| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906093
Identifier: 71906093
GI number: 71906093
Start: 496216
End: 496554
Strand: Reverse
Name: 71906093
Synonym: Daro_0453
Alternate gene names: NA
Gene position: 496554-496216 (Counterclockwise)
Preceding gene: 71906101
Following gene: 71906085
Centisome position: 11.03
GC content: 58.41
Gene sequence:
>339_bases ATGGCAACGAGTTGCAACCTGGCCGATCGGCAATGCACGCCATGCGAAGGCGGCATTGCTCCGCTGGAAAACTCTGTCGC CGCCGTCATGCTGGACACGCTGCCCGGCTGGACACTCGACGGGCAGCGACTGGACAAGACTTATGTTTTTCGTAATCACT ACGAGGCGATGGCCTTCGTTAACGCCATCGCCTGGGTTTCGCACCGGGAGAATCATCACCCGGAACTGATCGTGGGTTAC AAGGATGTCCGCGTCCGTTACTGGACGCATGCCATCGGCGGCCTGTCGGAAAACGACTTCATCTGCGCCGCCAAGCTGGA GAAACTGCTGGAAATCTGA
Upstream 100 bases:
>100_bases TTCTAGCGCACTCCATTTCGCTTATCAAAGCAGCGAGCGCACAGGAACCAAGTTGGCACTTCGCAATCTGATTTCGGAGG ATTCAACAGGAGCAATCACC
Downstream 100 bases:
>100_bases CGCAGGCTGCCGACGACAAACCGGAATGTGTTCAGGCCTGCCCGGCTCCGGCCACCGCCCGCCGCAGGCGATCGGCAACG GCAGCCCAAGCTGAGTCTTC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MATSCNLADRQCTPCEGGIAPLENSVAAVMLDTLPGWTLDGQRLDKTYVFRNHYEAMAFVNAIAWVSHRENHHPELIVGY KDVRVRYWTHAIGGLSENDFICAAKLEKLLEI
Sequences:
>Translated_112_residues MATSCNLADRQCTPCEGGIAPLENSVAAVMLDTLPGWTLDGQRLDKTYVFRNHYEAMAFVNAIAWVSHRENHHPELIVGY KDVRVRYWTHAIGGLSENDFICAAKLEKLLEI >Mature_111_residues ATSCNLADRQCTPCEGGIAPLENSVAAVMLDTLPGWTLDGQRLDKTYVFRNHYEAMAFVNAIAWVSHRENHHPELIVGYK DVRVRYWTHAIGGLSENDFICAAKLEKLLEI
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_DECAR (Q47IX1)
Other databases:
- EMBL: CP000089 - RefSeq: YP_283680.1 - ProteinModelPortal: Q47IX1 - SMR: Q47IX1 - STRING: Q47IX1 - GeneID: 3568365 - GenomeReviews: CP000089_GR - KEGG: dar:Daro_0453 - NMPDR: fig|159087.4.peg.35 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: AKTAQLY - BioCyc: DARO159087:DARO_0453-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 12589; Mature: 12458
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSCNLADRQCTPCEGGIAPLENSVAAVMLDTLPGWTLDGQRLDKTYVFRNHYEAMAFV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH NAIAWVSHRENHHPELIVGYKDVRVRYWTHAIGGLSENDFICAAKLEKLLEI HHHHHHHCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure ATSCNLADRQCTPCEGGIAPLENSVAAVMLDTLPGWTLDGQRLDKTYVFRNHYEAMAFV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH NAIAWVSHRENHHPELIVGYKDVRVRYWTHAIGGLSENDFICAAKLEKLLEI HHHHHHHCCCCCCCEEEEECCCEEEEEEEHHHCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA