRGHWILCGYGRFGHAVAERLRGTGITLTIIDPS
APDANREIAGDGTEASTLHQAGIEHATGIVAGSRNDINNLSTAITASEIKPDLFVVARQNHAANSALFTAFDADFTVLPS
RIIAQECIAILTAPLLARFLDHVSQLAESHCEQLVKRLQEASGGLTPVIWDIRLNAAEAPATWQALMHDRKIRLGEILID
GADRDSRLPAVPLLIERGRDYVLLPADDFRLEAGDQLLFASALSSQRKLELTLKNANELDYVLSGQENSGSLLGKLLKAN
SQP

Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003280
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 61628; Mature: 61628

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAFFLVLRRMRAPIIVLIVIYAISVVGLTLVPGVDAESRMTAPLSFFHAFYFISYTAT
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHH
TIGFGEIPAAFSDAQRLWVTVCIYLTVVGWSYSVVTLIALLQDKGFQNTLTANRFTRRVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QIKQDFYLICGCGETGSLIARTFDQIGQAFVVIEKDELRVEELDLLDFKTDTPAFAADAR
HHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHEEECCCCCCCCCCCCC
QPDNLQLAGLMHPKCRGVLAITNDEQANLAIAIAVRLLNPDIPVIARAEQGSIAANMASF
CCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHC
GTDFIINPYERFADRLALAVSSPERFRLIELLTSLPESPIPETLRPPRGHWILCGYGRFG
CCCCEECHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHH
HAVAERLRGTGITLTIIDPSAPDANREIAGDGTEASTLHQAGIEHATGIVAGSRNDINNL
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCHHHHCEEEECCCCCCHHH
STAITASEIKPDLFVVARQNHAANSALFTAFDADFTVLPSRIIAQECIAILTAPLLARFL
HHHEEHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DHVSQLAESHCEQLVKRLQEASGGLTPVIWDIRLNAAEAPATWQALMHDRKIRLGEILID
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEE
GADRDSRLPAVPLLIERGRDYVLLPADDFRLEAGDQLLFASALSSQRKLELTLKNANELD
CCCCCCCCCCCHHHHHCCCCEEEECCCCCEECCCCCEEEHHHHCCCCEEEEEECCCCCCE
YVLSGQENSGSLLGKLLKANSQP
EEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSAFFLVLRRMRAPIIVLIVIYAISVVGLTLVPGVDAESRMTAPLSFFHAFYFISYTAT
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHH
TIGFGEIPAAFSDAQRLWVTVCIYLTVVGWSYSVVTLIALLQDKGFQNTLTANRFTRRVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QIKQDFYLICGCGETGSLIARTFDQIGQAFVVIEKDELRVEELDLLDFKTDTPAFAADAR
HHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHEEECCCCCCCCCCCCC
QPDNLQLAGLMHPKCRGVLAITNDEQANLAIAIAVRLLNPDIPVIARAEQGSIAANMASF
CCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHC
GTDFIINPYERFADRLALAVSSPERFRLIELLTSLPESPIPETLRPPRGHWILCGYGRFG
CCCCEECHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHH
HAVAERLRGTGITLTIIDPSAPDANREIAGDGTEASTLHQAGIEHATGIVAGSRNDINNL
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCHHHHCEEEECCCCCCHHH
STAITASEIKPDLFVVARQNHAANSALFTAFDADFTVLPSRIIAQECIAILTAPLLARFL
HHHEEHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DHVSQLAESHCEQLVKRLQEASGGLTPVIWDIRLNAAEAPATWQALMHDRKIRLGEILID
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEE
GADRDSRLPAVPLLIERGRDYVLLPADDFRLEAGDQLLFASALSSQRKLELTLKNANELD
CCCCCCCCCCCHHHHHCCCCEEEECCCCCEECCCCCEEEHHHHCCCCEEEEEECCCCCCE
YVLSGQENSGSLLGKLLKANSQP
EEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]